Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_E11
         (1270 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC107864-1|AAI07865.1|  385|Homo sapiens ZC3H13 protein protein.       31   8.9  
BC032425-1|AAH32425.1|  469|Homo sapiens ZC3H13 protein protein.       31   8.9  
AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein pr...    31   8.9  
AL831833-1|CAD38544.1|  796|Homo sapiens hypothetical protein pr...    31   8.9  
AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type c...    31   8.9  
AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type c...    31   8.9  
AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type c...    31   8.9  
AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type c...    31   8.9  
AF137396-7|AAG41681.1|  326|Homo sapiens HOR5'Beta7 protein.           31   8.9  

>BC107864-1|AAI07865.1|  385|Homo sapiens ZC3H13 protein protein.
          Length = 385

 Score = 31.1 bits (67), Expect = 8.9
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 259 RCRSXAPSWAVCTNPPFSPTAAPYPVTIVLSPTR*DTTYRH 381
           R R+ +PS+     PP   +A+PYP   + SP R  +  RH
Sbjct: 68  RKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRH 108


>BC032425-1|AAH32425.1|  469|Homo sapiens ZC3H13 protein protein.
          Length = 469

 Score = 31.1 bits (67), Expect = 8.9
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 259 RCRSXAPSWAVCTNPPFSPTAAPYPVTIVLSPTR*DTTYRH 381
           R R+ +PS+     PP   +A+PYP   + SP R  +  RH
Sbjct: 98  RKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRH 138


>AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein
           protein.
          Length = 1564

 Score = 31.1 bits (67), Expect = 8.9
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 259 RCRSXAPSWAVCTNPPFSPTAAPYPVTIVLSPTR*DTTYRH 381
           R R+ +PS+     PP   +A+PYP   + SP R  +  RH
Sbjct: 351 RKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRH 391


>AL831833-1|CAD38544.1|  796|Homo sapiens hypothetical protein
           protein.
          Length = 796

 Score = 31.1 bits (67), Expect = 8.9
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 259 RCRSXAPSWAVCTNPPFSPTAAPYPVTIVLSPTR*DTTYRH 381
           R R+ +PS+     PP   +A+PYP   + SP R  +  RH
Sbjct: 176 RKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRH 216


>AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type
           containing 13 protein.
          Length = 1564

 Score = 31.1 bits (67), Expect = 8.9
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 259 RCRSXAPSWAVCTNPPFSPTAAPYPVTIVLSPTR*DTTYRH 381
           R R+ +PS+     PP   +A+PYP   + SP R  +  RH
Sbjct: 351 RKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRH 391


>AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type
           containing 13 protein.
          Length = 1668

 Score = 31.1 bits (67), Expect = 8.9
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 259 RCRSXAPSWAVCTNPPFSPTAAPYPVTIVLSPTR*DTTYRH 381
           R R+ +PS+     PP   +A+PYP   + SP R  +  RH
Sbjct: 351 RKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRH 391


>AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type
           containing 13 protein.
          Length = 1564

 Score = 31.1 bits (67), Expect = 8.9
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 259 RCRSXAPSWAVCTNPPFSPTAAPYPVTIVLSPTR*DTTYRH 381
           R R+ +PS+     PP   +A+PYP   + SP R  +  RH
Sbjct: 351 RKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRH 391


>AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type
           containing 13 protein.
          Length = 1668

 Score = 31.1 bits (67), Expect = 8.9
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 259 RCRSXAPSWAVCTNPPFSPTAAPYPVTIVLSPTR*DTTYRH 381
           R R+ +PS+     PP   +A+PYP   + SP R  +  RH
Sbjct: 351 RKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRH 391


>AF137396-7|AAG41681.1|  326|Homo sapiens HOR5'Beta7 protein.
          Length = 326

 Score = 31.1 bits (67), Expect = 8.9
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = +3

Query: 156 RSPVPTLPLTGYLSAFLPSGSVALSHS 236
           R PV T+P+   L AF   GSV LSHS
Sbjct: 163 RGPVATIPIVLLLKAFPYCGSVVLSHS 189


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,593,413
Number of Sequences: 237096
Number of extensions: 3080273
Number of successful extensions: 14661
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14658
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18165255900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)