Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_F21
         (1193 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   4.0  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   5.3  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    23   5.3  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    23   5.3  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    23   5.3  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    23   5.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   5.3  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    23   5.3  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    23   5.3  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    22   9.3  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 401 HRVACHNVNTSTRTNLLQNL 342
           HR ACH+ ++ T++ L++ L
Sbjct: 132 HRAACHSGSSLTKSRLMRCL 151


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 305 ECKKVAKTEVLDPDFEEDLSLWMCLRCGT 391
           E  KV    +LD D+  +  +WM L C +
Sbjct: 393 EGMKVFDELLLDADWSVNAGMWMWLSCSS 421


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 494 YCYNCNNEVTASTAKKLHECIEYLKK 571
           Y YN NN    +  KKL+  I Y+++
Sbjct: 96  YKYNYNNNNYNNNCKKLYYNINYIEQ 121


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 494 YCYNCNNEVTASTAKKLHECIEYLKK 571
           Y YN NN    +  KKL+  I Y+++
Sbjct: 96  YKYNYNNNNYNNNCKKLYYNINYIEQ 121


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 494 YCYNCNNEVTASTAKKLHECIEYLKK 571
           Y YN NN    +  KKL+  I Y+++
Sbjct: 96  YKYNYNNNNYNNNCKKLYYNINYIEQ 121


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 494 YCYNCNNEVTASTAKKLHECIEYLKK 571
           Y YN NN    +  KKL+  I Y+++
Sbjct: 96  YKYNYNNNNYNNNCKKLYYNINYIEQ 121


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 223 CGFYVLFARLC*FVSIFSRVALSL 152
           C FY+     C   SIF+ VA+S+
Sbjct: 259 CDFYIAMDVTCSTSSIFNLVAISI 282


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +3

Query: 483 PGKSTVTTVIMK 518
           PGKST+TTV +K
Sbjct: 129 PGKSTITTVEVK 140


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +3

Query: 483 PGKSTVTTVIMK 518
           PGKST+TTV +K
Sbjct: 140 PGKSTITTVEVK 151


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -1

Query: 383 NVNTSTRTNLLQNLDQVPQFLQLFCTLNILFQILR 279
           N+N ++  NLL      P +L   C L  L   LR
Sbjct: 142 NINDASGLNLLPMNRNRPAYLASKCALTTLTDCLR 176


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,050
Number of Sequences: 438
Number of extensions: 4279
Number of successful extensions: 36
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 40729338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)