Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_E12
         (1324 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0370 + 18139557-18140469,18140561-18140704,18140804-181409...    30   4.7  
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    29   8.2  

>12_02_0370 +
           18139557-18140469,18140561-18140704,18140804-18140956,
           18141032-18141147,18141231-18141398,18142110-18142334,
           18142458-18142577
          Length = 612

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 2/77 (2%)
 Frame = -3

Query: 998 PXFGPPXSXNXXTPPXQTLXXXXPXTXXXXPPXPXX--PXLXGLDSXPIIPPXXXXXXPX 825
           P    P S +  T   +++    P      PP P    P +  + S P  PP      P 
Sbjct: 23  PRHAAPSSPSQPTTTSRSIPVVLPSAPSSKPPPPTQTAPPVPVVISEP--PPPQPQPEPQ 80

Query: 824 PXVXXXXPXXXDRPTPP 774
           P      P   ++P+PP
Sbjct: 81  PAAPSQPPPPQEQPSPP 97


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 19/72 (26%), Positives = 21/72 (29%), Gaps = 1/72 (1%)
 Frame = -3

Query: 1034 PXXPXXXXXXXXPXFGPPXSXNXX-TPPXQTLXXXXPXTXXXXPPXPXXPXLXGLDSXPI 858
            P  P        P   PP       +PP  T     P +    PP P  P   G    P 
Sbjct: 1138 PPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPA 1197

Query: 857  IPPXXXXXXPXP 822
             PP      P P
Sbjct: 1198 PPPLPIQPPPIP 1209


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,547,995
Number of Sequences: 37544
Number of extensions: 128235
Number of successful extensions: 213
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4143716112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)