Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_F08
         (1177 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1; ...    72   3e-11
UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1; ...    44   0.010
UniRef50_Q4TBP9 Cluster: Chromosome undetermined SCAF7101, whole...    36   2.7  
UniRef50_UPI00015A479A Cluster: UPI00015A479A related cluster; n...    35   3.5  
UniRef50_Q4U8V2 Cluster: Putative uncharacterized protein; n=3; ...    34   8.2  

>UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 77

 Score = 72.1 bits (169), Expect = 3e-11
 Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
 Frame = +3

Query: 573 FIS*LADPADFVVPKSINKRPKLLYKINLKQTKGIRPTG-THQRKNKIVIFI*FRAFSYL 749
           F+  LADPADFVVP+SINKRPK LYKINLKQTKGIR TG T + K     ++  R F ++
Sbjct: 18  FMIILADPADFVVPQSINKRPKHLYKINLKQTKGIRQTGDTSKEKQNCYFYLIPRIFIFI 77



 Score = 52.0 bits (119), Expect = 3e-05
 Identities = 24/32 (75%), Positives = 24/32 (75%)
 Frame = +2

Query: 656 LKTNKRNPSDGDTSKEKQNCYFYLIPSIFIFI 751
           LK  K     GDTSKEKQNCYFYLIP IFIFI
Sbjct: 46  LKQTKGIRQTGDTSKEKQNCYFYLIPRIFIFI 77


>UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 47

 Score = 43.6 bits (98), Expect = 0.010
 Identities = 21/26 (80%), Positives = 21/26 (80%)
 Frame = -2

Query: 834 LKLENSWTDLANFVLELFVEVQRKFK 757
           LKLEN WTDLANF LEL VEVQR  K
Sbjct: 20  LKLENGWTDLANFGLELPVEVQRGLK 45


>UniRef50_Q4TBP9 Cluster: Chromosome undetermined SCAF7101, whole
           genome shotgun sequence; n=3; Tetraodontidae|Rep:
           Chromosome undetermined SCAF7101, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 719

 Score = 35.5 bits (78), Expect = 2.7
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +2

Query: 65  ARLANNEVNAVRRCPLRDPVAWRFGPHQHG--AEAGQSSSTGRGDGSISAETSSN*CT 232
           AR +  E     RCP R P     GPH HG  + +G SS++G G  S S   S + C+
Sbjct: 654 ARRSPEEPRTSIRCPQRPPQGC--GPHGHGSGSASGCSSTSGSGSSSRSGSASGSWCS 709


>UniRef50_UPI00015A479A Cluster: UPI00015A479A related cluster; n=1;
           Danio rerio|Rep: UPI00015A479A UniRef100 entry - Danio
           rerio
          Length = 574

 Score = 35.1 bits (77), Expect = 3.5
 Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
 Frame = +3

Query: 60  CAHVSLTMKLMLFAAVLCVILWLGDSVPINMERRLVNRPPQD-----EVMGQSRPKRHQI 224
           C  +S++  +   A  + V+L   + VPI  + ++V +  +D     E++G+ R  +HQ 
Sbjct: 469 CDFISVSWLVQFAARAVRVLLDYVNHVPICSKLKMVLKKHKDWAEISEILGKPRSLQHQC 528

Query: 225 NAPVKGRQSPHRRGGIEHM 281
              ++G+ SP R G  +++
Sbjct: 529 RLVIRGQMSPERLGDPDYI 547


>UniRef50_Q4U8V2 Cluster: Putative uncharacterized protein; n=3;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria annulata
          Length = 1068

 Score = 33.9 bits (74), Expect = 8.2
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 489 NYCILKKKLLYFLICTYVYIPKFNTRKRF 575
           N+ +    +LYFL CTY + PKF T   F
Sbjct: 13  NFVLCFAPILYFLTCTYCFSPKFTTNSLF 41


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 979,444,274
Number of Sequences: 1657284
Number of extensions: 20211641
Number of successful extensions: 55407
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 51495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55165
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 117505678427
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)