Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_F12
         (1217 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0416 + 13684604-13688050                                         29   9.8  
02_03_0205 - 16411707-16412759,16413077-16413256,16413960-164144...    29   9.8  

>05_03_0416 + 13684604-13688050
          Length = 1148

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 45  CLQHGSCKQLVHSPDGLHQLNKMATLN 125
           CL  G C +L+  P G+  L ++A LN
Sbjct: 642 CLDLGYCHELMEFPKGIANLRRLAVLN 668


>02_03_0205 -
           16411707-16412759,16413077-16413256,16413960-16414498,
           16414798-16414825
          Length = 599

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +3

Query: 9   DSYREFL*IXTVCLQHGSCKQLVHSPDGLHQLNKMATLNTI 131
           D Y E+  +    + HG     V +P+G+ QLN + TL  +
Sbjct: 458 DIYHEYCKVKFPSILHGLDMYGVEAPEGIDQLNDLHTLGVV 498


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,506,837
Number of Sequences: 37544
Number of extensions: 550803
Number of successful extensions: 8454
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5582
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3736328292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)