Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_F24
(1135 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 211 2e-53
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 151 3e-35
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 126 1e-27
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 95 3e-18
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 78 5e-13
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 69 2e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 5e-09
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 62 2e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 4e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 58 4e-07
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 54 9e-06
UniRef50_Q51612 Cluster: Putative uncharacterized protein; n=3; ... 52 4e-05
UniRef50_A4LA78 Cluster: Putative uncharacterized protein; n=1; ... 46 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.006
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 42 0.022
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.068
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.12
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 35 3.4
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 35 4.5
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 7.8
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 7.8
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 211 bits (516), Expect = 2e-53
Identities = 97/107 (90%), Positives = 98/107 (91%)
Frame = +3
Query: 465 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 644
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 645 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFQP 785
CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPF P
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108
Score = 49.6 bits (113), Expect = 1e-04
Identities = 33/65 (50%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 655 RIPVRLSPFGKRGAFS*LTL*VSQFGVG-RSLQAGLCART-PRFSPTAAPYPVTIVLSPT 828
R+P PF R A+ L V RS T P FSPTAAPYPVTIVLSPT
Sbjct: 63 RLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSPT 122
Query: 829 R*DTT 843
R DTT
Sbjct: 123 RKDTT 127
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein -
Escherichia coli
Length = 84
Score = 151 bits (366), Expect = 3e-35
Identities = 67/79 (84%), Positives = 69/79 (87%)
Frame = +3
Query: 771 PPFQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISXARYVGGATEFLKWWPNYGYTXX 950
PP QPDRCALSGNYRLESNPVRHDLSPLAAATGNRIS ARYVGGATEFLKWWPNYGYT
Sbjct: 4 PPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRARYVGGATEFLKWWPNYGYTRR 63
Query: 951 TVFGIXXLXKPXXFXKKIG 1007
TVFGI L KP F K++G
Sbjct: 64 TVFGICALLKPVTFGKRVG 82
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 126 bits (303), Expect = 1e-27
Identities = 73/120 (60%), Positives = 78/120 (65%)
Frame = +3
Query: 297 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 476
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 477 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 656
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 95.1 bits (226), Expect = 3e-18
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +3
Query: 483 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 644
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 77.8 bits (183), Expect = 5e-13
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +2
Query: 623 VRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 733
+RSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 68.9 bits (161), Expect = 2e-10
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = -3
Query: 797 GAAVGLKRGVRAHSPAWSERPTPN*DTYSVSYEKAPRFPKGERRTGIR*AAGSEQESARG 618
G + +RGVRA+SPAWSERP P+ DT SVSYEKAPRFPKG++ + +G Q R
Sbjct: 19 GRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV---SGKRQGRNRR 75
Query: 617 SFQG 606
+ +G
Sbjct: 76 AHEG 79
Score = 50.0 bits (114), Expect = 1e-04
Identities = 36/95 (37%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = -2
Query: 852 VAISRVLPGWTQDDSYRIRRSGRAETGGSCTQPSLERTTYTELRYLQREL*ESATLPEGR 673
+A RV PGWTQDDSYR RS RAE G P+ ++ P+G+
Sbjct: 1 MAFLRVRPGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGK 60
Query: 672 KADRYPVSG-RVGTGERTRE-LPGGNAWYLYSPVG 574
KA++ VSG R G R E G + SPVG
Sbjct: 61 KAEQ--VSGKRQGRNRRAHEGAAGEKSPASLSPVG 93
Score = 48.8 bits (111), Expect = 3e-04
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = -1
Query: 676 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 557
+K QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 5e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -3
Query: 473 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 360
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 62.5 bits (145), Expect = 2e-08
Identities = 35/76 (46%), Positives = 37/76 (48%)
Frame = +3
Query: 558 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCR 737
VR GETRQD K P P PPFSL + + GIS RCR
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 738 SFAPSWAVCTNPPFQP 785
SFAPSWAV NPPF P
Sbjct: 83 SFAPSWAVSKNPPFSP 98
Score = 60.1 bits (139), Expect = 1e-07
Identities = 42/89 (47%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +1
Query: 586 IKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGKRGAFS*LTL*VSQFGVG---RSLQAG 756
+KI VS LP ALSCS+PA RIPV PF G+ + S G+ RS
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPV--PPFSLAGSVA--LSHSSHSGISARCRSFAPS 87
Query: 757 LC-ARTPRFSPTAAPYPVTIVLSPTR*DT 840
++ P FSPTAAPYPVT+ LSPTR T
Sbjct: 88 WAVSKNPPFSPTAAPYPVTVHLSPTRKST 116
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 4e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 273 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 440
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 58.0 bits (134), Expect = 4e-07
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +3
Query: 372 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 545
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 546 IDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 644
I Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 53.6 bits (123), Expect = 9e-06
Identities = 26/40 (65%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = -2
Query: 852 VAISRVLPGWTQDDSYRIRRSGRAETGGSCTQPS-LERTT 736
+A+ R LPGWTQDDSYRIRRSGRAE G P+ ER T
Sbjct: 1 MALRRALPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPT 40
Score = 43.6 bits (98), Expect = 0.010
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = -3
Query: 779 KRGVRAHSPAWSERPTPN 726
+RGVRAHSPAWSERPTPN
Sbjct: 25 ERGVRAHSPAWSERPTPN 42
>UniRef50_Q51612 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Plasmid
ColE1
Length = 96
Score = 51.6 bits (118), Expect = 4e-05
Identities = 28/63 (44%), Positives = 28/63 (44%)
Frame = -3
Query: 1088 FFXGXIXXXXXKKXPXXXXXFFXXXXXXNFFXEXXWFXQXXDTKYCXXSVAVVRPPLQEL 909
FF KK F N F E W Q DTKYC SVAVV P LQEL
Sbjct: 4 FFSARNLLLANKKTTATNGGLFAGSRATNSFSEGNWLQQSADTKYCPSSVAVVGPLLQEL 63
Query: 908 CST 900
CST
Sbjct: 64 CST 66
>UniRef50_A4LA78 Cluster: Putative uncharacterized protein; n=1;
Edwardsiella tarda|Rep: Putative uncharacterized protein
- Edwardsiella tarda
Length = 99
Score = 46.0 bits (104), Expect = 0.002
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +1
Query: 748 QAGLCARTPRFSPTAAPYPVTIVLSPTR*DTTYRHWQ 858
QAG C +P FSPT P VT++L+PT DT RHW+
Sbjct: 64 QAGFCTNSP-FSPTITPVQVTVLLNPTLTDTQKRHWR 99
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.006
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 392 HSKAVIRLSTESGDNAGKNM 451
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 42.3 bits (95), Expect = 0.022
Identities = 22/40 (55%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -2
Query: 852 VAISRVLPGWTQDDSYRIRRSGRAETGGSCTQPS-LERTT 736
+A R PGWTQ +SYRIRRS RAE G P+ ER T
Sbjct: 1 MAFYRAFPGWTQVNSYRIRRSSRAERGVLAYSPAWSERPT 40
Score = 39.1 bits (87), Expect = 0.21
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = -3
Query: 779 KRGVRAHSPAWSERPTPN*DT 717
+RGV A+SPAWSERPTP+ DT
Sbjct: 25 ERGVLAYSPAWSERPTPSRDT 45
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.068
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 271 SALMNRPTRGERRFAYW 321
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.12
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 343 ERGSGRAPNTQTASPRALADSLMQ 272
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 35.1 bits (77), Expect = 3.4
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +1
Query: 79 PDMXXXIDEFGQTTTRMQ 132
PDM IDEFGQTTTRMQ
Sbjct: 347 PDMIRYIDEFGQTTTRMQ 364
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 34.7 bits (76), Expect = 4.5
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -1
Query: 703 MRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKR 599
+R+R A RR GG+ G+R+GRNR+ + RG+R
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQ--QRGQR 387
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 7.8
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 482 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 360
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 7.8
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 154 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 321
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 924,433,384
Number of Sequences: 1657284
Number of extensions: 19571856
Number of successful extensions: 56151
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 52867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56106
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 111813361825
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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