Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_F14
         (1228 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0325 + 7276650-7276770,7276979-7277055,7277146-7277188,727...    35   0.11 
04_01_0476 + 6215401-6217445,6217538-6217630,6218031-6218133,621...    30   3.2  

>09_02_0325 +
           7276650-7276770,7276979-7277055,7277146-7277188,
           7277276-7277333,7277922-7277991,7278202-7278670,
           7278895-7278959
          Length = 300

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 23/84 (27%), Positives = 40/84 (47%)
 Frame = +2

Query: 485 IIEVRAPVAGPQLQRPPFETPLVLLETHIAESLKQSQPNTEQKTPVSEDGNVAIGTSCKN 664
           IIE +  + G + + P     + L      +S +++ P+T    P SE     + ++  N
Sbjct: 142 IIEEQQRLGGVKSETPAAGASVTLPSDQFPDS-ERTDPSTP--APTSESPTQGVPSNRDN 198

Query: 665 GGCNTAFEGPQTNESLCTYHPGCP 736
           GG N A + PQ ++SL  + P  P
Sbjct: 199 GGQNEATKSPQRDDSLSRHEPLTP 222


>04_01_0476 +
           6215401-6217445,6217538-6217630,6218031-6218133,
           6218237-6218254
          Length = 752

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 16/63 (25%), Positives = 31/63 (49%)
 Frame = -2

Query: 198 IFYERRKNYPFCKYSNTG*YTVHTI*SVLN*KINVYHVCTYVQISSVFNCRDKXRNLKDS 19
           IFY++ K++ F  + +        +  ++   +   H+CT  ++SS+ +     R LKD 
Sbjct: 260 IFYDKEKHFDFMAWLHVS--NKFDVERLIKELVQSVHLCTAAELSSISSLDQAQRILKDK 317

Query: 18  L*G 10
           L G
Sbjct: 318 LKG 320


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,640,633
Number of Sequences: 37544
Number of extensions: 584970
Number of successful extensions: 1189
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3771247248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)