Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_E08
         (1226 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    32   0.010
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   4.7  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 31.9 bits (69), Expect = 0.010
 Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
 Frame = +2

Query: 659 ELKLEEVIGVGGFGKVYRGYW-----NDEVVAVKAARQDANEDIEVIKESVLQEARLFWV 823
           +L  + VIG G FG V R +      N   VAVK  ++      E I++   +   +  V
Sbjct: 450 KLSFQGVIGEGAFGIVRRAFLDLKEDNKTQVAVKMLKESPTS--EEIRQFTQEINIMKSV 507

Query: 824 LQHENIVSLKGVCLEEPNL---CLVMEYARGGPLNRVL 928
            QH  IVSL G C+ E       LV+EY   G L   L
Sbjct: 508 RQHPYIVSLIG-CVTEGRAEGPLLVVEYCSRGDLQTYL 544


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 11/50 (22%), Positives = 19/50 (38%)
 Frame = -2

Query: 394 RRHHPGRAPIAPLFLSQAPRHSCSLHSPQHITLHTAKQFG*DHRIIPPSL 245
           R+H P R P  P    Q           Q++++    +F    R+  P +
Sbjct: 110 RKHKPNRKPRTPFTTQQLLALEKKFRDKQYLSIAERAEFSSSLRLTEPQV 159


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,783
Number of Sequences: 336
Number of extensions: 4253
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35863589
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)