Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_E13
(1254 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y17392-1|CAA76759.1| 122|Homo sapiens prefoldin subunit 1 protein. 84 9e-16
AK223394-1|BAD97114.1| 122|Homo sapiens prefoldin 1 variant pro... 84 9e-16
BC011869-1|AAH11869.1| 122|Homo sapiens prefoldin subunit 1 pro... 84 1e-15
BC006202-1|AAH06202.1| 122|Homo sapiens prefoldin subunit 1 pro... 84 1e-15
BC003620-1|AAH03620.1| 122|Homo sapiens prefoldin subunit 1 pro... 84 1e-15
BX571742-1|CAE11868.1| 902|Homo sapiens hypothetical protein pr... 32 3.8
BC040956-1|AAH40956.1| 699|Homo sapiens zinc finger CCCH-type, ... 32 3.8
BC033105-1|AAH33105.1| 699|Homo sapiens zinc finger CCCH-type, ... 32 3.8
BC025308-1|AAH25308.1| 699|Homo sapiens zinc finger CCCH-type, ... 32 3.8
BC002935-1|AAH02935.1| 447|Homo sapiens ZC3HAV1 protein protein. 32 3.8
BC146778-1|AAI46779.1| 1555|Homo sapiens PCF11, cleavage and pol... 31 8.8
BC065384-1|AAH65384.2| 1555|Homo sapiens PCF11, cleavage and pol... 31 8.8
AF046935-1|AAC03107.1| 725|Homo sapiens PCF11p homolog protein. 31 8.8
AB020631-1|BAA74847.1| 1644|Homo sapiens KIAA0824 protein protein. 31 8.8
>Y17392-1|CAA76759.1| 122|Homo sapiens prefoldin subunit 1 protein.
Length = 122
Score = 84.2 bits (199), Expect = 9e-16
Identities = 44/120 (36%), Positives = 66/120 (55%)
Frame = +3
Query: 144 MAKTVDLALKQAFVDLQVLMIETKKXIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKT 323
MA VDL LK+AF +LQ +I+T++ ++ D Q+ L R + H +LT EI L T
Sbjct: 1 MAAPVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNM 60
Query: 324 YESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 503
YE + RMF+ E I L +K +I +L +K L L E+E NIR+++ +R
Sbjct: 61 YEGVGRMFILQSKEAIHSQLLEKQKIAEEKIKELEQKKSYLERRLKEAEDNIREMLMARR 120
>AK223394-1|BAD97114.1| 122|Homo sapiens prefoldin 1 variant
protein.
Length = 122
Score = 84.2 bits (199), Expect = 9e-16
Identities = 43/120 (35%), Positives = 67/120 (55%)
Frame = +3
Query: 144 MAKTVDLALKQAFVDLQVLMIETKKXIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKT 323
MA VDL LK+AF +LQ +I+T++ ++ D Q+ L R + H +LT EI L T
Sbjct: 1 MAAPVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNM 60
Query: 324 YESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 503
YE + RMF+ E I L +K +I +L +K L ++ E+E NIR+++ +R
Sbjct: 61 YEGVGRMFILQSKEAIHSQLLEKQKVAEEKIKELEQKKSYLERSVKEAEDNIREMLMARR 120
>BC011869-1|AAH11869.1| 122|Homo sapiens prefoldin subunit 1
protein.
Length = 122
Score = 83.8 bits (198), Expect = 1e-15
Identities = 43/120 (35%), Positives = 67/120 (55%)
Frame = +3
Query: 144 MAKTVDLALKQAFVDLQVLMIETKKXIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKT 323
MA VDL LK+AF +LQ +I+T++ ++ D Q+ L R + H +LT EI L T
Sbjct: 1 MAAPVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNM 60
Query: 324 YESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 503
YE + RMF+ E I L +K +I +L +K L ++ E+E NIR+++ +R
Sbjct: 61 YEGVGRMFILQSKEAIHSQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREMLMARR 120
>BC006202-1|AAH06202.1| 122|Homo sapiens prefoldin subunit 1
protein.
Length = 122
Score = 83.8 bits (198), Expect = 1e-15
Identities = 43/120 (35%), Positives = 67/120 (55%)
Frame = +3
Query: 144 MAKTVDLALKQAFVDLQVLMIETKKXIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKT 323
MA VDL LK+AF +LQ +I+T++ ++ D Q+ L R + H +LT EI L T
Sbjct: 1 MAAPVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNM 60
Query: 324 YESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 503
YE + RMF+ E I L +K +I +L +K L ++ E+E NIR+++ +R
Sbjct: 61 YEGVGRMFILQSKEAIHSQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREMLMARR 120
>BC003620-1|AAH03620.1| 122|Homo sapiens prefoldin subunit 1
protein.
Length = 122
Score = 83.8 bits (198), Expect = 1e-15
Identities = 43/120 (35%), Positives = 67/120 (55%)
Frame = +3
Query: 144 MAKTVDLALKQAFVDLQVLMIETKKXIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKT 323
MA VDL LK+AF +LQ +I+T++ ++ D Q+ L R + H +LT EI L T
Sbjct: 1 MAAPVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNM 60
Query: 324 YESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 503
YE + RMF+ E I L +K +I +L +K L ++ E+E NIR+++ +R
Sbjct: 61 YEGVGRMFILQSKEAIHSQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREMLMARR 120
>BX571742-1|CAE11868.1| 902|Homo sapiens hypothetical protein
protein.
Length = 902
Score = 32.3 bits (70), Expect = 3.8
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 270 HTNLTQREIDVLPPGTKTYESMARMFVQSD--LEHIKQNLRQKTNTLISRIDDLNNRKVC 443
H ++ I P ++ ++ R+ +D + + +L T+T SR+DD ++ ++C
Sbjct: 454 HREISSPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSSRVDDHDSEEIC 513
Query: 444 LNH 452
L+H
Sbjct: 514 LDH 516
>BC040956-1|AAH40956.1| 699|Homo sapiens zinc finger CCCH-type,
antiviral 1 protein.
Length = 699
Score = 32.3 bits (70), Expect = 3.8
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 270 HTNLTQREIDVLPPGTKTYESMARMFVQSD--LEHIKQNLRQKTNTLISRIDDLNNRKVC 443
H ++ I P ++ ++ R+ +D + + +L T+T SR+DD ++ ++C
Sbjct: 454 HREISSPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSSRVDDHDSEEIC 513
Query: 444 LNH 452
L+H
Sbjct: 514 LDH 516
>BC033105-1|AAH33105.1| 699|Homo sapiens zinc finger CCCH-type,
antiviral 1 protein.
Length = 699
Score = 32.3 bits (70), Expect = 3.8
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 270 HTNLTQREIDVLPPGTKTYESMARMFVQSD--LEHIKQNLRQKTNTLISRIDDLNNRKVC 443
H ++ I P ++ ++ R+ +D + + +L T+T SR+DD ++ ++C
Sbjct: 454 HREISSPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSSRVDDHDSEEIC 513
Query: 444 LNH 452
L+H
Sbjct: 514 LDH 516
>BC025308-1|AAH25308.1| 699|Homo sapiens zinc finger CCCH-type,
antiviral 1 protein.
Length = 699
Score = 32.3 bits (70), Expect = 3.8
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 270 HTNLTQREIDVLPPGTKTYESMARMFVQSD--LEHIKQNLRQKTNTLISRIDDLNNRKVC 443
H ++ I P ++ ++ R+ +D + + +L T+T SR+DD ++ ++C
Sbjct: 454 HREISSPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSSRVDDHDSEEIC 513
Query: 444 LNH 452
L+H
Sbjct: 514 LDH 516
>BC002935-1|AAH02935.1| 447|Homo sapiens ZC3HAV1 protein protein.
Length = 447
Score = 32.3 bits (70), Expect = 3.8
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 270 HTNLTQREIDVLPPGTKTYESMARMFVQSD--LEHIKQNLRQKTNTLISRIDDLNNRKVC 443
H ++ I P ++ ++ R+ +D + + +L T+T SR+DD ++ ++C
Sbjct: 154 HREISSPRIQDAGPASRDVQATGRIADDADPRVALVNDSLSDVTSTTSSRVDDHDSEEIC 213
Query: 444 LNH 452
L+H
Sbjct: 214 LDH 216
>BC146778-1|AAI46779.1| 1555|Homo sapiens PCF11, cleavage and
polyadenylation factor subunit, homolog (S. cerevisiae)
protein.
Length = 1555
Score = 31.1 bits (67), Expect = 8.8
Identities = 21/85 (24%), Positives = 43/85 (50%)
Frame = +3
Query: 279 LTQREIDVLPPGTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTL 458
+T++E+D L +K+ +S + +++ L H K Q++ ++ R+ D+N R L L
Sbjct: 352 ITKKELDQLDSKSKS-KSKSPSPLKNKLSHTKDLKNQESESM--RLSDMNKRDPRLKKHL 408
Query: 459 NESESNIRDLIQQKRMKNENQPAAE 533
+ D +++KR E + E
Sbjct: 409 QDKTDGKDDDVKEKRKTAEKKDKDE 433
>BC065384-1|AAH65384.2| 1555|Homo sapiens PCF11, cleavage and
polyadenylation factor subunit, homolog (S. cerevisiae)
protein.
Length = 1555
Score = 31.1 bits (67), Expect = 8.8
Identities = 21/85 (24%), Positives = 43/85 (50%)
Frame = +3
Query: 279 LTQREIDVLPPGTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTL 458
+T++E+D L +K+ +S + +++ L H K Q++ ++ R+ D+N R L L
Sbjct: 352 ITKKELDQLDSKSKS-KSKSPSPLKNKLSHTKDLKNQESESM--RLSDMNKRDPRLKKHL 408
Query: 459 NESESNIRDLIQQKRMKNENQPAAE 533
+ D +++KR E + E
Sbjct: 409 QDKTDGKDDDVKEKRKTAEKKDKDE 433
>AF046935-1|AAC03107.1| 725|Homo sapiens PCF11p homolog protein.
Length = 725
Score = 31.1 bits (67), Expect = 8.8
Identities = 21/85 (24%), Positives = 43/85 (50%)
Frame = +3
Query: 279 LTQREIDVLPPGTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTL 458
+T++E+D L +K+ +S + +++ L H K Q++ ++ R+ D+N R L L
Sbjct: 352 ITKKELDQLDSKSKS-KSKSPSPLKNKLSHTKDLKNQESESM--RLSDMNKRDPRLKKHL 408
Query: 459 NESESNIRDLIQQKRMKNENQPAAE 533
+ D +++KR E + E
Sbjct: 409 QDKTDGKDDDVKEKRKTAEKKDKDE 433
>AB020631-1|BAA74847.1| 1644|Homo sapiens KIAA0824 protein protein.
Length = 1644
Score = 31.1 bits (67), Expect = 8.8
Identities = 21/85 (24%), Positives = 43/85 (50%)
Frame = +3
Query: 279 LTQREIDVLPPGTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTL 458
+T++E+D L +K+ +S + +++ L H K Q++ ++ R+ D+N R L L
Sbjct: 441 ITKKELDQLDSKSKS-KSKSPSPLKNKLSHTKDLKNQESESM--RLSDMNKRDPRLKKHL 497
Query: 459 NESESNIRDLIQQKRMKNENQPAAE 533
+ D +++KR E + E
Sbjct: 498 QDKTDGKDDDVKEKRKTAEKKDKDE 522
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,481,735
Number of Sequences: 237096
Number of extensions: 2033764
Number of successful extensions: 3851
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3851
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17890024750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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