Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_G03
         (1289 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    32   0.032
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            32   0.042
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   0.84 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   1.6  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    26   2.1  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   6.3  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 32.3 bits (70), Expect = 0.032
 Identities = 27/102 (26%), Positives = 31/102 (30%)
 Frame = +2

Query: 722  PXKXPXXQXPPXGPXPXXGXXGGVXPXAPPPXXXLXKXXPPVXGGQPXXGXXKXPGVXPX 901
            P   P    P   P    G   G+ P  PP    + +  PP+ G  P        G    
Sbjct: 221  PPGVPMPMRPQMPPGAVPGMQPGMQPR-PPSAQGMQR--PPMMGQPPPIRPPNPMGGPRP 277

Query: 902  XTPPXGPPXSXPXXXXGXPXPPXPPXGEXGGPXXXPPXGGXP 1027
               P     S      G   PP PP    GG    PP G  P
Sbjct: 278  QISPQNSNLSG-GMPSGMVGPPRPPMPMQGGAPGGPPQGMRP 318



 Score = 27.9 bits (59), Expect = 0.68
 Identities = 15/41 (36%), Positives = 17/41 (41%)
 Frame = +1

Query: 802 GPPPXXXPPKXRPPSXGGXTPXXXXKXPXGXPXXNPPXGPP 924
           GPP    P + +PP  GG  P      P G P    P  PP
Sbjct: 199 GPPRTGTPTQPQPPRPGGMYP-----QPPGVPMPMRPQMPP 234



 Score = 27.9 bits (59), Expect = 0.68
 Identities = 15/40 (37%), Positives = 16/40 (40%)
 Frame = -1

Query: 689 PPXGGGNXSPXPKXRGXGXXGGGTGXGPXXXTPXPXGGGG 570
           PP GG   +P P        GGG   G       P GGGG
Sbjct: 495 PPPGGRPNAPNPS--SAVTPGGGRAEGDKVTFQIPNGGGG 532



 Score = 25.8 bits (54), Expect = 2.7
 Identities = 26/108 (24%), Positives = 27/108 (25%)
 Frame = +2

Query: 704  PXXXGXPXKXPXXQXPPXGPXPXXGXXGGVXPXAPPPXXXLXKXXPPVXGGQPXXGXXKX 883
            P   G        Q PP  P       GG  P   P    L    P    G P       
Sbjct: 249  PSAQGMQRPPMMGQPPPIRPP---NPMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQ 305

Query: 884  PGVXPXXTPPXGPPXSXPXXXXGXPXPPXPPXGEXGGPXXXPPXGGXP 1027
             G      PP G   +      G P    PP G        PP    P
Sbjct: 306  GGAPGG--PPQGMRPNFYNRPMGDPQTSRPPSGNDNMGGGPPPSSATP 351


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 31.9 bits (69), Expect = 0.042
 Identities = 15/31 (48%), Positives = 15/31 (48%)
 Frame = -2

Query: 1072 PPPPXXGGGPXXPXXGXPXXGGXXXRXPPLP 980
            PPPP   G P  P  G P  GG     PPLP
Sbjct: 585  PPPPPPMGPPPSPLAGGP-LGGPAGSRPPLP 614



 Score = 31.1 bits (67), Expect = 0.073
 Identities = 23/75 (30%), Positives = 25/75 (33%)
 Frame = -3

Query: 558 GKXPPPPPGXGXXKGXPXXXXXXXXXXXRGPKXXKXXPISPKXPFXPXLXXGGGPXXPXX 379
           G  PPPPPG G     P           R P      P++P     P     G P  P  
Sbjct: 529 GPPPPPPPG-GAVLNIPPQFLPPPLNLLRAP----FFPLNPAQLRFP----AGFPNLPNA 579

Query: 378 XXXXGPXXPPPKGGP 334
                P  PPP G P
Sbjct: 580 QPPPAPPPPPPMGPP 594



 Score = 27.5 bits (58), Expect = 0.90
 Identities = 25/88 (28%), Positives = 28/88 (31%), Gaps = 1/88 (1%)
 Frame = +2

Query: 752  PXGPXPXXGXXGGVXPX-APPPXXXLXKXXPPVXGGQPXXGXXKXPGVXPXXTPPXGPPX 928
            P  P P  G    + P   PPP   L     P+   Q        P + P   PP  PP 
Sbjct: 530  PPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAG-FPNL-PNAQPPPAPPP 587

Query: 929  SXPXXXXGXPXPPXPPXGEXGGPXXXPP 1012
              P      P P     G  GGP    P
Sbjct: 588  PPPM----GPPPSPLAGGPLGGPAGSRP 611



 Score = 26.2 bits (55), Expect = 2.1
 Identities = 22/82 (26%), Positives = 24/82 (29%), Gaps = 3/82 (3%)
 Frame = +2

Query: 785  GGVXPXAPPPXXXLXKXXPPVXGGQPXXGXXKXPGVXPXXTPPXGPPXSXPXXXXGXPXP 964
            G + P  PPP        PP     P     + P   P        P   P      P P
Sbjct: 526  GPLGPPPPPPPGGAVLNIPPQFL-PPPLNLLRAP-FFPLNPAQLRFPAGFPNLPNAQPPP 583

Query: 965  ---PXPPXGEXGGPXXXPPXGG 1021
               P PP G    P    P GG
Sbjct: 584  APPPPPPMGPPPSPLAGGPLGG 605



 Score = 25.4 bits (53), Expect = 3.6
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +3

Query: 1068 GGXQXPPXXPXXGGXXPGKXPXXXPPP 1148
            GG   PP  P  GG      P   PPP
Sbjct: 525  GGPLGPPPPPPPGGAVLNIPPQFLPPP 551



 Score = 25.4 bits (53), Expect = 3.6
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 571 PPPPXGXGVXFXGPXPVPPP 630
           PPPP G  V    P  +PPP
Sbjct: 532 PPPPPGGAVLNIPPQFLPPP 551


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 2.7
 Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
 Frame = -1

Query: 644 GXGXXGGGT--GXGPXXXTPXPXGGGG 570
           G G  GGG   G G     P P GGGG
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGGGG 229



 Score = 25.0 bits (52), Expect = 4.8
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -3

Query: 1026 GXPPXGGXXXGPPXSPXGGXGGXG 955
            G P  GG   G P  P GG GG G
Sbjct: 210  GAPGGGGGSSGGP-GPGGGGGGGG 232



 Score = 24.6 bits (51), Expect = 6.3
 Identities = 13/34 (38%), Positives = 14/34 (41%)
 Frame = -3

Query: 1020 PPXGGXXXGPPXSPXGGXGGXGXPXXXXGXXXGG 919
            P  GG   G   +P GG G  G P    G   GG
Sbjct: 200  PGAGGGGSGG-GAPGGGGGSSGGPGPGGGGGGGG 232



 Score = 24.6 bits (51), Expect = 6.3
 Identities = 12/33 (36%), Positives = 12/33 (36%)
 Frame = +3

Query: 975  PXGXGGXLXXXPPXXGXPXXGXXGPPPXXGGGG 1073
            P   GG      P  G    G  GP    GGGG
Sbjct: 200  PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGG 232



 Score = 23.8 bits (49), Expect(2) = 0.84
 Identities = 23/99 (23%), Positives = 25/99 (25%), Gaps = 1/99 (1%)
 Frame = -1

Query: 1097 GXXXGXLXPPPPXXGGGAPXPXXGXXXXGGXXX-KXPPXPXRGXXXGXXXRXXXXXGXXG 921
            G   G + PP       AP         GG       P        G         G  G
Sbjct: 117  GASPGLVPPPQQQQQQQAPLGIPSVAHGGGSGAIHASPNAQNPSSGGRSSSGGGGGGGGG 176

Query: 920  GPXGGFXXGXPXGFXXXXXGVXPPXLGGRXXGGXSXGGG 804
            G  G F                 P  GG   GG + GGG
Sbjct: 177  GGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGG 215



 Score = 21.8 bits (44), Expect(2) = 0.84
 Identities = 16/48 (33%), Positives = 17/48 (35%)
 Frame = -1

Query: 752 GAXGXXXFSXGXPXFXGXPXSPPXGGGNXSPXPKXRGXGXXGGGTGXG 609
           GA G    S G P   G       GGG      + R     GGG G G
Sbjct: 210 GAPGGGGGSSGGPGPGGG-----GGGGGRDRDHRDRDREREGGGNGGG 252


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -1

Query: 680 GGGNXSPXPKXRGXGXXGGGTGXGPXXXTPXPXGGG 573
           GGG+  P  +  G G  G G G G         GGG
Sbjct: 539 GGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGG 574



 Score = 25.4 bits (53), Expect = 3.6
 Identities = 18/65 (27%), Positives = 21/65 (32%)
 Frame = -1

Query: 752  GAXGXXXFSXGXPXFXGXPXSPPXGGGNXSPXPKXRGXGXXGGGTGXGPXXXTPXPXGGG 573
            G  G    S G     G P      GG  +  P     G  GGG+  G    +    GGG
Sbjct: 815  GGGGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGG--GGSGGTSGGG 872

Query: 572  GXLXR 558
                R
Sbjct: 873  SSTTR 877


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 31/112 (27%), Positives = 31/112 (27%)
 Frame = -1

Query: 860 VXPPXLGGRXXGGXSXGGGPXXKPPXPXXFXXXXXXGAXGXXXFSXGXPXFXGXPXSPPX 681
           V P  L G    G     GP   P  P         G  G      G P        PP 
Sbjct: 53  VGPRGLTGHR--GEKGNSGPVGPPGAPGRDGMPGAPGLPGSKGVK-GDPGLS--MVGPPG 107

Query: 680 GGGNXSPXPKXRGXGXXGGGTGXGPXXXTPXPXGGGGXLXRXXPPPPPPXPG 525
             GN    P  RG     GG G       P   G  G       P PP  PG
Sbjct: 108 PKGN----PGLRGPKGERGGMGDRGDPGLPGSLGYPGEKGDLGTPGPPGYPG 155



 Score = 26.2 bits (55), Expect = 2.1
 Identities = 22/68 (32%), Positives = 23/68 (33%), Gaps = 2/68 (2%)
 Frame = +3

Query: 981  GXGGXLXXXPPXX-GXPXXGXXGPPPXXGGGGXQXPPXXPXXGGXXPGKXPXXXP-PPGK 1154
            G  G     PP   G P  G  GP    GG G +  P  P   G    K     P PPG 
Sbjct: 96   GDPGLSMVGPPGPKGNP--GLRGPKGERGGMGDRGDPGLPGSLGYPGEKGDLGTPGPPGY 153

Query: 1155 XXXFXPXG 1178
                 P G
Sbjct: 154  PGDVGPKG 161


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.6 bits (51), Expect = 6.3
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = -3

Query: 996 GPPXSPXGGXGGXGXPXXXXGXXXGGPXG 910
           GP  +P GG G  G P         GP G
Sbjct: 398 GPAGAPGGGEGRPGAPGPKGPRGYEGPQG 426


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 970,877
Number of Sequences: 2352
Number of extensions: 19038
Number of successful extensions: 111
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 148375161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)