Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_G05
(1289 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 38 0.003
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.086
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.15
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.20
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.26
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 29 1.1
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 1.8
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 3.2
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 28 3.2
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 9.8
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 37.9 bits (84), Expect = 0.003
Identities = 20/43 (46%), Positives = 20/43 (46%)
Frame = -1
Query: 875 PXGXEXGPGXPXXGXGGXXGGXXGGFXGGXXRXXXXPXGGGPP 747
P G E GPG G GG GG GGF GG P G G P
Sbjct: 230 PGGFEGGPGGFGGGPGGFGGGL-GGFGGGPGGFGGGPGGHGGP 271
Score = 31.1 bits (67), Expect = 0.35
Identities = 24/83 (28%), Positives = 24/83 (28%)
Frame = -2
Query: 979 GGXGAPXPXXGGGRPPPXPXXTPPXXXXGXGAPPXPXGXKXAXDXXXGAXGGXXGGXXGG 800
G G GGG P P G G G G G GG GG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Query: 799 XXGXXXGXXXXPGGGXPPXXGGG 731
G G GG P GGG
Sbjct: 244 PGGFGGGLGGF--GGGPGGFGGG 264
Score = 28.3 bits (60), Expect = 2.4
Identities = 23/84 (27%), Positives = 23/84 (27%)
Frame = -1
Query: 536 GXXGGGRGXGPKSXXPXPXGGAXXXXXXXXXXXXXXPEXKXEXPGGGXSGXGXLXGGPKX 357
G GG G G P P G PGG G G GGP
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 356 XXGAXXXQXXXGXPXXXXGGGPXG 285
G G GGGP G
Sbjct: 247 FGGGL---GGFGGGPGGFGGGPGG 267
Score = 28.3 bits (60), Expect = 2.4
Identities = 22/67 (32%), Positives = 22/67 (32%), Gaps = 5/67 (7%)
Frame = -2
Query: 889 GAPPXPXGXKX-----AXDXXXGAXGGXXGGXXGGXXGXXXGXXXXPGGGXPPXXGGGFX 725
G PP P G G GG GG GG G G PGG G G
Sbjct: 199 GPPPGPGGFGGFGGFGGEGHHHGGHGGFGGG-PGGFEGGPGGFGGGPGGFGGGLGGFGGG 257
Query: 724 EXXXGGG 704
GGG
Sbjct: 258 PGGFGGG 264
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.1 bits (72), Expect = 0.086
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 5/50 (10%)
Frame = +3
Query: 705 PPPXXXSKNP-----PPXXGGXPPPGXXXXPXXXPXKPPXXPPXXPPXAP 839
PPP S P PP PPP P P P P PP P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 3/46 (6%)
Frame = +3
Query: 711 PXXXSKNPPPXXGGXP---PPGXXXXPXXXPXKPPXXPPXXPPXAP 839
P S PPP P PP P P PP PP AP
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 26.6 bits (56), Expect = 7.4
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 3/47 (6%)
Frame = +3
Query: 705 PPPXXXSKNPP---PXXGGXPPPGXXXXPXXXPXKPPXXPPXXPPXA 836
PP PP P PPP P P K P P PP A
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAP-PIPSKAPPIPSSLPPPA 175
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.15
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -3
Query: 966 PPPPXXGGXAPPXXXXXPPXAXXXGXGPPPXP 871
PP P GG PP PP G GPPP P
Sbjct: 753 PPAPIMGGPPPP-----PPPPGVAGAGPPPPP 779
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +3
Query: 705 PPPXXXSKNPPPXXGGXPPPGXXXXPXXXPXKPPXXPPXXPPXAP 839
PPP P P PPP P PP PP P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = -3
Query: 966 PPPPXX--GGXAPPXXXXXPPXAXXXGXGPPPXPRGXXG 856
PPPP AP PP G PPP P G G
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAG 772
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 793 PXNPPXXPPXXPPXPXXGNPGPXSXPXGRGGPLP 894
P P P PP P G P P P G G P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP 775
Score = 27.9 bits (59), Expect = 3.2
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +3
Query: 705 PPPXXXSKNPP-PXXGGXPPPGXXXXPXXXPXKPPXXPPXXP 827
P P PP P GG PPP P PP PP P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPP--PPPPGVAGAGPPPPPPPPP 783
Score = 27.5 bits (58), Expect = 4.3
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +2
Query: 695 PXXPPPXXTFXKPXAXXXGXPPPXXXXXPGXXPXXTPPXXPPXXPPGP 838
P PPP P PPP G P PP PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMG-GPPPPPPPPGVAGAGPPPP 778
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = -3
Query: 966 PPPPXXGGXAPPXXXXXPPXAXXXGXG-PPPXPRGXXGPXI 847
PPPP G PP PP G P P+ P I
Sbjct: 765 PPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEPKI 805
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.9 bits (69), Expect = 0.20
Identities = 27/104 (25%), Positives = 27/104 (25%), Gaps = 6/104 (5%)
Frame = +3
Query: 711 PXXXSKNPPPXXGGXPP---PGXXXXPXXXPXK--PPXXPPXXPPXAPXXXSXAXFXPXG 875
P P P G PP P P P PP P P P A P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 876 XGGAPXPXXXXGGVXXGXGGGRPP-PXXGXGAPXPPGXXXXXXP 1004
G P P G PP P AP P P
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Score = 29.9 bits (64), Expect = 0.80
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -2
Query: 982 PGGXGAPXPXXGGGRPPPXPXXTPPXXXXGXGAPPXP 872
P P P P P P TPP GAP P
Sbjct: 1027 PSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAP 1063
Score = 29.9 bits (64), Expect = 0.80
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Frame = -2
Query: 982 PGGXGAPXPXXGGGRPP-PXPXXTPPXXXXGXGAPPXP 872
P P P G PP P P PP G PP P
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVP 1211
Score = 29.1 bits (62), Expect = 1.4
Identities = 23/95 (24%), Positives = 23/95 (24%), Gaps = 3/95 (3%)
Frame = +3
Query: 705 PPPXXXSKNPPPXXGGXP---PPGXXXXPXXXPXKPPXXPPXXPPXAPXXXSXAXFXPXG 875
P P P P P P G P PP P P P A P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Query: 876 XGGAPXPXXXXGGVXXGXGGGRPPPXXGXGAPXPP 980
G P GV PP PP
Sbjct: 1175 SSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -2
Query: 982 PGGXGAPXPXXGGGRPPPXPXXTPPXXXXGXGAPPXP 872
P P P G P P P P GAPP P
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Frame = -2
Query: 982 PGGXGAPXPXXGGGRPP-PXPXXTPPXXXXGXGAPPXP 872
P P P G PP P P PP G PP P
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -2
Query: 964 PXPXXGGGRPPPXPXXTPPXXXXGXGAPPXP 872
P P G P P P P GAPP P
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = -2
Query: 958 PXXGGGRPPPXPXXTPPXXXXGXGAPPXP 872
P G P P P PP APP P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Score = 26.6 bits (56), Expect = 7.4
Identities = 22/74 (29%), Positives = 22/74 (29%), Gaps = 10/74 (13%)
Frame = +3
Query: 705 PPPXXXSKNPP-PXXGGXPPP---GXXXXPXXXPXKPPXXP------PXXPPXAPXXXSX 854
P P SK PP P PP P P P P P PP P S
Sbjct: 1013 PVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSE 1072
Query: 855 AXFXPXGXGGAPXP 896
P G P P
Sbjct: 1073 IPSIPAPSGAPPVP 1086
Score = 26.6 bits (56), Expect = 7.4
Identities = 21/91 (23%), Positives = 23/91 (25%)
Frame = +3
Query: 705 PPPXXXSKNPPPXXGGXPPPGXXXXPXXXPXKPPXXPPXXPPXAPXXXSXAXFXPXGXGG 884
PP S PP P G P PP PP P P P
Sbjct: 1159 PPVPKPSVAAPPVPA--PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTA 1216
Query: 885 APXPXXXXGGVXXGXGGGRPPPXXGXGAPXP 977
P P G + PP + P
Sbjct: 1217 PPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 26.2 bits (55), Expect = 9.8
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Frame = -2
Query: 982 PGGXGAPXPXXGGGRPP-PXPXXTPPXXXXGXGAPPXP 872
P G P P PP P P PP APP P
Sbjct: 1136 PSG-APPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.26
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +3
Query: 705 PPPXXXSKNPPPXXGGXPPPGXXXXPXXXPXKPPXXPPXXPPXAP 839
PP PPP PPP P P PP PP AP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP--PPLPASSAP 1741
Score = 29.5 bits (63), Expect = 1.1
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = +3
Query: 705 PPPXXXSKNPPPXXGGXPPPGXXXXPXXXPXKP-PXXPPXXPPXAPXXXSXAXFXP 869
PP S PP PPP P P P PP PP P S A P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP-PPLPASSAPSVP 1744
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +3
Query: 705 PPPXXXSKNPPPXXGGXPPPGXXXXPXXXPXKPPXXPPXXPPXAP 839
PPP +N PP PP P + P P P AP
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPPVQAYPQAP 250
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 28.7 bits (61), Expect = 1.8
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 873 PRGXXGPXIXXXGPGGXXGGXXGGVXXGXXPGXXXXXGGGXPXKXAXGFXXVXXGG 706
P G G G GG GG G G G GGG GF GG
Sbjct: 134 PAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.9 bits (59), Expect = 3.2
Identities = 28/140 (20%), Positives = 35/140 (25%), Gaps = 2/140 (1%)
Frame = +1
Query: 475 PPXGXGXX--LLGPXPLPPPXXPXXRLXXXXXXXXXXXXXXXXFPPXRGXPXXKXXXAKX 648
PP G G L P P PP + P G ++
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRA 384
Query: 649 PXGAXPPKGXXXXXFSXGPPPXXDXXKTXRXFXGGPPPXGXXXXRXXPPXNPPXXPPXXP 828
P + PP + +T PP PP PP P P
Sbjct: 385 VSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444
Query: 829 PXPXXGNPGPXSXPXGRGGP 888
P P + P G P
Sbjct: 445 AAPPLPPSAPIAPPLPAGMP 464
Score = 26.6 bits (56), Expect = 7.4
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Frame = +1
Query: 757 PPXGXXXXRXXPPX-NPPXXPPXXPPXPXXGNPGPXSXPXG--RGGPLP 894
PP G PP PP PP PP P S P G PLP
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPS--APPSLPMGAPAAPPLP 450
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 27.9 bits (59), Expect = 3.2
Identities = 22/69 (31%), Positives = 23/69 (33%), Gaps = 5/69 (7%)
Frame = -1
Query: 893 GRGPPLPXGXEXGPGXPXXGXGGXXGGXXGG-----FXGGXXRXXXXPXGGGPPXXXRXV 729
G P P G E GPG G GG G GG F G P V
Sbjct: 72 GNAAPPPPGAEGGPG---AGFGGFPGAGPGGARTFHFNMGGPGGAQFFSASDPNDIFERV 128
Query: 728 FXXSXXGGG 702
F + GGG
Sbjct: 129 FGHAFAGGG 137
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +1
Query: 790 PPXNPPXXPPXXPPXPXXGNPGPXSXPXGR 879
P + P PP P P G P S P R
Sbjct: 100 PSYSQPSQPPKEPALPSRGTPSLPSRPGSR 129
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,645,155
Number of Sequences: 5004
Number of extensions: 36533
Number of successful extensions: 304
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 703461012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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