Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_E19
         (1192 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   1.8  
12_01_0816 + 7502669-7503145                                           29   7.2  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    29   7.2  
04_04_1016 - 30139691-30139951,30140066-30140134,30141267-301414...    29   9.5  
04_04_1009 - 30078988-30079248,30079363-30079431,30080564-300807...    29   9.5  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +3

Query: 570 CWRFXIGSAPLTSITKIDAQXXGGETRQDYKDTRRXPLEAPSCALLFRPCRLP 728
           CWR  +        T  D Q    +    +KD    P + PSC L+F P   P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335


>12_01_0816 + 7502669-7503145
          Length = 158

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -3

Query: 869 RRSGRAERGVRAHSPAWSERPTPN*DTYSVSYEKAPRFPKGERR 738
           R SG  +R V    PAW ER   + ++ +V  E+A      ERR
Sbjct: 8   RSSGEGDRPVARWWPAWQEREKESLESSAVEGERATAEVGSERR 51


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 351 NESAN---ARGEAVCXLGALPLPRSLTRCAR 434
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>04_04_1016 -
           30139691-30139951,30140066-30140134,30141267-30141470,
           30141552-30141808,30141899-30141983,30142080-30142164,
           30142269-30142795
          Length = 495

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = -3

Query: 971 AXXPRFGNPXNQWLLPVAISRVLPGWTQDDSYRIRRSGRAERGVRAHSP 825
           A  P  GNP +  LL  A + +      DD + + R+GR ERGV A  P
Sbjct: 79  AAPPWGGNPGSNTLLGDAATVIC----LDDYHSLDRAGRKERGVTALDP 123


>04_04_1009 -
           30078988-30079248,30079363-30079431,30080564-30080767,
           30080849-30081105,30081196-30081280,30081377-30081461,
           30081566-30082092
          Length = 495

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = -3

Query: 971 AXXPRFGNPXNQWLLPVAISRVLPGWTQDDSYRIRRSGRAERGVRAHSP 825
           A  P  GNP +  LL  A + +      DD + + R+GR ERGV A  P
Sbjct: 79  AAPPWGGNPGSNTLLGDAATVIC----LDDYHSLDRAGRKERGVTALDP 123


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,933,011
Number of Sequences: 37544
Number of extensions: 490783
Number of successful extensions: 1232
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3631571424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)