Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_E12
         (1324 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    33   1.2  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    33   1.2  
AY119485-1|AAM50139.1|  846|Drosophila melanogaster GH07623p pro...    30   8.2  
AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA...    30   8.2  
AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB...    30   8.2  

>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p protein.
          Length = 420

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 23/89 (25%), Positives = 26/89 (29%), Gaps = 3/89 (3%)
 Frame = -3

Query: 1034 PXXPXXXXXXXXPXFGPPXSXNXXTPPXQTLXXXXP--XTXXXXPPXPXXPXLXGLDSXP 861
            P  P        P +GPP +     PP  T     P        PP P  P        P
Sbjct: 130  PPQPTPSAPAPPPSYGPPQTPPPRPPPQPTPSAPAPSYGPPQPQPPAPQPPSPPSPQPGP 189

Query: 860  -IIPPXXXXXXPXPXVXXXXPXXXDRPTP 777
              +PP      P P      P    RP P
Sbjct: 190  EYLPPDQPKPRPTPSRPQPPPPPPPRPQP 218


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
            protein.
          Length = 420

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 23/89 (25%), Positives = 26/89 (29%), Gaps = 3/89 (3%)
 Frame = -3

Query: 1034 PXXPXXXXXXXXPXFGPPXSXNXXTPPXQTLXXXXP--XTXXXXPPXPXXPXLXGLDSXP 861
            P  P        P +GPP +     PP  T     P        PP P  P        P
Sbjct: 130  PPQPTPSAPAPPPSYGPPQTPPPRPPPQPTPSAPAPSYGPPQPQPPAPQPPSPPSPQPGP 189

Query: 860  -IIPPXXXXXXPXPXVXXXXPXXXDRPTP 777
              +PP      P P      P    RP P
Sbjct: 190  EYLPPDQPKPRPTPSRPQPPPPPPPRPQP 218


>AY119485-1|AAM50139.1|  846|Drosophila melanogaster GH07623p protein.
          Length = 846

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 23/88 (26%), Positives = 24/88 (27%), Gaps = 1/88 (1%)
 Frame = -3

Query: 1034 PXXPXXXXXXXXPXFGPPXSXNXXTPPXQTLXXXXPXTXXX-XPPXPXXPXLXGLDSXPI 858
            P  P        P   PP S     PP  T+    P       PP P  P        P 
Sbjct: 107  PPPPAPPGVESPPGPQPPASPRFDPPPPHTIEPPPPPAPPTLVPPPPPAPPTI----KPP 162

Query: 857  IPPXXXXXXPXPXVXXXXPXXXDRPTPP 774
             PP      P P      P     P PP
Sbjct: 163  PPPAPPTVEPPPPPPPAPPTVEPPPPPP 190


>AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA,
            isoform A protein.
          Length = 1109

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 23/88 (26%), Positives = 24/88 (27%), Gaps = 1/88 (1%)
 Frame = -3

Query: 1034 PXXPXXXXXXXXPXFGPPXSXNXXTPPXQTLXXXXPXTXXX-XPPXPXXPXLXGLDSXPI 858
            P  P        P   PP S     PP  T+    P       PP P  P        P 
Sbjct: 370  PPPPAPPGVESPPGPQPPASPRFDPPPPHTIEPPPPPAPPTLVPPPPPAPPTI----KPP 425

Query: 857  IPPXXXXXXPXPXVXXXXPXXXDRPTPP 774
             PP      P P      P     P PP
Sbjct: 426  PPPAPPTVEPPPPPPPAPPTVEPPPPPP 453


>AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB,
            isoform B protein.
          Length = 1150

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 23/88 (26%), Positives = 24/88 (27%), Gaps = 1/88 (1%)
 Frame = -3

Query: 1034 PXXPXXXXXXXXPXFGPPXSXNXXTPPXQTLXXXXPXTXXX-XPPXPXXPXLXGLDSXPI 858
            P  P        P   PP S     PP  T+    P       PP P  P        P 
Sbjct: 370  PPPPAPPGVESPPGPQPPASPRFDPPPPHTIEPPPPPAPPTLVPPPPPAPPTI----KPP 425

Query: 857  IPPXXXXXXPXPXVXXXXPXXXDRPTPP 774
             PP      P P      P     P PP
Sbjct: 426  PPPAPPTVEPPPPPPPAPPTVEPPPPPP 453


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,653,550
Number of Sequences: 53049
Number of extensions: 195461
Number of successful extensions: 298
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 283
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7191706065
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)