Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_F20
         (1228 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.          33   2.8  
EF212156-1|ABN05232.1|  234|Homo sapiens cellular titin isoform ...    33   2.8  
EF212155-1|ABN05231.1|  391|Homo sapiens cellular titin isoform ...    33   2.8  
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                33   2.8  

>X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.
          Length = 7962

 Score = 32.7 bits (71), Expect = 2.8
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
 Frame = +2

Query: 491  PXKXPD--KRPKTXER-PRXQXXXX*APPPXRSSQKXTLNPXVAKPDXL*KYXASPPXKL 661
            P K P+  K+P   ++ P        APP         L P   KP  + K   +PP K+
Sbjct: 6694 PAKVPEVPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKPTPVPKKVEAPPPKV 6753

Query: 662  PRRXQPVP 685
            P++ +PVP
Sbjct: 6754 PKKREPVP 6761


>EF212156-1|ABN05232.1|  234|Homo sapiens cellular titin isoform
           PEVK variant 4 protein.
          Length = 234

 Score = 32.7 bits (71), Expect = 2.8
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
 Frame = +2

Query: 491 PXKXPD--KRPKTXER-PRXQXXXX*APPPXRSSQKXTLNPXVAKPDXL*KYXASPPXKL 661
           P K P+  K+P   ++ P        APP         L P   KP  + K   +PP K+
Sbjct: 70  PAKVPEVPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKPTPVPKKVEAPPPKV 129

Query: 662 PRRXQPVP 685
           P++ +PVP
Sbjct: 130 PKKREPVP 137


>EF212155-1|ABN05231.1|  391|Homo sapiens cellular titin isoform
           PEVK variant 3 protein.
          Length = 391

 Score = 32.7 bits (71), Expect = 2.8
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
 Frame = +2

Query: 491 PXKXPD--KRPKTXER-PRXQXXXX*APPPXRSSQKXTLNPXVAKPDXL*KYXASPPXKL 661
           P K P+  K+P   ++ P        APP         L P   KP  + K   +PP K+
Sbjct: 70  PAKVPEVPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKPTPVPKKVEAPPPKV 129

Query: 662 PRRXQPVP 685
           P++ +PVP
Sbjct: 130 PKKREPVP 137


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 32.7 bits (71), Expect = 2.8
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
 Frame = +2

Query: 491   PXKXPD--KRPKTXER-PRXQXXXX*APPPXRSSQKXTLNPXVAKPDXL*KYXASPPXKL 661
             P K P+  K+P   ++ P        APP         L P   KP  + K   +PP K+
Sbjct: 10956 PAKVPEVPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKPTPVPKKVEAPPPKV 11015

Query: 662   PRRXQPVP 685
             P++ +PVP
Sbjct: 11016 PKKREPVP 11023


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,760,506
Number of Sequences: 237096
Number of extensions: 1423646
Number of successful extensions: 2923
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2734
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17394608680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)