Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_F21
         (1193 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            28   0.47 
AY659931-1|AAT51799.1|  167|Anopheles gambiae lysozyme i-1 protein.    24   7.6  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   7.6  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 28.3 bits (60), Expect = 0.47
 Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = +3

Query: 270  LLKSEDLKKNVQSAKKLQKLRYLIQILKKICPCGCV-YVVARNSVAEHAI 416
            ++   D  K+++   K + L+++ QI +K+     + Y V+RN V +HAI
Sbjct: 2888 VINKMDKIKDMKMVLKEKNLKFITQIKEKVGKMKQIGYHVSRNDVTQHAI 2937


>AY659931-1|AAT51799.1|  167|Anopheles gambiae lysozyme i-1 protein.
          Length = 167

 Score = 24.2 bits (50), Expect = 7.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 500 YNCNNEVTASTAKKLHECIE 559
           YNC N V      K+ ECI+
Sbjct: 137 YNCKNAVPIVYQSKIDECIQ 156


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 24.2 bits (50), Expect = 7.6
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 407  TRNKHALNHFNTPHSDCHGLAANSTTWEIYCYNCN 511
            ++N+H L  + T +   HGL+A     + Y  NCN
Sbjct: 908  SQNRHEL--YRTVYKADHGLSALHLAQQDYQLNCN 940


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 870,287
Number of Sequences: 2352
Number of extensions: 16047
Number of successful extensions: 48
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 135295257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)