Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_F05
         (1232 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    27   1.5  
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    24   7.9  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    24   7.9  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 26.6 bits (56), Expect = 1.5
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 796  YSDILRLSVKAPSKSFQPLQRLAGTNRQTTNVILVY 903
            Y D +  +  AP K FQP+  L+G  +    + L++
Sbjct: 1107 YLDGINYNCVAPGKRFQPMSNLSGGEKTIAALALLF 1142


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 24.2 bits (50), Expect = 7.9
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -2

Query: 832 MGLSLTVAVCHYIH*TRFHTSEMALKCCHSYN 737
           +GL L + VC YI    +  S      CH Y+
Sbjct: 346 IGLGLLLPVCRYIDVVEYIPSTRMNGLCHYYD 377


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 24.2 bits (50), Expect = 7.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 954 FVILK*PVLTTCIYVRYIHQNNICC 880
           FV++  PV+  C YV  +    ICC
Sbjct: 189 FVLIMLPVVVMCGYVCNLKVMTICC 213


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,030,477
Number of Sequences: 2352
Number of extensions: 21732
Number of successful extensions: 34
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 140608968
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)