Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_F04
         (1262 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M17886-1|AAA36471.1|  114|Homo sapiens protein ( Human acidic ri...    49   4e-05
CR450339-1|CAG29335.1|  114|Homo sapiens RPLP1 protein.                49   4e-05
BC007590-1|AAH07590.1|  114|Homo sapiens ribosomal protein, larg...    49   4e-05
BC003369-1|AAH03369.1|  114|Homo sapiens ribosomal protein, larg...    49   4e-05
AB061836-1|BAB79474.1|  114|Homo sapiens ribosomal protein P1 pr...    49   4e-05
CR542209-1|CAG47005.1|  114|Homo sapiens RPLP1 protein.                47   2e-04
AY303789-1|AAP68820.1|  113|Homo sapiens acidic ribosomal phosph...    46   2e-04

>M17886-1|AAA36471.1|  114|Homo sapiens protein ( Human acidic
           ribosomal phosphoprotein P1 mRNA, complete cds. ).
          Length = 114

 Score = 48.8 bits (111), Expect = 4e-05
 Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
 Frame = +2

Query: 197 TGAQISTILXXXXXXXXPXWPGLFAKALEGINVRXLITNIGSG--VXXXXXXXXXXXXXX 370
           T  +I+ ++        P WPGLFAKAL  +N+  LI N+G+G                 
Sbjct: 24  TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPS 83

Query: 371 XXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 463
                               SDDDMGFGLFD
Sbjct: 84  TAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114


>CR450339-1|CAG29335.1|  114|Homo sapiens RPLP1 protein.
          Length = 114

 Score = 48.8 bits (111), Expect = 4e-05
 Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
 Frame = +2

Query: 197 TGAQISTILXXXXXXXXPXWPGLFAKALEGINVRXLITNIGSG--VXXXXXXXXXXXXXX 370
           T  +I+ ++        P WPGLFAKAL  +N+  LI N+G+G                 
Sbjct: 24  TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPS 83

Query: 371 XXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 463
                               SDDDMGFGLFD
Sbjct: 84  TAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114


>BC007590-1|AAH07590.1|  114|Homo sapiens ribosomal protein, large,
           P1 protein.
          Length = 114

 Score = 48.8 bits (111), Expect = 4e-05
 Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
 Frame = +2

Query: 197 TGAQISTILXXXXXXXXPXWPGLFAKALEGINVRXLITNIGSG--VXXXXXXXXXXXXXX 370
           T  +I+ ++        P WPGLFAKAL  +N+  LI N+G+G                 
Sbjct: 24  TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPS 83

Query: 371 XXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 463
                               SDDDMGFGLFD
Sbjct: 84  TAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114


>BC003369-1|AAH03369.1|  114|Homo sapiens ribosomal protein, large,
           P1 protein.
          Length = 114

 Score = 48.8 bits (111), Expect = 4e-05
 Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
 Frame = +2

Query: 197 TGAQISTILXXXXXXXXPXWPGLFAKALEGINVRXLITNIGSG--VXXXXXXXXXXXXXX 370
           T  +I+ ++        P WPGLFAKAL  +N+  LI N+G+G                 
Sbjct: 24  TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPS 83

Query: 371 XXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 463
                               SDDDMGFGLFD
Sbjct: 84  TAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114


>AB061836-1|BAB79474.1|  114|Homo sapiens ribosomal protein P1
           protein.
          Length = 114

 Score = 48.8 bits (111), Expect = 4e-05
 Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
 Frame = +2

Query: 197 TGAQISTILXXXXXXXXPXWPGLFAKALEGINVRXLITNIGSG--VXXXXXXXXXXXXXX 370
           T  +I+ ++        P WPGLFAKAL  +N+  LI N+G+G                 
Sbjct: 24  TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPS 83

Query: 371 XXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 463
                               SDDDMGFGLFD
Sbjct: 84  TAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114


>CR542209-1|CAG47005.1|  114|Homo sapiens RPLP1 protein.
          Length = 114

 Score = 46.8 bits (106), Expect = 2e-04
 Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
 Frame = +2

Query: 197 TGAQISTILXXXXXXXXPXWPGLFAKALEGINVRXLITNIGSG--VXXXXXXXXXXXXXX 370
           T  +I+ ++        P WPGLFAKAL  +N+  LI ++G+G                 
Sbjct: 24  TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICDVGAGGPAPAAGAAPAGGPAPS 83

Query: 371 XXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 463
                               SDDDMGFGLFD
Sbjct: 84  TAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114


>AY303789-1|AAP68820.1|  113|Homo sapiens acidic ribosomal
           phosphoprotein P1 protein.
          Length = 113

 Score = 46.4 bits (105), Expect = 2e-04
 Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
 Frame = +2

Query: 197 TGAQISTILXXXXXXXXPXWPGLFAKALEGINVRXLITNIGSG--VXXXXXXXXXXXXXX 370
           T  +I+ ++        P WPGLFAKAL  +N+  LI N+G+G                 
Sbjct: 24  TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPS 83

Query: 371 XXXXXXXXXXXXXXXXXXXXSDDDMGFGLF 460
                               SDDDMGFGLF
Sbjct: 84  TAAAPAEEKKVEAKKEESEESDDDMGFGLF 113


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,885,512
Number of Sequences: 237096
Number of extensions: 589259
Number of successful extensions: 618
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18055163440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)