Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_E18
(1234 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 48 2e-06
SPAC2F3.02 |||ER protein translocation subcomplex subunit|Schizo... 38 0.004
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 37 0.007
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 34 0.035
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 31 0.33
SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces po... 30 0.76
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 30 0.76
SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 1.8
SPBC36.02c |||spermidine family transporter |Schizosaccharomyces... 29 1.8
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 27 5.3
SPCC1020.09 |||WD repeat protein, human WDR79 family|Schizosacch... 27 7.1
SPBC2D10.16 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 9.3
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 26 9.3
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 9.3
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 48.4 bits (110), Expect = 2e-06
Identities = 34/109 (31%), Positives = 52/109 (47%)
Frame = +1
Query: 679 DLIPTLKEKGNRLYGEKKYDEAEEAYNEALAICEQLMIRERKGDEEWININELKIPILLN 858
++ +E GN + K+Y +AEE Y +ALA ++ GD++ ++I N
Sbjct: 62 EVAQNFREHGNECFASKRYKDAEEFYTKALA--------QKCGDKD------IEIACYSN 107
Query: 859 YAQCKLLKGEYYAVIEHXNTVLEFDKDNEKALYRRAKAHIGAWXPDXAE 1005
A C LL Y V+ VL+ D + KA YR AKA + D A+
Sbjct: 108 RAACNLLFENYRQVLNDCAQVLQRDSTHAKAYYRSAKALVALKRYDEAK 156
>SPAC2F3.02 |||ER protein translocation subcomplex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 192
Score = 37.5 bits (83), Expect = 0.004
Identities = 24/93 (25%), Positives = 43/93 (46%)
Frame = +1
Query: 694 LKEKGNRLYGEKKYDEAEEAYNEALAICEQLMIRERKGDEEWININELKIPILLNYAQCK 873
+K+ N + KKY+EA++ Y AL QL + + + E + +L N A +
Sbjct: 65 MKQTANEAFKRKKYEEAKKLYGLAL----QLALNRCTWEPSILTREEASV-MLCNRAAAE 119
Query: 874 LLKGEYYAVIEHXNTVLEFDKDNEKALYRRAKA 972
+ ++ + N L+ + K YR+AKA
Sbjct: 120 IALSQFPEALADANAALKIRNNYGKCYYRKAKA 152
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 36.7 bits (81), Expect = 0.007
Identities = 31/112 (27%), Positives = 47/112 (41%)
Frame = +1
Query: 640 EREMWQLSIQERIDLIPTLKEKGNRLYGEKKYDEAEEAYNEALAICEQLMIRERKGDEEW 819
E + ++ +ER L LK GN+ YG+K+Y A + Y +A+ C I
Sbjct: 136 EESVKSMTKEERAKLAAELKTLGNKAYGQKEYANAIDYYTQAIT-CSHDPI--------- 185
Query: 820 ININELKIPILLNYAQCKLLKGEYYAVIEHXNTVLEFDKDNEKALYRRAKAH 975
N A C G++ VI+ + L D KAL RR+ A+
Sbjct: 186 ---------FFSNRAACYAAIGDFEQVIKDTSEALSLDSSYVKALNRRSAAY 228
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 34.3 bits (75), Expect = 0.035
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = +1
Query: 661 SIQERIDLIPTLKEKGNRLYGEKKYDEAEEAYNEAL 768
S QE +L K GN Y EKKY EA +AY EA+
Sbjct: 15 SQQEPAELAEKQKAIGNAFYKEKKYAEAIKAYTEAI 50
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 670 ERIDLIPTLKEKGNRLYGEKKYDEAEEAYNEALAI 774
+++ + K +GN L+ + Y +A E Y+EAL I
Sbjct: 218 KQVRKLENTKNQGNDLFRQGNYQDAYEKYSEALQI 252
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 31.1 bits (67), Expect = 0.33
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 877 LKGEYYAV-IEHXNTVLEFDKDNEKALYRRAKAHIGAWXPDXA 1002
LK E Y + I + +E D + KA +RRA AHI + P A
Sbjct: 50 LKSEDYGLAINDASKAIECDPEYAKAYFRRATAHIAIFQPKEA 92
>SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 471
Score = 29.9 bits (64), Expect = 0.76
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 679 DLIPTLKEKGNRLYGEKKYDEAEEAYNEALAICEQLMIRERKGDEEW 819
D+IP L +K N+L+ + EE N L E+ + E+W
Sbjct: 268 DIIPLLVQKENKLFDDSDQSVLEETINNTLKPFEEPIAEGNADIEDW 314
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 29.9 bits (64), Expect = 0.76
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 685 IPTLKEKGNRLYGEKKYDEAEEAYNEALAICEQL 786
I L +GN Y +K Y+EA + Y +AL E +
Sbjct: 32 IEQLVTQGNMAYAQKNYEEAVDKYGQALMQSESI 65
>SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 230
Score = 28.7 bits (61), Expect = 1.8
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = -2
Query: 834 FVYINPFFITFSFPDHKLFTYSKCFIVCLLCFIIFLFSVQPVAFLF*CWNQIYSLLYT*L 655
F + FF++FSF LF S+ FIV F I F + F F C S L++ L
Sbjct: 119 FFFFLLFFLSFSFSFSFLFFLSQIFIVYFSSFPILHF----LFFFFLCVCVFLSFLFS-L 173
Query: 654 PHL 646
HL
Sbjct: 174 SHL 176
>SPBC36.02c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 28.7 bits (61), Expect = 1.8
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Frame = -1
Query: 724 LRTTCCLSLLMLESNLFSPVYL----AATSLFHIHLNVPL 617
L+TTC L+ + L S+ S V+ A T++FHI L V L
Sbjct: 135 LKTTCILAYVALCSSFASSVFAVPAEAITTVFHISLTVSL 174
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 27.1 bits (57), Expect = 5.3
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +1
Query: 694 LKEKGNRLYGEKKYDEAEEAYNEALAICEQLMIRERKGDEEWININELKIPILLNYAQCK 873
+K+ N L Y +A E + LA ++E EWI+ ++ ++NY +
Sbjct: 112 IKDAQNYLNKYASYFQAHEPTLQKLAKFGSFKLKETPNVHEWIDQRQVHFTSMINYRTSQ 171
Query: 874 L 876
L
Sbjct: 172 L 172
>SPCC1020.09 |||WD repeat protein, human WDR79
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 399
Score = 26.6 bits (56), Expect = 7.1
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 289 GQASVLIDXSXKIGKKEPMVLVLGHKFKLEVWE 387
G + L + + G KEP++ + H +K+ +WE
Sbjct: 173 GDKNCLHHFNIRTGCKEPVMTTVTHGYKVPLWE 205
>SPBC2D10.16 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 135
Score = 26.2 bits (55), Expect = 9.3
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -2
Query: 432 HKTRDFSNGHHFNYRLPYFKFEFMT*YQHHRLLFT 328
+K D +G FN+R+ ++ E M Y ++FT
Sbjct: 77 NKIIDMQDGKRFNHRMCFYVVEEMKDYMRLSIIFT 111
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.2 bits (55), Expect = 9.3
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 664 IQERIDLIPTLKEKGNRLYGEKKYDEA-EEAYNEALAICEQLMIRERKGDE 813
+QER+D++ L ++ LY K+DE +EA + EQ + R+ D+
Sbjct: 223 MQERLDILTNLLDELTLLYETDKFDETMKEAILSFEDLKEQEIRRKVSSDD 273
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 26.2 bits (55), Expect = 9.3
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 562 LDEIITKPCDLEFIIELLKVEHSD-EYEREMWQLSIQERIDLIPTLKEKGNRLYGEKKYD 738
LDE ++K LE IE LK + S+ E ER L+ ER L+ LK G + +
Sbjct: 978 LDETLSKSSKLEADIEHLKNKVSEVEVERNA-LLASNER--LMDDLKNNGENIASLQTEI 1034
Query: 739 EAEEAYNEAL 768
E + A N+ L
Sbjct: 1035 EKKRAENDDL 1044
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,795,871
Number of Sequences: 5004
Number of extensions: 75110
Number of successful extensions: 191
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 669373152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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