Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_F17
         (1271 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119164-1|AAM51024.1|  192|Drosophila melanogaster RH23514p pro...    32   1.9  
AE014134-1996|AAF53039.1|  192|Drosophila melanogaster CG16743-P...    32   1.9  
AM412919-1|CAL85542.1|  181|Drosophila melanogaster CG16743 prot...    31   2.5  
AM412917-1|CAL85540.1|  181|Drosophila melanogaster CG16743 prot...    31   2.5  

>AY119164-1|AAM51024.1|  192|Drosophila melanogaster RH23514p protein.
          Length = 192

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +3

Query: 906  PXPXRXXXPXXKPQPXGXXPGXXPPXXQPGEXPXXNP 1016
            P P +   P   P      PG  PP   PG+ P  NP
Sbjct: 104  PHPQQAPPPSMYPPDPSGYPGGYPPQGAPGQNPVNNP 140


>AE014134-1996|AAF53039.1|  192|Drosophila melanogaster CG16743-PA
            protein.
          Length = 192

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +3

Query: 906  PXPXRXXXPXXKPQPXGXXPGXXPPXXQPGEXPXXNP 1016
            P P +   P   P      PG  PP   PG+ P  NP
Sbjct: 104  PHPQQAPPPSMYPPDPSGYPGGYPPQGAPGQNPVNNP 140


>AM412919-1|CAL85542.1|  181|Drosophila melanogaster CG16743 protein
            protein.
          Length = 181

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +3

Query: 906  PXPXRXXXPXXKPQPXGXXPGXXPPXXQPGEXPXXNP 1016
            P P +   P   P      PG  PP   PG+ P  NP
Sbjct: 104  PHPQQAPPPSMYPPGPSGYPGGYPPQGAPGQNPVNNP 140


>AM412917-1|CAL85540.1|  181|Drosophila melanogaster CG16743 protein
            protein.
          Length = 181

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +3

Query: 906  PXPXRXXXPXXKPQPXGXXPGXXPPXXQPGEXPXXNP 1016
            P P +   P   P      PG  PP   PG+ P  NP
Sbjct: 104  PHPQQAPPPSMYPPGPSGYPGGYPPQGAPGQNPVNNP 140


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.316    0.139    0.437 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,538,608
Number of Sequences: 53049
Number of extensions: 218118
Number of successful extensions: 482
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6845363280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)