Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_E10
(1308 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 40 0.005
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 36 0.083
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 36 0.083
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 35 0.11
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 35 0.11
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 34 0.19
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 34 0.19
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 34 0.19
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.34
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.34
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.34
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.59
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 32 0.78
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 32 0.78
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 32 0.78
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 32 0.78
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 32 1.0
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 1.0
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 32 1.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.4
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.8
U37429-5|AAA79347.1| 311|Caenorhabditis elegans Hypothetical pr... 31 1.8
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 31 1.8
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 31 1.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.8
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 31 1.8
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 31 2.4
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 31 2.4
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 2.4
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 2.4
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 2.4
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 31 2.4
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 31 2.4
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 30 3.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 3.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 3.1
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 30 4.1
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 30 4.1
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 30 4.1
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 30 4.1
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 30 4.1
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 30 4.1
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 30 4.1
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 30 4.1
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 30 4.1
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 30 4.1
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 30 4.1
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 4.1
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 30 4.1
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z77665-7|CAI46591.1| 360|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 5.5
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 5.5
AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical ... 29 5.5
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 5.5
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 5.5
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 5.5
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 5.5
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 5.5
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 7.2
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 7.2
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 7.2
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 7.2
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 29 9.6
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 9.6
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 9.6
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 9.6
U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helica... 29 9.6
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 29 9.6
AF098985-5|AAC67418.1| 99|Caenorhabditis elegans Hypothetical ... 29 9.6
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 9.6
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 39.5 bits (88), Expect = 0.005
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = -3
Query: 547 PXPPPXXPGXGRXXXPXAPPPPXXGGGPXEAAXXXXGXXXGGGXRGXGXR 398
P PPP P G P PPPP GGP A G G R R
Sbjct: 39 PPPPPPPPCGGGYEAPPPPPPPSYAGGPSYAGPSYAGSYGPGPYRAKSKR 88
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 35.5 bits (78), Expect = 0.083
Identities = 22/57 (38%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Frame = +3
Query: 387 PXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGG--GXGG 551
P P P P P P GPPP GGGG R PG GG G GG
Sbjct: 127 PGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGG----DPRGPPGGMGGPPGHGG 179
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Frame = -3
Query: 568 GXXXXXPPXPPPXXPGX-GRXXXPXAPPPPXXGGGPXEAAXXXXGXXXG-GGXRGXGXRG 395
G PP P G P PPP GGG G G GG G G
Sbjct: 128 GGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHG 187
Query: 394 XXGG 383
GG
Sbjct: 188 GQGG 191
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Frame = +3
Query: 384 PPXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGG--AXGXXXRPXPGXXG-GGXGG 551
PP P PP GPP G GG G P PG G GG GG
Sbjct: 155 PPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGG 213
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 35.5 bits (78), Expect = 0.083
Identities = 22/57 (38%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Frame = +3
Query: 387 PXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGG--GXGG 551
P P P P P P GPPP GGGG R PG GG G GG
Sbjct: 407 PGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGG----DPRGPPGGMGGPPGHGG 459
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/64 (31%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Frame = -3
Query: 568 GXXXXXPPXPPPXXPGX-GRXXXPXAPPPPXXGGGPXEAAXXXXGXXXG-GGXRGXGXRG 395
G PP P G P PPP GGG G G GG G G
Sbjct: 408 GGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHG 467
Query: 394 XXGG 383
GG
Sbjct: 468 GQGG 471
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Frame = +3
Query: 384 PPXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGG--AXGXXXRPXPGXXG-GGXGG 551
PP P PP GPP G GG G P PG G GG GG
Sbjct: 435 PPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGG 493
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 35.1 bits (77), Expect = 0.11
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 5/55 (9%)
Frame = -3
Query: 613 PXPXRXPPXXXXXXXGXXXXXPPXPPP----XXPGXGRXXXPXAPPPPXXG-GGP 464
P P PP PP PPP P G P PPPP G GGP
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGP 663
Score = 28.7 bits (61), Expect = 9.6
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +3
Query: 381 APPXXPRXPXPLXPPPXXXPXXXXAA--SXGPPPXXGGGGAXGXXXRPXPGXXG 536
AP P P PPP P A PPP G GG + P G
Sbjct: 623 APISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPPAQDG 676
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 35.1 bits (77), Expect = 0.11
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 5/55 (9%)
Frame = -3
Query: 613 PXPXRXPPXXXXXXXGXXXXXPPXPPP----XXPGXGRXXXPXAPPPPXXG-GGP 464
P P PP PP PPP P G P PPPP G GGP
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGP 489
Score = 28.7 bits (61), Expect = 9.6
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +3
Query: 381 APPXXPRXPXPLXPPPXXXPXXXXAA--SXGPPPXXGGGGAXGXXXRPXPGXXG 536
AP P P PPP P A PPP G GG + P G
Sbjct: 449 APISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPPAQDG 502
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 34.3 bits (75), Expect = 0.19
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Frame = +3
Query: 384 PPXXPRXPXPLXPP-PXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXG 548
P P P P+ PP P P + GPP G G G R P G G
Sbjct: 254 PQGAPGKPGPIGPPGPKGNPGPDGQSYQGPPGPPGDSGTPGHEGRAGPNGPAGPPG 309
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 34.3 bits (75), Expect = 0.19
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Frame = +3
Query: 384 PPXXPRXPXPLXPP-PXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXG 548
P P P P+ PP P P + GPP G G G R P G G
Sbjct: 254 PQGAPGKPGPIGPPGPKGNPGPDGQSYQGPPGPPGDSGTPGHEGRAGPNGPAGPPG 309
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 34.3 bits (75), Expect = 0.19
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 568 GXXXXXPPXPPPXXPGXGRXXXPXAPPPPXXGGGP 464
G PP PPP P P PPPP GGP
Sbjct: 555 GTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGP 589
Score = 33.5 bits (73), Expect = 0.34
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 550 PPXPPPXXPGXGRXXXPXAPPPPXXGGGP 464
PP PPP P PPPP GG P
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPPPPMLGGPP 590
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = -3
Query: 613 PXPXRXPPXXXXXXXGXXXXXPPXPPPXXPGXGRXXXPXAPPPPXXGGGP 464
P P PP G PP PPP P G P PPPP GP
Sbjct: 559 PIPPPPPPPLPQNLSGA----PPPPPPPPPMLG--GPPPPPPPPGGLMGP 602
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.5 bits (73), Expect = 0.34
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = +3
Query: 384 PPXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXGGXXXX 563
PP P PPP P S GPPP G G P P GG GG
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG--GCPPPPPPPPPGGFKGGPPPP 787
Query: 564 XP 569
P
Sbjct: 788 PP 789
Score = 31.1 bits (67), Expect = 1.8
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 550 PPXPPPXXPGXGRXXXPXAPPPP 482
PP PPP PG G P PPPP
Sbjct: 769 PPPPPPPPPG-GFKGGPPPPPPP 790
Score = 30.7 bits (66), Expect = 2.4
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 547 PXPPPXXPGXGRXXXPXAPPPPXXGGGPXEAAXXXXGXXXGG 422
P PPP G PPPP GG P G GG
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 547 PXPPPXXPGXGRXXXPXAPPPPXXGGGP 464
P PPP PG G P PPP GGP
Sbjct: 758 PPPPPPPPG-GCPPPPPPPPPGGFKGGP 784
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = +3
Query: 384 PPXXPRXPXPL--XPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXP 524
PP P P P+ PPP P + GPPP GG P P
Sbjct: 713 PPPPPGLP-PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Score = 29.5 bits (63), Expect = 5.5
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +3
Query: 384 PPXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPG 527
PP P P+ P P PPP GG G P PG
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 365 PGVPXGAPXXAAGPXPPXSPPXXXP 439
P P G P + GP PP PP P
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 28.7 bits (61), Expect = 9.6
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 550 PPXPPPXXPGXGRXXXPXAPPPPXXGGGP 464
PP PPP PG PPPP GG P
Sbjct: 726 PPPPPP--PGGLPPITGGPPPPPPPGGLP 752
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.5 bits (73), Expect = 0.34
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = +3
Query: 384 PPXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXGGXXXX 563
PP P PPP P S GPPP G G P P GG GG
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG--GCPPPPPPPPPGGFKGGPPPP 787
Query: 564 XP 569
P
Sbjct: 788 PP 789
Score = 31.1 bits (67), Expect = 1.8
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 550 PPXPPPXXPGXGRXXXPXAPPPP 482
PP PPP PG G P PPPP
Sbjct: 769 PPPPPPPPPG-GFKGGPPPPPPP 790
Score = 30.7 bits (66), Expect = 2.4
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 547 PXPPPXXPGXGRXXXPXAPPPPXXGGGPXEAAXXXXGXXXGG 422
P PPP G PPPP GG P G GG
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 547 PXPPPXXPGXGRXXXPXAPPPPXXGGGP 464
P PPP PG G P PPP GGP
Sbjct: 758 PPPPPPPPG-GCPPPPPPPPPGGFKGGP 784
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = +3
Query: 384 PPXXPRXPXPL--XPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXP 524
PP P P P+ PPP P + GPPP GG P P
Sbjct: 713 PPPPPGLP-PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Score = 29.5 bits (63), Expect = 5.5
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +3
Query: 384 PPXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPG 527
PP P P+ P P PPP GG G P PG
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 365 PGVPXGAPXXAAGPXPPXSPPXXXP 439
P P G P + GP PP PP P
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 28.7 bits (61), Expect = 9.6
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 550 PPXPPPXXPGXGRXXXPXAPPPPXXGGGP 464
PP PPP PG PPPP GG P
Sbjct: 726 PPPPPP--PGGLPPITGGPPPPPPPGGLP 752
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.5 bits (73), Expect = 0.34
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = +3
Query: 384 PPXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXGGXXXX 563
PP P PPP P S GPPP G G P P GG GG
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG--GCPPPPPPPPPGGFKGGPPPP 370
Query: 564 XP 569
P
Sbjct: 371 PP 372
Score = 31.1 bits (67), Expect = 1.8
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 550 PPXPPPXXPGXGRXXXPXAPPPP 482
PP PPP PG G P PPPP
Sbjct: 352 PPPPPPPPPG-GFKGGPPPPPPP 373
Score = 30.7 bits (66), Expect = 2.4
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 547 PXPPPXXPGXGRXXXPXAPPPPXXGGGPXEAAXXXXGXXXGG 422
P PPP G PPPP GG P G GG
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 547 PXPPPXXPGXGRXXXPXAPPPPXXGGGP 464
P PPP PG G P PPP GGP
Sbjct: 341 PPPPPPPPG-GCPPPPPPPPPGGFKGGP 367
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = +3
Query: 384 PPXXPRXPXPL--XPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXP 524
PP P P P+ PPP P + GPPP GG P P
Sbjct: 296 PPPPPGLP-PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Score = 29.5 bits (63), Expect = 5.5
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +3
Query: 384 PPXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPG 527
PP P P+ P P PPP GG G P PG
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 365 PGVPXGAPXXAAGPXPPXSPPXXXP 439
P P G P + GP PP PP P
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCP 352
Score = 28.7 bits (61), Expect = 9.6
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -3
Query: 550 PPXPPPXXPGXGRXXXPXAPPPPXXGGGP 464
PP PPP PG PPPP GG P
Sbjct: 309 PPPPPP--PGGLPPITGGPPPPPPPGGLP 335
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.7 bits (71), Expect = 0.59
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -3
Query: 523 GXGRXXXPXAPPPPXXGGGPXEAAXXXXGXXXGGGXRGXGXRGXXG 386
G G P PPPP GGG G GGG G G G G
Sbjct: 104 GCGGGCAPP-PPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGG 148
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = -3
Query: 523 GXGRXXXPXAPPPPXXGG--GPXEAAXXXXGXXXGGGXRGXGXRGXXGG 383
G G P PPP GG G G GGG G G G GG
Sbjct: 47 GCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGG 95
Score = 30.7 bits (66), Expect = 2.4
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +1
Query: 487 GGGRXGXXXGXXXGXXAGXXGXXXXXPPXPXXXXGGXPXGXGXXXGXXXXXGXXRXXXXX 666
GGG G G G G PP P GG G G G G
Sbjct: 86 GGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGG 145
Query: 667 XGXXGG 684
G GG
Sbjct: 146 GGGCGG 151
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +3
Query: 468 PPPXXGGGGAXGXXXRPXPGXXGGGXGGXXXXXPXXXXXXXGGXRXGXG 614
PPP GGG G G GGG GG GG G G
Sbjct: 113 PPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGG 161
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +1
Query: 487 GGGRXGXXXGXXXGXXAGXXGXXXXXPPXPXXXXGGXPXGXGXXXGXXXXXGXXRXXXXX 666
GGG G G G G PP P GG G G G G
Sbjct: 29 GGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGG 88
Query: 667 XGXXGG 684
G GG
Sbjct: 89 GGGCGG 94
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 550 PPXPPPXXPGXGRXXXPXAPPPPXXGGGPXEAAXXXXGXXXGGGXRGXGXRGXXGG 383
PP PPP G GGG G GGG G G G GG
Sbjct: 111 PPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGG 166
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 32.3 bits (70), Expect = 0.78
Identities = 22/60 (36%), Positives = 22/60 (36%), Gaps = 5/60 (8%)
Frame = +3
Query: 384 PPXXPRX---PXPLXPPPXXXPXXXXAASX-GPPPXXGGGGAXGXXX-RPXPGXXGGGXG 548
PP P P P P P P P P GG GA RP PG GGG G
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 32.3 bits (70), Expect = 0.78
Identities = 22/60 (36%), Positives = 22/60 (36%), Gaps = 5/60 (8%)
Frame = +3
Query: 384 PPXXPRX---PXPLXPPPXXXPXXXXAASX-GPPPXXGGGGAXGXXX-RPXPGXXGGGXG 548
PP P P P P P P P P GG GA RP PG GGG G
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 32.3 bits (70), Expect = 0.78
Identities = 22/60 (36%), Positives = 22/60 (36%), Gaps = 5/60 (8%)
Frame = +3
Query: 384 PPXXPRX---PXPLXPPPXXXPXXXXAASX-GPPPXXGGGGAXGXXX-RPXPGXXGGGXG 548
PP P P P P P P P P GG GA RP PG GGG G
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 32.3 bits (70), Expect = 0.78
Identities = 22/60 (36%), Positives = 22/60 (36%), Gaps = 5/60 (8%)
Frame = +3
Query: 384 PPXXPRX---PXPLXPPPXXXPXXXXAASX-GPPPXXGGGGAXGXXX-RPXPGXXGGGXG 548
PP P P P P P P P P GG GA RP PG GGG G
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 31.9 bits (69), Expect = 1.0
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -3
Query: 613 PXPXRXPPXXXXXXXGXXXXXPPXPPPXXPGXGRXXXPXAPPPP 482
P P R P PP PPP P P PPPP
Sbjct: 468 PPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPP 511
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.9 bits (69), Expect = 1.0
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -3
Query: 613 PXPXRXPPXXXXXXXGXXXXXPPXPPPXXPGXGRXXXPXAPPPP 482
P P R P PP PPP P P PPPP
Sbjct: 475 PPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPP 518
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 31.9 bits (69), Expect = 1.0
Identities = 19/63 (30%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Frame = +3
Query: 384 PPXXPRXPX-PLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXGGXXX 560
P P+ P PL PPP GPP G G G P P G G
Sbjct: 121 PGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKGP 180
Query: 561 XXP 569
P
Sbjct: 181 AGP 183
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 384 PPXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXG 536
PP P P PPP P PPP G G P P G
Sbjct: 290 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 340
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = -3
Query: 613 PXPXRXPPXXXXXXXGXXXXXPPXPPPXXPGXGRXXXPXAPPPPXXGGGP 464
P P P G PP PP PG PPPP G P
Sbjct: 279 PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 328
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = -3
Query: 613 PXPXRXPPXXXXXXXGXXXXXPPXPPPXXPGXGRXXXPXAPPP 485
P P PP G PP PP G P PPP
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 384 PPXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXG 536
PP P P PPP P PPP G G P P G
Sbjct: 300 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 350
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = -3
Query: 613 PXPXRXPPXXXXXXXGXXXXXPPXPPPXXPGXGRXXXPXAPPPPXXGGGP 464
P P P G PP PP PG PPPP G P
Sbjct: 289 PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 338
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = -3
Query: 613 PXPXRXPPXXXXXXXGXXXXXPPXPPPXXPGXGRXXXPXAPPP 485
P P PP G PP PP G P PPP
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/63 (28%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Frame = +3
Query: 384 PPXXPRXPX-PLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXGGXXX 560
P P+ P P+ PPP GPP G G G P P G G
Sbjct: 119 PGRPPKEPCEPITPPPCKPCPEGPPGPAGPPGPQGNKGPLGPPGPPGPEGPNGTAGNKGP 178
Query: 561 XXP 569
P
Sbjct: 179 AGP 181
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/57 (28%), Positives = 19/57 (33%)
Frame = -3
Query: 550 PPXPPPXXPGXGRXXXPXAPPPPXXGGGPXEAAXXXXGXXXGGGXRGXGXRGXXGGA 380
PP PPP P + GGG + GGG G G GG+
Sbjct: 306 PPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGGEASSSSGGGYSGGGESSSSGGS 362
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +3
Query: 474 PXXGGGGAXGXXXRPXPGXXGGGXGGXXXXXPXXXXXXXGGXRXGXG 614
P GGGG G G GGG G P GG G G
Sbjct: 23 PSAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGG 69
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/57 (28%), Positives = 17/57 (29%)
Frame = +3
Query: 381 APPXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXGG 551
AP P P P PPP P GGG + GG GG
Sbjct: 297 APAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGGEASSSSGGGYSGG 353
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 483 GGGGAXGXXXRPXPGXXGGGXGGXXXXXPXXXXXXXGGXRXGXG 614
GGG G P P GGG GG GG G G
Sbjct: 63 GGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGG 106
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/57 (28%), Positives = 19/57 (33%)
Frame = -3
Query: 550 PPXPPPXXPGXGRXXXPXAPPPPXXGGGPXEAAXXXXGXXXGGGXRGXGXRGXXGGA 380
PP PPP P + GGG + GGG G G GG+
Sbjct: 306 PPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGGEASSSSGGGYSGGGESSSSGGS 362
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +3
Query: 474 PXXGGGGAXGXXXRPXPGXXGGGXGGXXXXXPXXXXXXXGGXRXGXG 614
P GGGG G G GGG G P GG G G
Sbjct: 23 PSAGGGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGG 69
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/57 (28%), Positives = 17/57 (29%)
Frame = +3
Query: 381 APPXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXGG 551
AP P P P PPP P GGG + GG GG
Sbjct: 297 APAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGGEASSSSGGGYSGG 353
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 483 GGGGAXGXXXRPXPGXXGGGXGGXXXXXPXXXXXXXGGXRXGXG 614
GGG G P P GGG GG GG G G
Sbjct: 63 GGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGG 106
>U37429-5|AAA79347.1| 311|Caenorhabditis elegans Hypothetical
protein F09E5.7 protein.
Length = 311
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +3
Query: 384 PPXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXGG 551
PP PR P P P GP GGG+ G P GG GG
Sbjct: 248 PPGVPRAGNPNIPDLFRGPDHPDLNPLGPLGQPRGGGSHGRPFMRDPNGRFGGNGG 303
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 31.1 bits (67), Expect = 1.8
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 547 PXPPPXXPGXGRXXXPXAPPPPXXGGGP 464
P PPP G G P PPPP G GP
Sbjct: 305 PPPPPHFMGRG-MPPPFMPPPPHFGMGP 331
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 31.1 bits (67), Expect = 1.8
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 547 PXPPPXXPGXGRXXXPXAPPPPXXGGGP 464
P PPP G G P PPPP G GP
Sbjct: 305 PPPPPHFMGRG-MPPPFMPPPPHFGMGP 331
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Frame = -3
Query: 607 PXRXPPXXXXXXXGXXXXXPPX----PPPXXPGXGRXXXPXAPPPPXXGGGP 464
P PP G PP PPP G +PPPP GG P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 289
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Frame = -3
Query: 607 PXRXPPXXXXXXXGXXXXXPPX----PPPXXPGXGRXXXPXAPPPPXXGGGP 464
P PP G PP PPP G +PPPP GG P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 310
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 4/52 (7%)
Frame = -3
Query: 607 PXRXPPXXXXXXXGXXXXXPPX----PPPXXPGXGRXXXPXAPPPPXXGGGP 464
P PP G PP PPP G +PPPP GG P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 295
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/63 (28%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 384 PPXXPRXPX-PLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXGGXXX 560
P P+ P P+ PPP A GPP G G+ G P G G
Sbjct: 134 PGRPPQQPCEPITPPPCKPCPQGPAGPPGPPGPAGDAGSDGSPGAPGSDGQPGAAGDKGP 193
Query: 561 XXP 569
P
Sbjct: 194 AGP 196
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical protein
R07E3.6 protein.
Length = 927
Score = 30.7 bits (66), Expect = 2.4
Identities = 22/66 (33%), Positives = 22/66 (33%), Gaps = 5/66 (7%)
Frame = -3
Query: 568 GXXXXXPPXPPPXXPGXG-----RXXXPXAPPPPXXGGGPXEAAXXXXGXXXGGGXRGXG 404
G PP PPP P AP P GGG G GGG RG G
Sbjct: 840 GLAPVAPPAPPPPPATQATAAPVTAPKPVAPAPSPFGGG----GFGGGGGGFGGGNRGNG 895
Query: 403 XRGXXG 386
G G
Sbjct: 896 FGGGSG 901
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 30.7 bits (66), Expect = 2.4
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Frame = +3
Query: 381 APPXXPRXPXPLXP--PPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXG 548
APP P P P P PP GPP G G G P P G G
Sbjct: 222 APPGPPGPPGPPGPQGPPGPPGKDGQPGKAGPPGLPGDPGEKGSDGLPGPHGGTGPRG 279
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 550 PPXPPPXXPGXGRXXXPXAPPPP 482
PP PPP PG APPPP
Sbjct: 675 PPPPPPPMPGDLSSLLAAAPPPP 697
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 2.4
Identities = 22/71 (30%), Positives = 24/71 (33%), Gaps = 9/71 (12%)
Frame = +3
Query: 384 PPXXPRXPXPLXPPPXXXPXXXXA---ASXGPPPXXGGGGAXGXXXRPXPGXXG------ 536
PP P PPP P A ++ G P GG G G PG G
Sbjct: 368 PPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQ 427
Query: 537 GGXGGXXXXXP 569
GG GG P
Sbjct: 428 GGPGGFGPPPP 438
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 550 PPXPPPXXPGXGRXXXPXAPPPP 482
PP PPP PG APPPP
Sbjct: 675 PPPPPPPMPGDLSSLLAAAPPPP 697
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -3
Query: 550 PPXPPPXXPGXGRXXXPXAPPPPXXGGGPXEAAXXXXGXXXGGGXRGXGXRGXXGGA 380
PP PPP G G P GG G GGG G GGA
Sbjct: 65 PPPPPPAPIGGGAGYAAPFGGPGPVGGASYSQGPQGFGGQVGGGAYQAGPGPIGGGA 121
Score = 29.1 bits (62), Expect = 7.2
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 5/58 (8%)
Frame = +3
Query: 384 PPXXPRXPXPLX-----PPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGG 542
PP P P P+ P P AS P GG G + PG GGG
Sbjct: 63 PPPPPPPPAPIGGGAGYAAPFGGPGPVGGASYSQGPQGFGGQVGGGAYQAGPGPIGGG 120
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -3
Query: 550 PPXPPPXXPGXGRXXXPXAPPPPXXGGGPXEAAXXXXGXXXGGGXRGXGXRGXXGGA 380
PP PPP G G P GG G GGG G GGA
Sbjct: 65 PPPPPPAPIGGGAGYAAPFGGPGPVGGASYSQGPQGFGGQVGGGAYQAGPGPIGGGA 121
Score = 29.1 bits (62), Expect = 7.2
Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 5/58 (8%)
Frame = +3
Query: 384 PPXXPRXPXPLX-----PPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGG 542
PP P P P+ P P AS P GG G + PG GGG
Sbjct: 63 PPPPPPPPAPIGGGAGYAAPFGGPGPVGGASYSQGPQGFGGQVGGGAYQAGPGPIGGG 120
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 30.3 bits (65), Expect = 3.1
Identities = 18/63 (28%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 384 PPXXPRXPX-PLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXGGXXX 560
P P+ P P+ PPP A + GP G GA G P G G
Sbjct: 129 PGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAPGQDGQPGAPGNKGP 188
Query: 561 XXP 569
P
Sbjct: 189 SGP 191
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 3.1
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 384 PPXXPRXPXPLXPPPXXXPXXXXAASXGPP 473
PP PR P P PPP P + PP
Sbjct: 143 PPRVPRTPPPRSPPPRRPPMTPPSPQRRPP 172
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 3.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 550 PPXPPPXXPGXGRXXXPXAPPPP 482
PP PPP P P PPPP
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPP 1362
Score = 29.9 bits (64), Expect = 4.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 550 PPXPPPXXPGXGRXXXPXAPPPP 482
PP PPP P P PPPP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPP 1360
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.9 bits (64), Expect = 4.1
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Frame = +3
Query: 381 APPXXPRXPXPLXPP-PXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXGG 551
A P P P PP P + GPP G GA G P G GG
Sbjct: 222 AAPGPAGPPGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAPGPDGNPGTAGPPGKAGG 279
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +3
Query: 387 PXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXG 536
P P P P PP P A + G P GG G G + PG G
Sbjct: 176 PAGPSGPGPAGPPGPAGP----AGNDGAPGAPGGPGEPGASEQGGPGEPG 221
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
protein R08B4.1a protein.
Length = 1137
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = -3
Query: 547 PXPPPXXPGXGRXXXPXAPPPPXXGGGPXEAAXXXXGXXXGGGXRGXGXRGXXGGA 380
P PP P GGG + G GGG G G G GGA
Sbjct: 764 PPPPSDFIDIPNDPTLGGPTGSSGGGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGA 819
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 29.9 bits (64), Expect = 4.1
Identities = 18/63 (28%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 384 PPXXPRXPX-PLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXGGXXX 560
P P+ P P+ PPP A + GP G GA G P G G
Sbjct: 129 PGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAPGNDGQPGAPGNKGP 188
Query: 561 XXP 569
P
Sbjct: 189 SGP 191
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 29.9 bits (64), Expect = 4.1
Identities = 18/63 (28%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 384 PPXXPRXPX-PLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXGGXXX 560
P P+ P P+ PPP A + GP G GA G P G G
Sbjct: 129 PGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAPGNDGQPGAPGNKGP 188
Query: 561 XXP 569
P
Sbjct: 189 SGP 191
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +3
Query: 387 PXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXG 536
P P P P PP P A + G P GG G G + PG G
Sbjct: 176 PAGPSGPGPAGPPGPAGP----AGNDGAPGAPGGPGEPGASEQGGPGEPG 221
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +3
Query: 387 PXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXG 536
P P P P PP P A + G P GG G G + PG G
Sbjct: 176 PAGPSGPGPAGPPGPAGP----AGNDGAPGAPGGPGEPGASEQGGPGEPG 221
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 29.9 bits (64), Expect = 4.1
Identities = 18/63 (28%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 384 PPXXPRXPX-PLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXGGXXX 560
P P+ P P+ PPP A + GP G GA G P G G
Sbjct: 129 PGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAPGNDGQPGAPGNKGP 188
Query: 561 XXP 569
P
Sbjct: 189 SGP 191
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +3
Query: 387 PXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXG 536
P P P P PP P A + G P GG G G + PG G
Sbjct: 176 PAGPSGPGPAGPPGPAGP----AGNDGAPGAPGGPGEPGASEQGGPGEPG 221
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 29.9 bits (64), Expect = 4.1
Identities = 18/63 (28%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Frame = +3
Query: 384 PPXXPRXPX-PLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXGGXXX 560
P P+ P P+ PPP A + GP G GA G P G G
Sbjct: 129 PGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAPGNDGQPGAPGNKGP 188
Query: 561 XXP 569
P
Sbjct: 189 SGP 191
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 29.9 bits (64), Expect = 4.1
Identities = 19/70 (27%), Positives = 21/70 (30%), Gaps = 4/70 (5%)
Frame = -3
Query: 607 PXRXPPXXXXXXXGXXXXXPPXPPPXXPGX----GRXXXPXAPPPPXXGGGPXEAAXXXX 440
P + PP P P PG G P PPPP G P +
Sbjct: 1281 PLQPPPPPQMTGPPIGIYPGPPAPGNLPGSSRPSGNRKQPLPPPPPMIRGPPPDQMYRDR 1340
Query: 439 GXXXGGGXRG 410
GG RG
Sbjct: 1341 SGGGGGSMRG 1350
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.9 bits (64), Expect = 4.1
Identities = 25/78 (32%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Frame = +3
Query: 387 PXXPRXPXPLXPP-PXXXPXXXXAASXGPPPXXGGGGAXGXXXRP-XPGXXG--GGXGGX 554
P P P PP P AA GPP G G G P PG G GG G
Sbjct: 248 PGGPGPAGPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQDGGPGTD 307
Query: 555 XXXXPXXXXXXXGGXRXG 608
P GG G
Sbjct: 308 AAYCPCPPRTPAGGGGGG 325
Score = 29.9 bits (64), Expect = 4.1
Identities = 22/78 (28%), Positives = 23/78 (29%), Gaps = 3/78 (3%)
Frame = -3
Query: 607 PXRXPPXXXXXXXGXXXXXPPXPPPXXPGXGRXXXPXAPPPPXXGGGPXEAA---XXXXG 437
P P G PP PP G+ P P P GGP A
Sbjct: 257 PGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQDGGPGTDAAYCPCPPR 316
Query: 436 XXXGGGXRGXGXRGXXGG 383
GGG G G GG
Sbjct: 317 TPAGGGGGGDFPAGGGGG 334
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 29.9 bits (64), Expect = 4.1
Identities = 19/70 (27%), Positives = 21/70 (30%), Gaps = 4/70 (5%)
Frame = -3
Query: 607 PXRXPPXXXXXXXGXXXXXPPXPPPXXPGX----GRXXXPXAPPPPXXGGGPXEAAXXXX 440
P + PP P P PG G P PPPP G P +
Sbjct: 1281 PLQPPPPPQMTGPPIGIYPGPPAPGNLPGSSRPSGNRKQPLPPPPPMIRGPPPDQMYRDR 1340
Query: 439 GXXXGGGXRG 410
GG RG
Sbjct: 1341 SGGGGGSMRG 1350
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Frame = +3
Query: 381 APPXXPRXPXPLXPP-PXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXGG 551
A P P P PP P + GPP G GA G P G GG
Sbjct: 223 AGPGPAGPPGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAPGPDGNPGTAGPPGKAGG 280
>Z77665-7|CAI46591.1| 360|Caenorhabditis elegans Hypothetical
protein K02E11.10 protein.
Length = 360
Score = 29.5 bits (63), Expect = 5.5
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +3
Query: 486 GGGAXGXXXRPXPGXXGGGXGGXXXXXPXXXXXXXGGXRXGXG 614
GGG G P P GG GG P GG G G
Sbjct: 95 GGGLGGFGGAPAPAPAFGGLGGGYQAAPALGGGLGGGLGGGPG 137
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 29.5 bits (63), Expect = 5.5
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = +3
Query: 384 PPXXPRXPX-PLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXGG 551
P P+ P PL PPP A GPP G G G P P G GG
Sbjct: 130 PGKPPQSPCEPLTPPP------CPACPPGPPGAPGAPGKPGSEGPPGPPGHDGPNGG 180
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/65 (27%), Positives = 18/65 (27%)
Frame = +3
Query: 420 PPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXGGXXXXXPXXXXXXXGGX 599
PP GP GGGG G G GGG G GG
Sbjct: 766 PPSDFIDIPNDPTLGGPTGSSGGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGG 825
Query: 600 RXGXG 614
G G
Sbjct: 826 NGGGG 830
Score = 29.1 bits (62), Expect = 7.2
Identities = 18/65 (27%), Positives = 19/65 (29%)
Frame = +3
Query: 420 PPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXGGXXXXXPXXXXXXXGGX 599
PPP + G P GGG G G GGG G GG
Sbjct: 765 PPPSDFIDIPNDPTLGGPTGSSGGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGG 824
Query: 600 RXGXG 614
G G
Sbjct: 825 GNGGG 829
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.5 bits (63), Expect = 5.5
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = -3
Query: 607 PXRXPPXXXXXXXGXXXXXPPXPPPXXPGXGRXXXPXAPPPPXXGGG 467
P PP G P PP P G PP P GGG
Sbjct: 31 PPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPPAPACGGG 77
>AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical
protein Y39G8C.4 protein.
Length = 412
Score = 29.5 bits (63), Expect = 5.5
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +3
Query: 387 PXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXG 548
P P P P+ PP GPP GG GA G P P G G
Sbjct: 215 PGPPGPPGPVGPPGDSGERGNIHEG-GPPGIVGGSGAPGVHGIPGPPGAPGLPG 267
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -3
Query: 607 PXRXPPXXXXXXXGXXXXXPPXPPPXXPGXGRXXXPXAPPPP 482
P PP PP PP G G P PPPP
Sbjct: 215 PPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 256
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.5 bits (63), Expect = 5.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 568 GXXXXXPPXPPPXXPGXGRXXXPXAPPPP 482
G PP PPP P P PPPP
Sbjct: 67 GRPTESPPLPPPPLPLSNPPAKPTPPPPP 95
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.5 bits (63), Expect = 5.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 568 GXXXXXPPXPPPXXPGXGRXXXPXAPPPP 482
G PP PPP P P PPPP
Sbjct: 289 GRPTESPPLPPPPLPLSNPPAKPTPPPPP 317
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -3
Query: 607 PXRXPPXXXXXXXGXXXXXPPXPPPXXPGXGRXXXPXAPPPP 482
P PP PP PP G G P PPPP
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -3
Query: 607 PXRXPPXXXXXXXGXXXXXPPXPPPXXPGXGRXXXPXAPPPP 482
P PP PP PP G G P PPPP
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 7.2
Identities = 23/79 (29%), Positives = 25/79 (31%), Gaps = 3/79 (3%)
Frame = +3
Query: 387 PXXPRXPX-PLXPPPXXXPXXXXAASXGPPPXX--GGGGAXGXXXRPXPGXXGGGXGGXX 557
P P+ P P+ PPP P A P GGG G G GG GG
Sbjct: 50 PACPQAPSCPVCPPPQPCPAPPAAYCPQVQPVYVQSGGGGCGGGGCGGGGGGCGGGGGCG 109
Query: 558 XXXPXXXXXXXGGXRXGXG 614
GG G G
Sbjct: 110 GGGGGGCGGGGGGGCGGGG 128
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/63 (26%), Positives = 19/63 (30%), Gaps = 1/63 (1%)
Frame = +3
Query: 384 PPXXPRXPX-PLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXGGXXX 560
P P+ P P+ PPP GPP G G G P G G
Sbjct: 96 PGHPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGGNGNPGSPGQDGQPGAPGNKGP 155
Query: 561 XXP 569
P
Sbjct: 156 SGP 158
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/63 (26%), Positives = 19/63 (30%), Gaps = 1/63 (1%)
Frame = +3
Query: 384 PPXXPRXPX-PLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXGGXXX 560
P P+ P P+ PPP GPP G G G P G G
Sbjct: 129 PGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGGNGNPGSPGQDGQPGAPGNKGP 188
Query: 561 XXP 569
P
Sbjct: 189 SGP 191
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 550 PPXPPPXXPGXGRXXXPXAPPPPXXGG 470
PP PPP P P PPPP GG
Sbjct: 794 PPPPPPLPPISS--GAPPPPPPPPPGG 818
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 550 PPXPPPXXPGXGRXXXPXAPPPPXXGG 470
PP PPP P P PPPP GG
Sbjct: 794 PPPPPPLPPISS--GAPPPPPPPPPGG 818
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 29.1 bits (62), Expect = 7.2
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +3
Query: 387 PXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXG 548
P P PL P P A GPP G GA G +P P G G
Sbjct: 204 PGVPAQSEPLIPGEPGPPGE--AGPQGPPGSPGQPGADGSPGQPGPKGPNGPDG 255
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.1 bits (62), Expect = 7.2
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +3
Query: 465 GPPPXXGGG--GAXGXXXRPXPGXXGGGXGG 551
GPP GGG G G R G GGG GG
Sbjct: 147 GPPGSNGGGDWGGNGGGGRGGGGGRGGGGGG 177
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 29.1 bits (62), Expect = 7.2
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +3
Query: 387 PXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXG 548
P P PL P P A GPP G GA G +P P G G
Sbjct: 204 PGVPAQSEPLIPGEPGPPGE--AGPQGPPGSPGQPGADGSPGQPGPKGPNGPDG 255
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 28.7 bits (61), Expect = 9.6
Identities = 16/56 (28%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = +3
Query: 384 PPXXPRXPX-PLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXG 548
P P+ P P+ PPP GPP G G+ G P G G
Sbjct: 129 PGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGSNGNPGSPGQDGQPGAPG 184
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 381 APPXXPRXPXPLXPPPXXXPXXXXAASXGPPP 476
APP P P P+ PP P PPP
Sbjct: 39 APPPLPCPPPPICPPQFCPPPPMCPPPPPPPP 70
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 568 GXXXXXPPXPPPXXPGXGRXXXPXAPPPP 482
G PP PPP P P PPPP
Sbjct: 149 GATSSAPPPPPPPPPVSVPSSKPTPPPPP 177
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 568 GXXXXXPPXPPPXXPGXGRXXXPXAPPPP 482
G PP PPP P P PPPP
Sbjct: 149 GATSSAPPPPPPPPPVSVPSSKPTPPPPP 177
>U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform b
protein.
Length = 265
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/47 (31%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +3
Query: 411 PLXPP-PXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXG 548
P+ PP P P + GPP G G G R P G G
Sbjct: 199 PIGPPGPKGNPGPDGQSYQGPPGPPGDSGTPGHEGRAGPNGPAGPPG 245
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +3
Query: 387 PXXPRXPXPLXPPPXXXPXXXXAASXGPPPXXGGGGAXGXXXRPXPGXXGGGXGGXXXXX 566
P P P P P P GPP G G G P GGG G
Sbjct: 136 PGNPGRP-PAQPCHPITPPPCRPCPQGPPGAPGSPGPQGNAGAPGQPGHGGGSGAPGPAG 194
Query: 567 P 569
P
Sbjct: 195 P 195
>AF098985-5|AAC67418.1| 99|Caenorhabditis elegans Hypothetical
protein C08G5.5 protein.
Length = 99
Score = 28.7 bits (61), Expect = 9.6
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = -2
Query: 611 PXPXGXPPXXXXGXGGXXXXXPXXPAXXPXXXPXXXPXRPPPA 483
P P G PP P P P P PPPA
Sbjct: 42 PPPSGLPPMVSESYSAPYAQAPPTSTGYPSAPPMPRPSSPPPA 84
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 28.7 bits (61), Expect = 9.6
Identities = 20/66 (30%), Positives = 21/66 (31%), Gaps = 4/66 (6%)
Frame = +3
Query: 384 PPXXPRXPXPLXPP-PXXXPXXXXAASXGPPPXXGGGGAXGXX---XRPXPGXXGGGXGG 551
P P P P+ PP P GPP G GA G P P G GG
Sbjct: 257 PAGPPGPPGPIGPPGQPGAPGSSQPGPQGPPGDPGIDGAPGNPGSPGEPGPPGQPGAGGG 316
Query: 552 XXXXXP 569
P
Sbjct: 317 CDHCPP 322
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,759,103
Number of Sequences: 27780
Number of extensions: 152011
Number of successful extensions: 2583
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2013
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3652743978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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