Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_G01
         (1203 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061320-1|AAL28868.1|   65|Drosophila melanogaster LD23674p pro...    91   2e-18
AE014298-1341|AAF46503.2|   65|Drosophila melanogaster CG2998-PA...    91   2e-18
AE014297-4512|AAF56992.1|   64|Drosophila melanogaster CG15527-P...    83   6e-16
BT030166-1|ABN49305.1|   73|Drosophila melanogaster IP17744p pro...    42   0.002

>AY061320-1|AAL28868.1|   65|Drosophila melanogaster LD23674p
           protein.
          Length = 65

 Score = 91.5 bits (217), Expect = 2e-18
 Identities = 45/65 (69%), Positives = 49/65 (75%)
 Frame = -3

Query: 433 MDXPHVFARXVKVXGRTGFQGXCXQVKVEFIGXTXRQIIRXVKGPVRDGDILXXFEXERE 254
           MD P V+AR +KV GRTG QG C QVKVEF+G   RQIIR VKGPVR+GDIL   E ERE
Sbjct: 1   MDKPVVWARVMKVLGRTGSQGQCTQVKVEFLGEQNRQIIRNVKGPVREGDILTLLESERE 60

Query: 253 ARXLR 239
           AR LR
Sbjct: 61  ARRLR 65


>AE014298-1341|AAF46503.2|   65|Drosophila melanogaster CG2998-PA
           protein.
          Length = 65

 Score = 91.5 bits (217), Expect = 2e-18
 Identities = 45/65 (69%), Positives = 49/65 (75%)
 Frame = -3

Query: 433 MDXPHVFARXVKVXGRTGFQGXCXQVKVEFIGXTXRQIIRXVKGPVRDGDILXXFEXERE 254
           MD P V+AR +KV GRTG QG C QVKVEF+G   RQIIR VKGPVR+GDIL   E ERE
Sbjct: 1   MDKPVVWARVMKVLGRTGSQGQCTQVKVEFLGEQNRQIIRNVKGPVREGDILTLLESERE 60

Query: 253 ARXLR 239
           AR LR
Sbjct: 61  ARRLR 65


>AE014297-4512|AAF56992.1|   64|Drosophila melanogaster CG15527-PA
           protein.
          Length = 64

 Score = 83.4 bits (197), Expect = 6e-16
 Identities = 42/65 (64%), Positives = 47/65 (72%)
 Frame = -3

Query: 433 MDXPHVFARXVKVXGRTGFQGXCXQVKVEFIGXTXRQIIRXVKGPVRDGDILXXFEXERE 254
           MD P  +AR V++ GRTG QG C QV+VEF+G   RQIIR VKGPVR GDIL   E ERE
Sbjct: 1   MDKPQ-YARVVEILGRTGSQGQCTQVRVEFLGDQSRQIIRNVKGPVRVGDILSLLETERE 59

Query: 253 ARXLR 239
           AR LR
Sbjct: 60  ARRLR 64


>BT030166-1|ABN49305.1|   73|Drosophila melanogaster IP17744p
           protein.
          Length = 73

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 18/44 (40%), Positives = 27/44 (61%)
 Frame = -3

Query: 412 ARXVKVXGRTGFQGXCXQVKVEFIGXTXRQIIRXVKGPVRDGDI 281
           AR +K+  R G +G   +V+V+ +     Q +R VKGPVR GD+
Sbjct: 7   ARVIKILNRIGARGILTEVRVQLVDQPKMQFMRTVKGPVRLGDV 50


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,356,417
Number of Sequences: 53049
Number of extensions: 362595
Number of successful extensions: 466
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 460
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6376781865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)