Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_F09
(1245 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 37 0.029
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 36 0.051
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 36 0.051
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 34 0.21
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.36
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.63
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 33 0.63
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.63
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 31 1.4
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_4337| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.5
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 30 4.4
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.4
SB_33219| Best HMM Match : RhoGAP (HMM E-Value=0.0014) 29 5.8
SB_17044| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 29 7.7
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 37.1 bits (82), Expect = 0.029
Identities = 32/119 (26%), Positives = 32/119 (26%)
Frame = +3
Query: 633 PPPPEXXQKXXPXIXGGXTPXXXXKXXXFPPEXPXGPPXXPXXPXTENXXAXPPXXRGGL 812
PPPP P G P P P GPP P P PP G
Sbjct: 31 PPPPYEAPPPPPGPPGPDGPPGFPGPQG--PNGPKGPPGLPGPPGPPGFQG-PPGNPAGA 87
Query: 813 XNTPXGGXPXPGXVXRPNXGXGXKPPXXPXXGPXXGNXXXXXPXXKXXXSPXXXPXVXG 989
P G P P V P G P P GP P P P G
Sbjct: 88 IGPP--GLPGPNGVNGPPGELGDMGPPGP-PGPPGPQMPPGPPGLPGPPGPAGPPGTNG 143
Score = 34.7 bits (76), Expect = 0.16
Identities = 44/190 (23%), Positives = 49/190 (25%), Gaps = 6/190 (3%)
Frame = +3
Query: 444 PVPPPXXPXPPXFXXGXXXXPXXRGEXGXPXXSGXTPXKXXXPXXXXXXXXXXXXXXXXF 623
P PP P PP G P G G P SG
Sbjct: 630 PASPPSPPGPPG-PPGPKGPPGPNGPLGPPGESGPAGNAGGVGYQGNHGNPAGVQGPNGQ 688
Query: 624 XXXP----PPPEXXQKXXPXIXGGXTPXXXXKXXXFPPEXPXGPPXXPXXPXTENXXAXP 791
P PP + + P + G P P P GPP P P N P
Sbjct: 689 PGPPGINGPPGQIGEMGPPGLPGPPGPASPPS-----PPGPPGPPG-PNGPPGPNGPLGP 742
Query: 792 PXXRGGLXNTPXGGXPXPGXVXRP--NXGXGXKPPXXPXXGPXXGNXXXXXPXXKXXXSP 965
P G N GG G P + G +P GP P P
Sbjct: 743 PGECGPAGNA--GGVGCQGHHGNPAGSQGPNGQPGPPGINGPPGQVGEMGPPGLPGPPGP 800
Query: 966 XXXPXVXGXP 995
P G P
Sbjct: 801 ASPPSPPGPP 810
Score = 32.7 bits (71), Expect = 0.63
Identities = 43/190 (22%), Positives = 48/190 (25%), Gaps = 6/190 (3%)
Frame = +3
Query: 444 PVPPPXXPXPPXFXXGXXXXPXXRGEXGXPXXSGXTPXKXXXPXXXXXXXXXXXXXXXXF 623
P PP P PP G P G G P G
Sbjct: 715 PASPPSPPGPPG-PPGPNGPPGPNGPLGPPGECGPAGNAGGVGCQGHHGNPAGSQGPNGQ 773
Query: 624 XXXP----PPPEXXQKXXPXIXGGXTPXXXXKXXXFPPEXPXGPPXXPXXPXTENXXAXP 791
P PP + + P + G P P P GPP P P N P
Sbjct: 774 PGPPGINGPPGQVGEMGPPGLPGPPGPASPPS-----PPGPPGPPG-PKGPPGPNGPLGP 827
Query: 792 PXXRGGLXNTPXGGXPXPGXVXRP--NXGXGXKPPXXPXXGPXXGNXXXXXPXXKXXXSP 965
P G N GG G P + G +P GP P P
Sbjct: 828 PGECGPAGNA--GGVGCQGNHGNPAGSQGPNGQPGPPGINGPPGQVGEMGPPGLPGPPGP 885
Query: 966 XXXPXVXGXP 995
P G P
Sbjct: 886 ASPPSPPGPP 895
Score = 31.9 bits (69), Expect = 1.1
Identities = 48/195 (24%), Positives = 52/195 (26%), Gaps = 11/195 (5%)
Frame = +3
Query: 444 PVPPPXXPXPPXFXXGXXXXP------XXRGEXGXPXXSGXT-PXKXXXPXXXXXXXXXX 602
P PP P PP G P G G P G P P
Sbjct: 31 PPPPYEAPPPPPGPPGPDGPPGFPGPQGPNGPKGPPGLPGPPGPPGFQGPPGNPAGAIGP 90
Query: 603 XXXXXXFXXXPPPPEXXQKXXPXIXGGXTPXXXXKXXXFPPEXPXGPPXXPXXPXTENXX 782
PP E P G P + PP P GPP P P N
Sbjct: 91 PGLPGPNGVNGPPGELGDMGPPGPPGPPGP----QMPPGPPGLP-GPP-GPAGPPGTNGE 144
Query: 783 AXPPXXRG--GLXNTP--XGGXPXPGXVXRPNXGXGXKPPXXPXXGPXXGNXXXXXPXXK 950
PP G G P G P + PN G P P GP P +
Sbjct: 145 LGPPGDVGPPGNPGGPGLQGNHGNPAGIQGPNGLPGPNGPLGP-PGPPGDMGPPGLPGPQ 203
Query: 951 XXXSPXXXPXVXGXP 995
P P + G P
Sbjct: 204 GPQMPPGPPGLPGAP 218
Score = 29.9 bits (64), Expect = 4.4
Identities = 27/103 (26%), Positives = 29/103 (28%)
Frame = +2
Query: 638 PP*KXSKXSXPNXXGXNPXGXXKXPGXPPGXPPXAPPXPXPAVNGKXXRFXPXGKGGAXX 817
PP P G P G PG PPG P P P +NG P G+ G
Sbjct: 442 PPGPLGDVGPPGLPG--PPGPQMPPG-PPGLPGAPGPNGPPGINGP---LGPPGEAGPPG 495
Query: 818 YPTRGVXXSGVGXPPKXGXWXKTPXXXRXGAXXGXXXXXXPPG 946
P G P P G PPG
Sbjct: 496 NPGGPGYQGNHGNPAGPQGPNGQPGPPGINGPPGPLGDVGPPG 538
Score = 29.5 bits (63), Expect = 5.8
Identities = 22/87 (25%), Positives = 24/87 (27%)
Frame = +2
Query: 689 PXGXXKXPGXPPGXPPXAPPXPXPAVNGKXXRFXPXGKGGAXXYPTRGVXXSGVGXPPKX 868
P G PG P P PP P P + G P G G P G P
Sbjct: 530 PLGDVGPPGLPGPPGPQMPPGP-PGLPGAPGPNGPPGINGPLGPPGEAGPPGNPGGPGYQ 588
Query: 869 GXWXKTPXXXRXGAXXGXXXXXXPPGK 949
G G PPG+
Sbjct: 589 GNHGNPAGPQGPNGQPGPPGVNGPPGE 615
Score = 29.1 bits (62), Expect = 7.7
Identities = 20/62 (32%), Positives = 22/62 (35%)
Frame = +2
Query: 638 PP*KXSKXSXPNXXGXNPXGXXKXPGXPPGXPPXAPPXPXPAVNGKXXRFXPXGKGGAXX 817
PP P G P G PG PPG P P P +NG P G+ G
Sbjct: 527 PPGPLGDVGPPGLPG--PPGPQMPPG-PPGLPGAPGPNGPPGINGP---LGPPGEAGPPG 580
Query: 818 YP 823
P
Sbjct: 581 NP 582
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 36.3 bits (80), Expect = 0.051
Identities = 43/159 (27%), Positives = 44/159 (27%), Gaps = 7/159 (4%)
Frame = +3
Query: 444 PVPPPXXPXPPXFXXGXXXXPXXRGEXGXPXXSGXTPXKXXXPXXXXXXXXXXXXXXXXF 623
P PPP PP G P GE P + P K
Sbjct: 241 PAPPPGENRPPPPMRG----PTSGGEP-PPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTT 295
Query: 624 XXXPPPPEXXQKXXPXIXGGXTPXXXXKXXX---FPPEXPXG---PPXXPXX-PXTENXX 782
P PP Q P TP PP G PP P P T
Sbjct: 296 QGPPLPPSRDQAPAPPPPLNATPPPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRS 355
Query: 783 AXPPXXRGGLXNTPXGGXPXPGXVXRPNXGXGXKPPXXP 899
A PP G P GG P P RP G PP P
Sbjct: 356 APPPPP--GRAPQPLGGPPPPPPGRRPPSGKINPPPPPP 392
Score = 32.7 bits (71), Expect = 0.63
Identities = 40/168 (23%), Positives = 43/168 (25%), Gaps = 4/168 (2%)
Frame = +3
Query: 450 PPPXXPXPPXFXXGXXXXPXXRGEXGXPXXSGXTPX----KXXXPXXXXXXXXXXXXXXX 617
PPP PP G +G P G P K
Sbjct: 141 PPPFGAPPPPDRGGQLAKKPSQGSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHS 200
Query: 618 XFXXXPPPPEXXQKXXPXIXGGXTPXXXXKXXXFPPEXPXGPPXXPXXPXTENXXAXPPX 797
PPPPE P G + PP P P P EN PP
Sbjct: 201 RHGSAPPPPERSSGPPPPPPG----RGPSQRSLAPPPTGSSRPL-PAPPPGENRP--PPP 253
Query: 798 XRGGLXNTPXGGXPXPGXVXRPNXGXGXKPPXXPXXGPXXGNXXXXXP 941
RG T G P P P PP P GP + P
Sbjct: 254 MRGP---TSGGEPPPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGP 298
Score = 29.9 bits (64), Expect = 4.4
Identities = 22/83 (26%), Positives = 27/83 (32%), Gaps = 2/83 (2%)
Frame = +3
Query: 720 PPEXPXGPPXXPX-XPXTENXXAXPPXXRG-GLXNTPXGGXPXPGXVXRPNXGXGXKPPX 893
PPE GPP P ++ A PP L P G P + P G PP
Sbjct: 208 PPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPPPPK 267
Query: 894 XPXXGPXXGNXXXXXPXXKXXXS 962
P G+ P + S
Sbjct: 268 NAPPPPKRGSSNPPPPPTRGPPS 290
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 36.3 bits (80), Expect = 0.051
Identities = 43/159 (27%), Positives = 44/159 (27%), Gaps = 7/159 (4%)
Frame = +3
Query: 444 PVPPPXXPXPPXFXXGXXXXPXXRGEXGXPXXSGXTPXKXXXPXXXXXXXXXXXXXXXXF 623
P PPP PP G P GE P + P K
Sbjct: 153 PAPPPGENRPPPPMRG----PTSGGEP-PPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTT 207
Query: 624 XXXPPPPEXXQKXXPXIXGGXTPXXXXKXXX---FPPEXPXG---PPXXP-XXPXTENXX 782
P PP Q P TP PP G PP P P T
Sbjct: 208 QGPPLPPSRDQAPAPPPPLNATPPPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRS 267
Query: 783 AXPPXXRGGLXNTPXGGXPXPGXVXRPNXGXGXKPPXXP 899
A PP G P GG P P RP G PP P
Sbjct: 268 APPPPP--GRAPQPLGGPPPPPPGRRPPSGKINPPPPPP 304
Score = 32.7 bits (71), Expect = 0.63
Identities = 40/168 (23%), Positives = 43/168 (25%), Gaps = 4/168 (2%)
Frame = +3
Query: 450 PPPXXPXPPXFXXGXXXXPXXRGEXGXPXXSGXTPX----KXXXPXXXXXXXXXXXXXXX 617
PPP PP G +G P G P K
Sbjct: 53 PPPFGAPPPPDRGGQLAKKPSQGSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHS 112
Query: 618 XFXXXPPPPEXXQKXXPXIXGGXTPXXXXKXXXFPPEXPXGPPXXPXXPXTENXXAXPPX 797
PPPPE P G + PP P P P EN PP
Sbjct: 113 RHGSAPPPPERSSGPPPPPPG----RGPSQRSLAPPPTGSSRPL-PAPPPGENRP--PPP 165
Query: 798 XRGGLXNTPXGGXPXPGXVXRPNXGXGXKPPXXPXXGPXXGNXXXXXP 941
RG T G P P P PP P GP + P
Sbjct: 166 MRGP---TSGGEPPPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGP 210
Score = 29.9 bits (64), Expect = 4.4
Identities = 22/83 (26%), Positives = 27/83 (32%), Gaps = 2/83 (2%)
Frame = +3
Query: 720 PPEXPXGPPXXPX-XPXTENXXAXPPXXRG-GLXNTPXGGXPXPGXVXRPNXGXGXKPPX 893
PPE GPP P ++ A PP L P G P + P G PP
Sbjct: 120 PPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPPPPK 179
Query: 894 XPXXGPXXGNXXXXXPXXKXXXS 962
P G+ P + S
Sbjct: 180 NAPPPPKRGSSNPPPPPTRGPPS 202
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 34.3 bits (75), Expect = 0.21
Identities = 31/127 (24%), Positives = 38/127 (29%), Gaps = 8/127 (6%)
Frame = +3
Query: 633 PPPPEXXQKXXPXIXGGXTPXXXXKXXXFPPEXPXGPPXXPXXPXTENXXAXPPXXRG-- 806
PPPP P G P + PP P P + + PP RG
Sbjct: 287 PPPPPSRGAAPPPPSRGAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAP 346
Query: 807 -----GLXNTPXGGXPXPGXVXRPNXGXGXKPPXXPXXGP-XXGNXXXXXPXXKXXXSPX 968
G+ P GG P P G PP P GN P + +P
Sbjct: 347 PPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGRPPSSLGNPPPPPPPGR--GAPP 404
Query: 969 XXPXVXG 989
P + G
Sbjct: 405 PGPMIPG 411
Score = 31.9 bits (69), Expect = 1.1
Identities = 21/79 (26%), Positives = 25/79 (31%)
Frame = +2
Query: 635 PPP*KXSKXSXPNXXGXNPXGXXKXPGXPPGXPPXAPPXPXPAVNGKXXRFXPXGKGGAX 814
PPP P+ P P PP P PP P P + G+ G
Sbjct: 338 PPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGRPP--SSLGNPPPP 395
Query: 815 XYPTRGVXXSGVGXPPKXG 871
P RG G P + G
Sbjct: 396 PPPGRGAPPPGPMIPGRAG 414
Score = 30.7 bits (66), Expect = 2.5
Identities = 36/141 (25%), Positives = 39/141 (27%), Gaps = 2/141 (1%)
Frame = +3
Query: 432 LGXXPVPPPX-XPXPPXFXXGXXXXPXXRGEXGXPXXSGXTPXKXXXPXXXXXXXXXXXX 608
LG P PPP PP G P RG P P +
Sbjct: 283 LGIQPPPPPSRGAAPPPPSRGAPPPPPSRGSAPPP-----PPARMGTAPPPPPPSRSSQR 337
Query: 609 XXXXFXXXPPPPEXXQKXXPXIXGGXTPXXXXKXXXFPPEXPXGPPXXPXXPXT-ENXXA 785
PPPP P + G P PP P PP P + N
Sbjct: 338 PPPPSRGAPPPPSMGM-APPPVGGAAPPPPPPPPVGGPPPPP--PPIEGRPPSSLGNPPP 394
Query: 786 XPPXXRGGLXNTPXGGXPXPG 848
PP RG P G PG
Sbjct: 395 PPPPGRG----APPPGPMIPG 411
Score = 30.3 bits (65), Expect = 3.3
Identities = 32/126 (25%), Positives = 32/126 (25%), Gaps = 5/126 (3%)
Frame = +3
Query: 633 PPPPEXXQKXXPXIXGGXTPXXXXKXXXFPPEXPXGPPXXPXXPXTENXXAXPPXXRGGL 812
PPPP P G P PP PP P T PP
Sbjct: 288 PPPPSRGAAPPPPSRGAPPP---------PPSRGSAPPPPPARMGTA-PPPPPPSRSSQR 337
Query: 813 XNTPXGGXPXP---GXVXRPNXGXGXKPPXXPXXG--PXXGNXXXXXPXXKXXXSPXXXP 977
P G P P G P G PP P G P P P P
Sbjct: 338 PPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGRPPSSLGNPPPPPP 397
Query: 978 XVXGXP 995
G P
Sbjct: 398 PGRGAP 403
>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 33.5 bits (73), Expect = 0.36
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +2
Query: 635 PPP*KXSKXSXPNXXGXNPXGXXKXPGXPPGXPPXAPPXPXPAVNG 772
PPP + P G +P P P G P PP P P + G
Sbjct: 281 PPPPPLTGGMLPPPFGGHPAAAPPPPPLPAGVPAPPPPPPPPMLGG 326
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 32.7 bits (71), Expect = 0.63
Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Frame = -2
Query: 941 GGXXXXIXRXXPPXGXXRGFXPTPXVWAXDXPRXXXPPXWGIXKP----PPXPRG 789
GG PP G RG P P + PR PP +G P PP PRG
Sbjct: 449 GGPPQLPPNLPPPPGGMRGMPPPP-MGMYPPPRGFPPPPFGPPPPFYRGPPPPRG 502
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 32.7 bits (71), Expect = 0.63
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +2
Query: 635 PPP*KXSKXSXPNXXGXNPXGXXKXPGXPPGXPPXAPPXPXP 760
PPP S P +P + P PP PP PP P P
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPP 412
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 635 PPP*KXSKXSXPNXXGXNPXGXXKXPGXPPGXPPXAPPXPXP 760
PPP S P P P PP PP PP P P
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPP 409
Score = 31.1 bits (67), Expect = 1.9
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 635 PPP*KXSKXSXPNXXGXNPXGXXKXPGXPPGXPPXAPPXPXP 760
PPP P P P PP PP APP P P
Sbjct: 384 PPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPP 425
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 635 PPP*KXSKXSXPNXXGXNPXGXXKXPGXPPGXPPXAPPXPXP 760
PPP S P P P PP PP PP P P
Sbjct: 379 PPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAP 420
Score = 29.9 bits (64), Expect = 4.4
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +2
Query: 635 PPP*KXSKXSXPNXXGXNPXGXXKXPGXPPGXPPXAPPXPXP 760
PPP P P P PP PP PP P P
Sbjct: 373 PPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPP 414
Score = 29.9 bits (64), Expect = 4.4
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +2
Query: 632 APPP*KXSKXSXPNXXGXNPXGXXKXPGXPPGXPPXAPPXPXP 760
+PPP P P P PP PP PP P P
Sbjct: 388 SPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
Score = 29.5 bits (63), Expect = 5.8
Identities = 20/82 (24%), Positives = 22/82 (26%)
Frame = +3
Query: 720 PPEXPXGPPXXPXXPXTENXXAXPPXXRGGLXNTPXGGXPXPGXVXRPNXGXGXKPPXXP 899
PP P PP P P + PP + P P P P PP P
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
Query: 900 XXGPXXGNXXXXXPXXKXXXSP 965
P P SP
Sbjct: 427 PPPPPPALRLACAPPRLRFTSP 448
Score = 29.1 bits (62), Expect = 7.7
Identities = 15/54 (27%), Positives = 17/54 (31%)
Frame = +3
Query: 633 PPPPEXXQKXXPXIXGGXTPXXXXKXXXFPPEXPXGPPXXPXXPXTENXXAXPP 794
PPPP P +P + PP P PP P P PP
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPP 423
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +2
Query: 635 PPP*KXSKXSXPNXXGXNPXGXXKXPGXPPGXPPXAPPXPXP 760
PPP P P P PP PP PP P P
Sbjct: 385 PPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 32.7 bits (71), Expect = 0.63
Identities = 20/69 (28%), Positives = 21/69 (30%), Gaps = 5/69 (7%)
Frame = +3
Query: 720 PPEXPXGPPXXPXXPXTENXXAXPPXXRGGLXNTPXGGXPXP-----GXVXRPNXGXGXK 884
PP P P P P PP + P G P P G P G
Sbjct: 346 PPPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPP 405
Query: 885 PPXXPXXGP 911
PP P GP
Sbjct: 406 PPPPPTNGP 414
Score = 31.9 bits (69), Expect = 1.1
Identities = 25/83 (30%), Positives = 25/83 (30%), Gaps = 3/83 (3%)
Frame = +3
Query: 633 PPPPEXXQKXXPXIXGGXTPXXXXKXXXFPPEXP--XGPPXXPXXPXTENXXAXPPXXRG 806
PPPP P TP PP P GPP P P T PP G
Sbjct: 346 PPPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPP--PPPPPTNGPPPPPPPTNG 403
Query: 807 -GLXNTPXGGXPXPGXVXRPNXG 872
P G P G R G
Sbjct: 404 PPPPPPPTNGPPSEGKCGRKPAG 426
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = +2
Query: 710 PGXPPGXPPXAPPXPXPAVNGKXXRFXPXGKGGAXXY--PTRGVXXSGVGXPP 862
P PP P A P P P + G P G GG P +GV GV P
Sbjct: 677 PPPPPPLPGGAAPPPPPPIGGGAPPPPPPGFGGFANLVKPRKGVIKPGVEMRP 729
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 31.5 bits (68), Expect = 1.4
Identities = 33/151 (21%), Positives = 36/151 (23%), Gaps = 2/151 (1%)
Frame = +3
Query: 444 PVPPPXXPXPPXFXXGXXXXPXXRGEXGXPXXSGXTPXKXXXPXXXXXXXXXXXXXXXXF 623
P PPP P PP P P + P P
Sbjct: 107 PYPPP--PNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPP- 163
Query: 624 XXXPPPPEXXQKXXPXIXGGXTPXXXXKXXXFPP--EXPXGPPXXPXXPXTENXXAXPPX 797
PPPP P P +PP P PP P P N P
Sbjct: 164 PPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYP 223
Query: 798 XRGGLXNTPXGGXPXPGXVXRPNXGXGXKPP 890
N P P P G G + P
Sbjct: 224 PPPNAPNPPYPPPPNPQFAIALCLGHGPRSP 254
Score = 30.3 bits (65), Expect = 3.3
Identities = 16/57 (28%), Positives = 17/57 (29%)
Frame = -2
Query: 527 PXFPPXXGXXXXPXPEXRGPXXXXXXXXXGPQXPTPXXXGVGXXFKPXKPXPPPPXP 357
P +PP P P P P P P P P PPPP P
Sbjct: 185 PPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPPNA--PNPPYPPPPNP 239
Score = 29.5 bits (63), Expect = 5.8
Identities = 23/93 (24%), Positives = 25/93 (26%)
Frame = +3
Query: 717 FPPEXPXGPPXXPXXPXTENXXAXPPXXRGGLXNTPXGGXPXPGXVXRPNXGXGXKPPXX 896
+PP P PP P P N PP N P P P P+ PP
Sbjct: 102 YPPPPPYPPPPNPPYPPPPNAPYPPP------PNPPY--PPPPNAPYPPSPNAPYPPPPN 153
Query: 897 PXXGPXXGNXXXXXPXXKXXXSPXXXPXVXGXP 995
P P P P P P
Sbjct: 154 PPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPP 186
Score = 29.1 bits (62), Expect = 7.7
Identities = 15/57 (26%), Positives = 16/57 (28%)
Frame = -2
Query: 527 PXFPPXXGXXXXPXPEXRGPXXXXXXXXXGPQXPTPXXXGVGXXFKPXKPXPPPPXP 357
P +PP P P P P P P P P PPP P
Sbjct: 106 PPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYP 162
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +2
Query: 635 PPP*KXSKXSXPNXXGXNPXGXXKXPGXPPGXPPXAPPXPXP 760
PPP + P P P PP PP PP P P
Sbjct: 157 PPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPP 198
>SB_4337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 423
Score = 31.5 bits (68), Expect = 1.4
Identities = 26/99 (26%), Positives = 32/99 (32%), Gaps = 3/99 (3%)
Frame = +2
Query: 695 GXXKXPGXPPGXPPXAPPXPXP---AVNGKXXRFXPXGKGGAXXYPTRGVXXSGVGXPPK 865
G PG PPG PP A G+ P G+ G P + G G PP
Sbjct: 236 GYGTLPGPPPGQQGYGPPPGQQGYGAPPGQQGYGPPLGQQGYGPPPGQ----QGYGPPPG 291
Query: 866 XGXWXKTPXXXRXGAXXGXXXXXXPPGKXXXFPXGXXXG 982
+ P G+ G PPG+ P G
Sbjct: 292 QQGYGPPPGQQGYGSPPGQQGYGPPPGQQGYGPPAGQQG 330
Score = 26.2 bits (55), Expect(2) = 8.8
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = +2
Query: 635 PPP*KXSKXSXPNXXGXNPXGXXKXPGXPPGXPPXAPP 748
PPP + P G P + G PPG PP
Sbjct: 279 PPPGQQGYGPPPGQQGYGPPPGQQGYGSPPGQQGYGPP 316
Score = 25.0 bits (52), Expect(2) = 5.2
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = +2
Query: 635 PPP*KXSKXSXPNXXGXNPXGXXKXPGXPPGXPPXAPP 748
PPP + S P G P + G P G PP
Sbjct: 297 PPPGQQGYGSPPGQQGYGPPPGQQGYGPPAGQQGYGPP 334
Score = 23.0 bits (47), Expect(2) = 5.2
Identities = 15/49 (30%), Positives = 15/49 (30%), Gaps = 2/49 (4%)
Frame = +2
Query: 404 PPXGXXGLXF--GXXSRSPPXXPXAPGLXXGGXGXXPPKGGXXVXPKXG 544
PP G G G PP G G G PP G P G
Sbjct: 252 PPPGQQGYGAPPGQQGYGPPLGQQGYGPPPGQQGYGPPPGQQGYGPPPG 300
Score = 21.0 bits (42), Expect(2) = 8.8
Identities = 11/37 (29%), Positives = 11/37 (29%)
Frame = +2
Query: 434 GXXSRSPPXXPXAPGLXXGGXGXXPPKGGXXVXPKXG 544
G PP G G G PP G P G
Sbjct: 246 GQQGYGPPPGQQGYGAPPGQQGYGPPLGQQGYGPPPG 282
>SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 931
Score = 31.1 bits (67), Expect = 1.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 689 PXGXXKXPGXPPGXPPXAPPXPXP 760
P G PG PPG PP PP P
Sbjct: 214 PPGRPGGPGMPPGGPPPFPPTSDP 237
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 30.7 bits (66), Expect = 2.5
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = -2
Query: 545 PRXXGXPXFPPXXGXXXXPXPEXRGPXXXXXXXXXGPQXPTPXXXGVGXXFKPXKPXPPP 366
P P PP G P P G P P P G P P PPP
Sbjct: 936 PPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPP-----GGSAPPPPPPPPP 990
Query: 365 PXP 357
P P
Sbjct: 991 PPP 993
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 632 APPP*KXSKXSXPNXXGXNPXGXXKXPGXPPGXPPXAPPXPXP 760
APPP S P G P G P PP PP P P
Sbjct: 952 APPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPPPPPP 994
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 29.9 bits (64), Expect = 4.4
Identities = 23/83 (27%), Positives = 27/83 (32%), Gaps = 2/83 (2%)
Frame = +2
Query: 668 PNXXGXNPXGXXKXPGXPPGXPPXAPPXPXPAVNGKXXR--FXPXGKGGAXXYPTRGVXX 841
P G P P P G PP P G + P G A P G+
Sbjct: 17 PYMGGYPPAAPGGYPPAPGGYPPAPGGYPPSGGYGYPPAGGYPPPQPGYAGGPPPPGIAP 76
Query: 842 SGVGXPPKXGXWXKTPXXXRXGA 910
G+G PP G + P GA
Sbjct: 77 -GIGGPPPSGQYGAPPTSQPYGA 98
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +2
Query: 434 GXXSRSPPXXPXAPGLXXGGXGXXPPKGGXXVXPKXGXXP 553
G +P P APG G PP GG P G P
Sbjct: 21 GYPPAAPGGYPPAPGGYPPAPGGYPPSGGYGYPPAGGYPP 60
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 29.9 bits (64), Expect = 4.4
Identities = 24/86 (27%), Positives = 25/86 (29%)
Frame = +3
Query: 633 PPPPEXXQKXXPXIXGGXTPXXXXKXXXFPPEXPXGPPXXPXXPXTENXXAXPPXXRGGL 812
PPPP Q GG P + PP G P P PP G
Sbjct: 503 PPPPGAGQ------GGGPPPPGAGQGWGQPPPGA-GQGGGPPPPGAGQGGGPPPPGAGQG 555
Query: 813 XNTPXGGXPXPGXVXRPNXGXGXKPP 890
P G G P G G PP
Sbjct: 556 WGQPPPGAGQGGGPPPPGAGQGGPPP 581
>SB_33219| Best HMM Match : RhoGAP (HMM E-Value=0.0014)
Length = 399
Score = 29.5 bits (63), Expect = 5.8
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +2
Query: 635 PPP*KXSKXSXPNXXGXNPXGXXKXPGXPPGXPPXAPPXPXP 760
PPP K + + G N G K P PP P P P
Sbjct: 260 PPPKKPDVVAEKDQKGGNEAGGTKSHSPPRAKPPPLPRNPPP 301
>SB_17044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 689 PXGXXKXPGXPPGXPPXAPPXPXPAV 766
P P PPG P PP P PAV
Sbjct: 118 PTSVPSGPRAPPGGPGAPPPPPPPAV 143
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 29.1 bits (62), Expect = 7.7
Identities = 21/75 (28%), Positives = 25/75 (33%)
Frame = +3
Query: 636 PPPEXXQKXXPXIXGGXTPXXXXKXXXFPPEXPXGPPXXPXXPXTENXXAXPPXXRGGLX 815
PP K P + G P +P P GPP P PP +GG
Sbjct: 1830 PPGPQGPKGWPGVPGPPGPPGAYGWKGYPGN-PAGPPGRDGIPG-------PPGRQGGKG 1881
Query: 816 NTPXGGXPXPGXVXR 860
G P PG V +
Sbjct: 1882 PAGIPGIPGPGGVGK 1896
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,692,843
Number of Sequences: 59808
Number of extensions: 293771
Number of successful extensions: 2015
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1483
length of database: 16,821,457
effective HSP length: 84
effective length of database: 11,797,585
effective search space used: 3893203050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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