Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_E21
         (1318 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73098-5|CAA97332.1|  103|Caenorhabditis elegans Hypothetical pr...   111   8e-25
Z46242-10|CAA86333.2|  113|Caenorhabditis elegans Hypothetical p...    87   3e-17

>Z73098-5|CAA97332.1|  103|Caenorhabditis elegans Hypothetical
           protein T21C9.4 protein.
          Length = 103

 Score =  111 bits (268), Expect = 8e-25
 Identities = 48/92 (52%), Positives = 65/92 (70%)
 Frame = +1

Query: 175 MSHTILLVQPGPRPETRTYXDYESVXDCMEGVCKIYEEHLKRRXPNTPTITYDISQLFDX 354
           MSHTILL+QP    E+R++ DYE+  +C+EG+C++YEE+LK++ P    ITYDIS LF+ 
Sbjct: 1   MSHTILLLQPTDNIESRSWSDYENTTECLEGICRVYEEYLKKKVPAQNEITYDISHLFEF 60

Query: 355 VDQXADLSCLVYXKSTNTYAPXNKDXIKEKIY 450
           +D   DLS LV   +T TY P NK  +KE IY
Sbjct: 61  IDDLKDLSMLVLDNTTYTYVPHNKQYVKESIY 92


>Z46242-10|CAA86333.2|  113|Caenorhabditis elegans Hypothetical
           protein F35G12.11 protein.
          Length = 113

 Score = 86.6 bits (205), Expect = 3e-17
 Identities = 33/91 (36%), Positives = 64/91 (70%)
 Frame = +1

Query: 178 SHTILLVQPGPRPETRTYXDYESVXDCMEGVCKIYEEHLKRRXPNTPTITYDISQLFDXV 357
           SHT+LL+Q  PR ++RT+ DYESV D ++ +CK++E+ L ++  +   +TYD+SQ+++ +
Sbjct: 5   SHTVLLIQTSPRLDSRTWGDYESVTDALDALCKMFEDFLSKK--SAAPVTYDVSQVYEFL 62

Query: 358 DQXADLSCLVYXKSTNTYAPXNKDXIKEKIY 450
           D+ +D+S +++ + T  Y    +  IK+++Y
Sbjct: 63  DKLSDVSMMIFNRETGQYIGRTRAWIKQQVY 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,522,008
Number of Sequences: 27780
Number of extensions: 147418
Number of successful extensions: 287
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 286
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3683964012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)