Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_F20
         (1228 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    32   1.4  
AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    29   9.8  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    29   9.8  

>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
           protein.
          Length = 926

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 20/78 (25%), Positives = 28/78 (35%)
 Frame = +2

Query: 464 IRGXRKXXHPXKXPDKRPKTXERPRXQXXXX*APPPXRSSQKXTLNPXVAKPDXL*KYXA 643
           +R  R    P + P K P T   P         PPP R   +    P    P    +   
Sbjct: 525 VRTTRPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPTRPPTRPPTPPPTRPPPPPTRAST 584

Query: 644 SPPXKLPRRXQPVPTLTL 697
             P  LP   +P+P +T+
Sbjct: 585 PAPTYLPPTNKPLPPVTV 602


>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p protein.
          Length = 420

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 13/40 (32%), Positives = 14/40 (35%)
 Frame = +2

Query: 1040 PXPPPXXKXGXXPWXXPPKXTXXXXPXXPGXXXPPXXPPK 1159
            P PPP  K    P   PP       P  P    P   PP+
Sbjct: 225  PPPPPPPKPQPTPGYGPPTPPPGPGPAQPAPQPPRPQPPR 264


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
            protein.
          Length = 420

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 13/40 (32%), Positives = 14/40 (35%)
 Frame = +2

Query: 1040 PXPPPXXKXGXXPWXXPPKXTXXXXPXXPGXXXPPXXPPK 1159
            P PPP  K    P   PP       P  P    P   PP+
Sbjct: 225  PPPPPPPKPQPTPGYGPPTPPPGPGPAQPAPQPPRPQPPR 264


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,452,053
Number of Sequences: 53049
Number of extensions: 405021
Number of successful extensions: 910
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6539766705
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)