Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_F07
         (1229 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   1.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   1.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   2.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   2.7  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   4.7  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    23   6.2  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   6.2  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   6.2  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 448 WNLVPVVVKLLYLASC 495
           WNL+P+ V +L  A+C
Sbjct: 922 WNLLPIAVFILVCATC 937


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 448 WNLVPVVVKLLYLASC 495
           WNL+P+ V +L  A+C
Sbjct: 922 WNLLPIAVFILVCATC 937


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 446 DETENTIASTTYSETSDKLVS*RFGLG 366
           DET+N  +  TY+E  +KL      LG
Sbjct: 340 DETKNHYSKNTYNEQGNKLADLYKSLG 366


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 446 DETENTIASTTYSETSDKLVS*RFGLG 366
           DET+N  +  TY+E  +KL      LG
Sbjct: 232 DETKNHYSKNTYNEQGNKLADLYKSLG 258


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = +3

Query: 645 DQQGKNGPKKPQP--DHILVTEP 707
           D Q +N PK+P+P  D   VT P
Sbjct: 322 DHQRRNEPKRPRPNIDRHEVTRP 344


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = +3

Query: 57  LQSWPCNNISKKRKFVGDGVFKAELNEFL 143
           L+ +  N++ K+R+ V + +FK E++E L
Sbjct: 70  LKRYKLNDLEKRRE-VYESIFKVEVHEAL 97


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = +3

Query: 57  LQSWPCNNISKKRKFVGDGVFKAELNEFL 143
           L+ +  N++ K+R+ V + +FK E++E L
Sbjct: 230 LKRYKLNDLEKRRE-VYESIFKVEVHEAL 257


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = +3

Query: 57  LQSWPCNNISKKRKFVGDGVFKAELNEFL 143
           L+ +  N++ K+R+ V + +FK E++E L
Sbjct: 230 LKRYKLNDLEKRRE-VYESIFKVEVHEAL 257


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,534
Number of Sequences: 336
Number of extensions: 4222
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35966350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)