Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_F19
         (1207 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     29   0.053
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    24   2.0  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    24   2.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    24   2.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   2.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   2.6  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   6.0  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 29.5 bits (63), Expect = 0.053
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 177 RMQHPASSALPRYGXHTLSHWARAALTPRLRFL 275
           +M HP     P YG H +++     LTP+L ++
Sbjct: 436 KMNHPVYHKDPHYGFHNVTNTTLQNLTPQLNYI 468


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
            candidate 62 protein.
          Length = 320

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 1035 NRLVQLLXEXIAIYESXFPDLKEDRGXNNWCKLTNQL 925
            N LVQ++ + I +  +    L      N WCKL   L
Sbjct: 57   NLLVQIILDVILLILNVHTILTTITKRNQWCKLLENL 93


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
            candidate 37 protein.
          Length = 331

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 1035 NRLVQLLXEXIAIYESXFPDLKEDRGXNNWCKLTNQL 925
            N LVQ++ + I +  +    L      N WCKL   L
Sbjct: 57   NLLVQIILDVILLILNVHTILTTITKRNQWCKLLENL 93


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
            candidate 32 protein.
          Length = 651

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 1035 NRLVQLLXEXIAIYESXFPDLKEDRGXNNWCKLTNQL 925
            N LVQ++ + I +  +    L      N WCKL   L
Sbjct: 377  NLLVQIILDVILLILNVHTILTTITKRNQWCKLLENL 413


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 723 FMFYPCQESQDNTLSNNL*VMGPSSTY 803
           ++  P  +S DN + NNL    P STY
Sbjct: 398 YLALPKTDSSDNRILNNLLDKKPYSTY 424


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 723 FMFYPCQESQDNTLSNNL*VMGPSSTY 803
           ++  P  +S DN + NNL    P STY
Sbjct: 290 YLALPKTDSSDNRILNNLLDKKPYSTY 316


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 489 YLYYHSVKLFILENKTRNFNIVIFNQI 569
           Y Y+  V + I   K RN N+++  Q+
Sbjct: 158 YTYFLCVIVCIFRGKYRNINLLLTEQL 184


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 258,318
Number of Sequences: 336
Number of extensions: 5951
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35144262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)