Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_F02
         (1199 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024876-4|AAU05555.1|  825|Caenorhabditis elegans Hypothetical ...    32   0.70 
U10438-1|AAA19083.3|  524|Caenorhabditis elegans Hypothetical pr...    32   0.93 
DQ340624-1|ABC65812.1|  524|Caenorhabditis elegans chondroitin p...    32   0.93 
Z32840-1|CAA83679.1|  584|Caenorhabditis elegans Hypothetical pr...    31   1.2  
DQ340623-1|ABC65811.1|  584|Caenorhabditis elegans chondroitin p...    31   1.2  
AF024502-1|AAK77624.1|  416|Caenorhabditis elegans Hypothetical ...    31   1.2  
Z81028-3|CAB02691.1|  545|Caenorhabditis elegans Hypothetical pr...    30   2.8  
Z81506-1|CAB04128.1|  555|Caenorhabditis elegans Hypothetical pr...    30   3.7  
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr...    29   4.9  
AF003135-8|AAK18984.1|  235|Caenorhabditis elegans Hypothetical ...    29   4.9  
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p...    29   6.5  
U42835-2|AAA83586.1|  617|Caenorhabditis elegans Chitinase prote...    29   8.6  

>AC024876-4|AAU05555.1|  825|Caenorhabditis elegans Hypothetical
           protein Y94H6A.5a protein.
          Length = 825

 Score = 32.3 bits (70), Expect = 0.70
 Identities = 20/83 (24%), Positives = 38/83 (45%)
 Frame = -1

Query: 311 KEQGGK*NPRIFQXHRKVQGRPRXQRLKDWIECEXPAGRPWRKHDHRRRXGTGXNXGAKR 132
           K +GG  +  +    + ++GR + ++L++++E    +    +K +H  R G G   G  R
Sbjct: 738 KPKGGPKHSELKNKEQILKGRRKQEQLENYMEHRRQSNLK-KKAEHLGRGGAGGARGGAR 796

Query: 131 EGXXEXARIGAGXDRXXXGQAGG 63
            G    AR G+        + GG
Sbjct: 797 GGARGGARGGSSRGARGGARGGG 819


>U10438-1|AAA19083.3|  524|Caenorhabditis elegans Hypothetical
           protein B0280.5 protein.
          Length = 524

 Score = 31.9 bits (69), Expect = 0.93
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = +2

Query: 314 DAIGNPLNNVINYKYX-GNC--YYFFSCEQNRAXLLSCDIGLAFDPTTGRCV 460
           + + N   N+ +  Y  G C  YYFF C  N A  LSC   L +D  + +C+
Sbjct: 132 ETVENVCENLEDGAYSSGGCTTYYFF-CTTNTARFLSCPTPLFYDADSQKCI 182


>DQ340624-1|ABC65812.1|  524|Caenorhabditis elegans chondroitin
           proteoglycan-2 protein.
          Length = 524

 Score = 31.9 bits (69), Expect = 0.93
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = +2

Query: 314 DAIGNPLNNVINYKYX-GNC--YYFFSCEQNRAXLLSCDIGLAFDPTTGRCV 460
           + + N   N+ +  Y  G C  YYFF C  N A  LSC   L +D  + +C+
Sbjct: 132 ETVENVCENLEDGAYSSGGCTTYYFF-CTTNTARFLSCPTPLFYDADSQKCI 182


>Z32840-1|CAA83679.1|  584|Caenorhabditis elegans Hypothetical
           protein C07G2.1a protein.
          Length = 584

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 374 YFFSCEQNRAXLLSCDIGLAFDPTTGRCVDADRV-QCNAT 490
           ++ +C   +  +  C+ GL F P   RC  AD++ +C+ T
Sbjct: 540 HYKNCVNGQEAIFICENGLFFSPEQARCAPADQIAECHQT 579


>DQ340623-1|ABC65811.1|  584|Caenorhabditis elegans chondroitin
           proteoglycan-1 protein.
          Length = 584

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 374 YFFSCEQNRAXLLSCDIGLAFDPTTGRCVDADRV-QCNAT 490
           ++ +C   +  +  C+ GL F P   RC  AD++ +C+ T
Sbjct: 540 HYKNCVNGQEAIFICENGLFFSPEQARCAPADQIAECHQT 579


>AF024502-1|AAK77624.1|  416|Caenorhabditis elegans Hypothetical
           protein M151.7 protein.
          Length = 416

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +3

Query: 219 NPVLQPLXPGPTLYLPVXLKNSWVSLAPLLLWMLSA 326
           NP+LQPL  G   ++P+   N   S APLL  +L+A
Sbjct: 17  NPMLQPLPMGLPPFVPMDFPNHASSTAPLLSSLLNA 52


>Z81028-3|CAB02691.1|  545|Caenorhabditis elegans Hypothetical
           protein B0365.6 protein.
          Length = 545

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 284 LGFTCPPAPLDAIGNPLNNVINYKYXGNCYY 376
           L F C  AP     +P+ +  +++Y GNCYY
Sbjct: 145 LNFICETAPT----SPITDTCSFQYNGNCYY 171


>Z81506-1|CAB04128.1|  555|Caenorhabditis elegans Hypothetical
           protein F16H6.1 protein.
          Length = 555

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +2

Query: 263 SCXAEKFLGFTCPPAPLDAI--GNPLNNVINYKYXGNCYY 376
           S  A K+L   C    L+ I    P+ N   ++Y GNCYY
Sbjct: 139 SSSAGKWLSGDCDAMILNFICETTPITNTCTFQYNGNCYY 178


>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
            H02I12.1 protein.
          Length = 1319

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +2

Query: 149  CXQSRTCVGGRAFAMVCPPGPRIQSSPSAAVXWADLVPSCXAE 277
            C     CV GR   M CP G  + +   +   W   VPSC  +
Sbjct: 1258 CEVFYRCVWGRKVVMTCPSG-TVFNPLLSVCDWPSAVPSCSGQ 1299



 Score = 28.7 bits (61), Expect = 8.6
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 365  NCYYFFSCEQNRAXLLSCDIGLAFDPTTGRC 457
            NC  F+ C   R  +++C  G  F+P    C
Sbjct: 1257 NCEVFYRCVWGRKVVMTCPSGTVFNPLLSVC 1287


>AF003135-8|AAK18984.1|  235|Caenorhabditis elegans Hypothetical
           protein W03F11.1 protein.
          Length = 235

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 377 FFSCEQNRAXLLSCDIGLAFDPTTGRC 457
           F+ CE  R  +++C I   +D TTG C
Sbjct: 35  FWKCEGGRWIVVTCQINYFYDATTGFC 61


>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
           protein C39D10.7 protein.
          Length = 1185

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 377 FFSCEQNRAXLLSCDIGLAFDPTTGRCVDADRVQCN 484
           FF+C   RA    C   L F+  TG C  A+  + N
Sbjct: 450 FFTCHDGRAFANDCPGDLVFNKATGTCDFAENCEKN 485


>U42835-2|AAA83586.1|  617|Caenorhabditis elegans Chitinase protein
           1 protein.
          Length = 617

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 12/47 (25%), Positives = 20/47 (42%)
 Frame = +2

Query: 350 YKYXGNCYYFFSCEQNRAXLLSCDIGLAFDPTTGRCVDADRVQCNAT 490
           Y    NC  F  C  +++  +SC  GL +  +   C  +    C+ T
Sbjct: 489 YPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYCTTSTASGCSVT 535


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,514,908
Number of Sequences: 27780
Number of extensions: 234630
Number of successful extensions: 553
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3297288728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)