Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_E13
         (1254 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73103-1|CAA97424.1|  117|Caenorhabditis elegans Hypothetical pr...    44   2e-04
U58735-1|AAC48148.1|  891|Caenorhabditis elegans Hypothetical pr...    30   4.0  
U39849-8|AAA81050.1|  479|Caenorhabditis elegans Hypothetical pr...    29   5.2  
Z82270-3|CAB63205.1|  667|Caenorhabditis elegans Hypothetical pr...    29   6.9  
Z73427-8|CAA97804.1|  302|Caenorhabditis elegans Hypothetical pr...    29   6.9  

>Z73103-1|CAA97424.1|  117|Caenorhabditis elegans Hypothetical
           protein C08F8.1 protein.
          Length = 117

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 31/115 (26%), Positives = 53/115 (46%)
 Frame = +3

Query: 159 DLALKQAFVDLQVLMIETKKXIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMA 338
           D  + +AF DLQ    ET+  I   +    V  +    +  T++ +  L    K Y S+ 
Sbjct: 3   DEEISKAFRDLQFKTNETRMRIVQGEQNKKVNYQKMRISESTKKNLVDLDENLKYYRSVG 62

Query: 339 RMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVCLNHTLNESESNIRDLIQQKR 503
           RMF+ +D          +      +I+ +  +K  L   L E+E+N+R+LIQ +R
Sbjct: 63  RMFLLTDKPAEISRHEAEAKQSKEKIEAIEKQKDYLEKGLVEAETNLRELIQSRR 117


>U58735-1|AAC48148.1|  891|Caenorhabditis elegans Hypothetical
           protein F20B4.7 protein.
          Length = 891

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
 Frame = +3

Query: 300 VLPPGTKTYESMARMFVQSDLEHIKQNLRQKTNTLISRIDDLNNRKVC--LNHTLNESES 473
           VL P    YE  A + VQSD      +L    + LI  + +L ++ +    NH+ N    
Sbjct: 206 VLDPAI-AYEISATVTVQSD-----PDLEIDYDNLIQSLKELQDQAIVRPANHSSNRLSE 259

Query: 474 NIRDLIQQKRMKNENQPAAES 536
             R L+ ++R  + N P  +S
Sbjct: 260 ETRKLLNKRRFMDRNDPQFKS 280


>U39849-8|AAA81050.1|  479|Caenorhabditis elegans Hypothetical
           protein C06A8.5 protein.
          Length = 479

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
 Frame = +3

Query: 354 SDLEHIKQNLRQKTNTLISRIDDLNNR------KVCLNHTLNESESNIRDLIQQKRMKN 512
           +D+E +K+ LRQK   L    DDL N+      K+ L     E    +RDL  +   KN
Sbjct: 12  ADVERLKKILRQKDEMLEEMEDDLKNQGKPCSSKLSLEERAQELSEQLRDLHVEMDGKN 70


>Z82270-3|CAB63205.1|  667|Caenorhabditis elegans Hypothetical
           protein F53H2.3 protein.
          Length = 667

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = -3

Query: 736 LFVEQSHVMQIIVAYNCRQFFYVQIIILYYNCIIS 632
           +FV       +++A NC+  F+    IL+++C++S
Sbjct: 33  VFVSVMRHFSLVLAENCKTRFFKAFAILHFSCLLS 67


>Z73427-8|CAA97804.1|  302|Caenorhabditis elegans Hypothetical
           protein F58B3.8 protein.
          Length = 302

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 131 CQENKITGLGTDDNFKDKEPRCFXGGTGT 45
           C ENK T  G   NF+ K P C  G TG+
Sbjct: 151 CDENKATNSGKHCNFQGK-PSCLNGLTGS 178


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,504,932
Number of Sequences: 27780
Number of extensions: 381241
Number of successful extensions: 934
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3485108972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)