Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_F08
(1177 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 27 0.32
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 23 3.9
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 23 3.9
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 6.9
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 6.9
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 6.9
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 6.9
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 6.9
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 6.9
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 6.9
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 6.9
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 6.9
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 6.9
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 6.9
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 9.1
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 9.1
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 9.1
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 9.1
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 9.1
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 9.1
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 9.1
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 22 9.1
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 27.1 bits (57), Expect = 0.32
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 722 YLIPSIFIFIYLLNFLWTSTNNSRTKLAKSVQL 820
Y+IP++ + + L LW + ++ +A SV L
Sbjct: 259 YVIPAVTMMLLTLTVLWLDSRSTERMIAASVNL 291
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 23.4 bits (48), Expect = 3.9
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +2
Query: 680 SDGDTSKEKQNCYF---YLIPSIFIFIYLLNFLWTSTNNSR--TKLAKSVQLFSSFSETN 844
+D + +K C F Y+IP IFI ++ L + N+ + + AK + + S S +
Sbjct: 212 TDDEDTKVFVTCIFIWAYVIPLIFIILFYSRLLSSIRNHEKMLREQAKKMNVKSLVSNQD 271
Query: 845 EQQ 853
+++
Sbjct: 272 KER 274
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 23.4 bits (48), Expect = 3.9
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +2
Query: 680 SDGDTSKEKQNCYF---YLIPSIFIFIYLLNFLWTSTNNSR--TKLAKSVQLFSSFSETN 844
+D + +K C F Y+IP IFI ++ L + N+ + + AK + + S S +
Sbjct: 212 TDDEDTKVFVTCIFIWAYVIPLIFIILFYSRLLSSIRNHEKMLREQAKKMNVKSLVSNQD 271
Query: 845 EQQ 853
+++
Sbjct: 272 KER 274
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 6.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 949 RSRTGSYINNKKKPRVFLRLTNLYSIYVYKN 857
RSR + K+P++ L+N Y+ Y N
Sbjct: 66 RSRNRTEREKSKEPKIISSLSNNYNYNNYNN 96
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 6.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 949 RSRTGSYINNKKKPRVFLRLTNLYSIYVYKN 857
RSR + K+P++ L+N Y+ Y N
Sbjct: 66 RSRNRTEREKSKEPKIISSLSNNYNYNNYNN 96
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 6.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 949 RSRTGSYINNKKKPRVFLRLTNLYSIYVYKN 857
RSR + K+P++ L+N Y+ Y N
Sbjct: 66 RSRNRTEREKSKEPKIISSLSNNYNYNNYNN 96
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 6.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 949 RSRTGSYINNKKKPRVFLRLTNLYSIYVYKN 857
RSR + K+P++ L+N Y+ Y N
Sbjct: 66 RSRNRTEREKSKEPKIISSLSNNYNYNNYNN 96
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.6 bits (46), Expect = 6.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 949 RSRTGSYINNKKKPRVFLRLTNLYSIYVYKN 857
RSR + K+P++ L+N Y+ Y N
Sbjct: 299 RSRNRTEREKSKEPKIISSLSNNYNYNNYNN 329
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 6.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 949 RSRTGSYINNKKKPRVFLRLTNLYSIYVYKN 857
RSR + K+P++ L+N Y+ Y N
Sbjct: 299 RSRNRTEREKSKEPKIISSLSNNYNYNNYNN 329
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 6.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 949 RSRTGSYINNKKKPRVFLRLTNLYSIYVYKN 857
RSR + K+P++ L+N Y+ Y N
Sbjct: 299 RSRNRTEREKSKEPKIISSLSNNYNYNNYNN 329
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 6.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 949 RSRTGSYINNKKKPRVFLRLTNLYSIYVYKN 857
RSR + K+P++ L+N Y+ Y N
Sbjct: 299 RSRNRTEREKSKEPKIISSLSNNYNYNNYNN 329
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 6.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 949 RSRTGSYINNKKKPRVFLRLTNLYSIYVYKN 857
RSR + K+P++ L+N Y+ Y N
Sbjct: 299 RSRNRTEREKSKEPKIISSLSNNYNYNNYNN 329
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 6.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 949 RSRTGSYINNKKKPRVFLRLTNLYSIYVYKN 857
RSR + K+P++ L+N Y+ Y N
Sbjct: 288 RSRNRTEREKSKEPKIISSLSNNYNYNNYNN 318
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.6 bits (46), Expect = 6.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 736 HFHIYLPFKLSLD 774
+ H+Y P K+SLD
Sbjct: 998 NLHVYAPLKISLD 1010
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 9.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 949 RSRTGSYINNKKKPRVFLRLTNLYSIYVYKN 857
RSR + K+P++ L+N Y+ Y N
Sbjct: 66 RSRDRTERERSKEPKIISSLSNNYNYSNYNN 96
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 9.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 949 RSRTGSYINNKKKPRVFLRLTNLYSIYVYKN 857
RSR + K+P++ L+N Y+ Y N
Sbjct: 66 RSRDRTERERSKEPKIISSLSNNYNYSNYNN 96
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 9.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 949 RSRTGSYINNKKKPRVFLRLTNLYSIYVYKN 857
RSR + K+P++ L+N Y+ Y N
Sbjct: 66 RSRDRTERERSKEPKIISSLSNNYNYSNYNN 96
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 9.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 949 RSRTGSYINNKKKPRVFLRLTNLYSIYVYKN 857
RSR + K+P++ L+N Y+ Y N
Sbjct: 66 RSRDRTERERSKEPKIISSLSNNYNYSNYNN 96
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 9.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 949 RSRTGSYINNKKKPRVFLRLTNLYSIYVYKN 857
RSR + K+P++ L+N Y+ Y N
Sbjct: 66 RSRDRTERERSKEPKIISSLSNNYNYSNYNN 96
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 9.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 949 RSRTGSYINNKKKPRVFLRLTNLYSIYVYKN 857
RSR + K+P++ L+N Y+ Y N
Sbjct: 66 RSRDRTERERSKEPKIISSLSNNYNYSNYNN 96
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 9.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 233 RQRKTESSQTRRYRTYVKERRI 298
R+R E S+ +R R KER+I
Sbjct: 60 RERSKERSRDKRERERSKERKI 81
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 9.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 233 RQRKTESSQTRRYRTYVKERRI 298
R+R E S+ +R R KER+I
Sbjct: 60 RERSKERSRDKRERERSKERKI 81
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 279,229
Number of Sequences: 438
Number of extensions: 6537
Number of successful extensions: 60
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 40006332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -