Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_F04
         (1262 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosom...    74   4e-13
AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p pro...    74   4e-13
AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA ...    74   4e-13
Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein ( Dros...    72   2e-12

>S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosomal
           protein rpA2 protein.
          Length = 112

 Score = 74.1 bits (174), Expect = 4e-13
 Identities = 41/89 (46%), Positives = 44/89 (49%)
 Frame = +2

Query: 197 TGAQISTILXXXXXXXXPXWPGLFAKALEGINVRXLITNIGSGVXXXXXXXXXXXXXXXX 376
           TG +I+TIL        P WPGLFAKALEGINV+ LITNIGSGV                
Sbjct: 24  TGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAA 83

Query: 377 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 463
                             SDDDMGFGLFD
Sbjct: 84  PAAESKKEEKKKEEESDQSDDDMGFGLFD 112


>AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p
           protein.
          Length = 112

 Score = 74.1 bits (174), Expect = 4e-13
 Identities = 41/89 (46%), Positives = 44/89 (49%)
 Frame = +2

Query: 197 TGAQISTILXXXXXXXXPXWPGLFAKALEGINVRXLITNIGSGVXXXXXXXXXXXXXXXX 376
           TG +I+TIL        P WPGLFAKALEGINV+ LITNIGSGV                
Sbjct: 24  TGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAA 83

Query: 377 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 463
                             SDDDMGFGLFD
Sbjct: 84  PAAESKKEEKKKEEESDQSDDDMGFGLFD 112


>AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA
           protein.
          Length = 112

 Score = 74.1 bits (174), Expect = 4e-13
 Identities = 41/89 (46%), Positives = 44/89 (49%)
 Frame = +2

Query: 197 TGAQISTILXXXXXXXXPXWPGLFAKALEGINVRXLITNIGSGVXXXXXXXXXXXXXXXX 376
           TG +I+TIL        P WPGLFAKALEGINV+ LITNIGSGV                
Sbjct: 24  TGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAA 83

Query: 377 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 463
                             SDDDMGFGLFD
Sbjct: 84  PAAESKKEEKKKEEESDQSDDDMGFGLFD 112


>Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for A-type ribosomal protein
           rp21C. ).
          Length = 112

 Score = 71.7 bits (168), Expect = 2e-12
 Identities = 40/89 (44%), Positives = 43/89 (48%)
 Frame = +2

Query: 197 TGAQISTILXXXXXXXXPXWPGLFAKALEGINVRXLITNIGSGVXXXXXXXXXXXXXXXX 376
           TG +I+TIL        P WPGLFAKALE INV+ LITNIGSGV                
Sbjct: 24  TGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLITNIGSGVGAAPAGGAAPAAAAAA 83

Query: 377 XXXXXXXXXXXXXXXXXXSDDDMGFGLFD 463
                             SDDDMGFGLFD
Sbjct: 84  PAAESKKEEKKKEEESDQSDDDMGFGLFD 112


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,644,323
Number of Sequences: 53049
Number of extensions: 194480
Number of successful extensions: 263
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6784243965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)