Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_F03
         (1253 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0299 - 17051570-17052474,17053542-17053755                       31   1.4  

>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -3

Query: 1047 PXFPXXXXFFXXXXPPPPPPXP 982
            P FP    F+    PPPPPP P
Sbjct: 308  PHFPPLPSFYPSPPPPPPPPPP 329



 Score = 29.9 bits (64), Expect = 4.4
 Identities = 24/86 (27%), Positives = 24/86 (27%)
 Frame = -3

Query: 1041 FPXXXXFFXXXXPPPPPPXPXXXXXXXFFFXXFFXXXXXXPXXPXXSXFXXXXXFFPPXX 862
            FP     F    PPPPPP           F   F      P  P    F       PP  
Sbjct: 277  FPHLPPIFSPPSPPPPPPPA---------FPFPFPQLPPLPHFPPLPSFYPSPPPPPPPP 327

Query: 861  XWXXPXXPXFFFFXGPXXPPXKGXPP 784
                P  P  F    P  PP    PP
Sbjct: 328  PPPPPSFPWPFPPLAPLFPPYPSPPP 353


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,965,920
Number of Sequences: 37544
Number of extensions: 314676
Number of successful extensions: 6396
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5278
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3876004116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)