Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_F19
         (1207 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0055 + 10299539-10299703,10300042-10300746,10301025-103011...    29   9.7  
01_01_0592 + 4414416-4415132                                           29   9.7  

>04_03_0055 +
           10299539-10299703,10300042-10300746,10301025-10301116,
           10302896-10303313
          Length = 459

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 26/101 (25%), Positives = 42/101 (41%)
 Frame = -1

Query: 355 ISKNYPKLNQSIQLSTWACLPYX*CIYKNRRRGVRAARAQCDRVWXPXRGRADEAGCCMR 176
           IS N P L Q I+   W  L +  C++      V+  R    RVW    G + +    +R
Sbjct: 147 ISWNSPLLKQPIEYHWW--LGFKPCLH------VQIPR----RVWYMAFGSSKDQVVFVR 194

Query: 175 PTSRNXRAGHELTVLQHPKAEGLRGPQRRRXXKNXTRXGER 53
           P  R      +  V++ P+A+ L G        + +  GE+
Sbjct: 195 PAKRRRVDAEQTEVVKRPRAKLLHGTDNLTMSPSCSAQGEK 235


>01_01_0592 + 4414416-4415132
          Length = 238

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 20/64 (31%), Positives = 25/64 (39%)
 Frame = -2

Query: 243 APSVTECGXHXEGEQMRLDAACDQPAETXELGMS*PCXSTQRRKGCAARSAGEXARTXPX 64
           A  VTE     EGE+   DA  D+ AE  E          +      A  AGE  +    
Sbjct: 7   ADEVTEAMEQVEGEREEADAVADEAAEVMEQAEG----EREEAIDAVAGEAGEVMKEVVE 62

Query: 63  GEKE 52
           GE+E
Sbjct: 63  GERE 66


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,750,966
Number of Sequences: 37544
Number of extensions: 566398
Number of successful extensions: 1072
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3689769684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)