Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_E14
         (1207 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0203 + 1555471-1555523,1555743-1555863,1556340-1556651,155...    30   3.2  
04_04_0861 + 28836544-28836609,28838191-28838264,28838551-288386...    30   3.2  
09_05_0015 - 20083143-20083308,20083645-20084017,20084362-200846...    29   7.3  
02_05_0303 + 27717097-27717149,27717515-27717635,27717746-277180...    29   7.3  

>06_01_0203 + 1555471-1555523,1555743-1555863,1556340-1556651,
            1556806-1556910,1557009-1557466,1557886-1558187,
            1558300-1558481,1558893-1559083,1559248-1559381,
            1559487-1559725
          Length = 698

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -1

Query: 1051 YHSFSXTIXIINVYIYXXRTYFVLXTSXSYT 959
            YH  S  + ++N ++Y   TY ++ T+  Y+
Sbjct: 246  YHFMSLMLNLVNTFLYMVNTYIIVPTADDYS 276


>04_04_0861 + 28836544-28836609,28838191-28838264,28838551-28838671,
            28838832-28839143,28839241-28839345,28839447-28839901,
            28840116-28840417,28840589-28840767,28841256-28841446,
            28841595-28841728,28841875-28842113
          Length = 725

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -1

Query: 1069 LXSKHXYHSFSXTIXIINVYIYXXRTYFVLXTSXSY 962
            L     YH  S  + ++N ++Y   TY ++ T+  Y
Sbjct: 268  LVDDQSYHFMSLILNLVNTFLYMVNTYIIVPTADDY 303


>09_05_0015 - 20083143-20083308,20083645-20084017,20084362-20084675,
            20085164-20085512,20085678-20085837,20086307-20086618,
            20086700-20086820,20087225-20087277
          Length = 615

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 1051 YHSFSXTIXIINVYIYXXRTYFVLXTSXSY 962
            YH  S  + + N ++Y   TY V+ T+  Y
Sbjct: 228  YHLMSLVLNLANTFLYMVNTYIVVPTADGY 257


>02_05_0303 + 27717097-27717149,27717515-27717635,27717746-27718057,
            27718172-27718276,27718367-27718821,27718964-27719094,
            27719215-27719268,27719378-27719747,27719848-27719981,
            27720081-27720319
          Length = 657

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -1

Query: 1069 LXSKHXYHSFSXTIXIINVYIYXXRTYFVLXTSXSYT 959
            L     YH  S  + + N ++Y   TY ++ T+  Y+
Sbjct: 239  LVDDQSYHFMSLLLNLANTFLYMVNTYIIVPTADDYS 275


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,674,795
Number of Sequences: 37544
Number of extensions: 320069
Number of successful extensions: 465
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3689769684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)