Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_E07
         (1241 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024756-6|AAK29881.1|  105|Caenorhabditis elegans Glutaredoxin ...    60   2e-09
U40945-3|AAA81721.2|  146|Caenorhabditis elegans Hypothetical pr...    56   4e-08
Z82082-4|CAE45093.1|  210|Caenorhabditis elegans Hypothetical pr...    38   0.015
AC006831-3|ABD63200.1|   96|Caenorhabditis elegans Hypothetical ...    37   0.034
AC006831-2|AAF39994.2|  119|Caenorhabditis elegans Hypothetical ...    37   0.034
U61947-1|AAB03136.3|  667|Caenorhabditis elegans Thioredoxin red...    31   2.2  
U58751-6|AAZ82854.1|  131|Caenorhabditis elegans Hypothetical pr...    31   2.2  
AF148217-1|AAD41826.1|  667|Caenorhabditis elegans thioredoxin r...    31   2.2  
AF101305-3|AAF98595.1|  341|Caenorhabditis elegans Serpentine re...    30   3.0  
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr...    30   3.9  
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p...    30   3.9  
U55855-2|AAA98018.1|  204|Caenorhabditis elegans Proteasome beta...    29   6.8  

>AC024756-6|AAK29881.1|  105|Caenorhabditis elegans Glutaredoxin
           protein 10 protein.
          Length = 105

 Score = 60.5 bits (140), Expect = 2e-09
 Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
 Frame = +3

Query: 249 CPYCKLAKAVFXQVX---QPIKVIELNXRXXGNTIQANLAQLTGFXTVPQVFINGNCVGG 419
           CPYC  A+A    V      ++ IE++ R   N IQ  L  LTG  +VP+VFING   GG
Sbjct: 23  CPYCHKARAALESVNVKPDALQWIEIDERKDCNEIQDYLGSLTGARSVPRVFINGKFFGG 82

Query: 420 GSDVKALYESGKLEPML 470
           G D  A  ++GKL  +L
Sbjct: 83  GDDTAAGAKNGKLAALL 99


>U40945-3|AAA81721.2|  146|Caenorhabditis elegans Hypothetical
           protein F10D7.3 protein.
          Length = 146

 Score = 56.4 bits (130), Expect = 4e-08
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
 Frame = +3

Query: 249 CPYCKLAKAVFXQVX-QPIKVIELNXRXXGNTIQANLAQLTGFXTVPQVFINGNCVGGGS 425
           CP+ K  KA+        +K++EL+       +Q  L + +G  TVPQ+FI+G  VGG  
Sbjct: 54  CPWSKRLKAILANYEIDDMKIVELDRSNQTEEMQEILKKYSGRTTVPQLFISGKFVGGHD 113

Query: 426 DVKALYESGKLEPML 470
           + KA+ E G+L P+L
Sbjct: 114 ETKAIEEKGELRPLL 128


>Z82082-4|CAE45093.1|  210|Caenorhabditis elegans Hypothetical
           protein ZC334.7 protein.
          Length = 210

 Score = 37.9 bits (84), Expect = 0.015
 Identities = 17/43 (39%), Positives = 27/43 (62%)
 Frame = +3

Query: 342 IQANLAQLTGFXTVPQVFINGNCVGGGSDVKALYESGKLEPML 470
           +Q +L ++T   T P VF+ GN +GG SD+  ++ SG+L   L
Sbjct: 160 LQVDLLKVTRQATFPYVFVCGNFIGGSSDLFNMHHSGQLRQAL 202


>AC006831-3|ABD63200.1|   96|Caenorhabditis elegans Hypothetical
           protein ZK121.1b protein.
          Length = 96

 Score = 36.7 bits (81), Expect = 0.034
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
 Frame = +3

Query: 249 CPYCKLAKAVFXQVXQPIKVIELNXRXXGNT-----IQANLAQLTGFXTVPQVFINGNCV 413
           C +C  AK +F  V    K + L+            I   L   T   +VPQ+F+ G  +
Sbjct: 7   CTFCNRAKDLFSDVRVAYKEVNLDTLKASQPDDYLGIVNGLVYTTRQTSVPQIFVCGRFI 66

Query: 414 GGGSDVKALYESGKL 458
           GG +++ AL  SG L
Sbjct: 67  GGYTELDALRNSGHL 81


>AC006831-2|AAF39994.2|  119|Caenorhabditis elegans Hypothetical
           protein ZK121.1a protein.
          Length = 119

 Score = 36.7 bits (81), Expect = 0.034
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
 Frame = +3

Query: 249 CPYCKLAKAVFXQVXQPIKVIELNXRXXGNT-----IQANLAQLTGFXTVPQVFINGNCV 413
           C +C  AK +F  V    K + L+            I   L   T   +VPQ+F+ G  +
Sbjct: 30  CTFCNRAKDLFSDVRVAYKEVNLDTLKASQPDDYLGIVNGLVYTTRQTSVPQIFVCGRFI 89

Query: 414 GGGSDVKALYESGKL 458
           GG +++ AL  SG L
Sbjct: 90  GGYTELDALRNSGHL 104


>U61947-1|AAB03136.3|  667|Caenorhabditis elegans Thioredoxin
           reductase protein 1 protein.
          Length = 667

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +3

Query: 294 QPIKVIELNXRXXGNTIQANLAQLTGFXTVPQVFINGNCVGGGSDVKAL 440
           +P+++ E+         Q  +  LT   + P ++I GN VGG  ++KAL
Sbjct: 111 KPLEIPEIKKLQVSRASQKVIQYLTLHTSWPLMYIKGNAVGGLKELKAL 159


>U58751-6|AAZ82854.1|  131|Caenorhabditis elegans Hypothetical
           protein C07G1.8 protein.
          Length = 131

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +3

Query: 354 LAQLTGFXTVPQVFINGNCVGGGSDVKAL 440
           L  LT   TVPQ+FI G  VGG +++ AL
Sbjct: 76  LMDLTRQRTVPQIFICGKFVGGYTELNAL 104


>AF148217-1|AAD41826.1|  667|Caenorhabditis elegans thioredoxin
           reductase protein.
          Length = 667

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +3

Query: 294 QPIKVIELNXRXXGNTIQANLAQLTGFXTVPQVFINGNCVGGGSDVKAL 440
           +P+++ E+         Q  +  LT   + P ++I GN VGG  ++KAL
Sbjct: 111 KPLEIPEIKKLQVSRASQKVIQYLTLHTSWPLMYIKGNAVGGLKELKAL 159


>AF101305-3|AAF98595.1|  341|Caenorhabditis elegans Serpentine
           receptor, class ab (class a-like) protein 1 protein.
          Length = 341

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +1

Query: 775 YYEWQSILKLTFRQNVRAEIIFFSSYIFIKLCYYVLSKIDKFR 903
           YY W S     +  N+   +I FS  I I    Y+L K +KFR
Sbjct: 171 YYCWMSSTGNRYMLNLPIFVIVFSQLITIPALLYLLRKNEKFR 213


>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein
            ZK945.9 protein.
          Length = 3178

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 820  VRAEIIFFSS-YIFIKLCYYVLSKIDKFRFWYHVKMTDKKRAREKTY 957
            +R  + FF+S YI + L YY     D+  +WY ++M+      +K Y
Sbjct: 2570 IRDMLCFFASLYIMVMLTYYCK---DRHGYWYQLEMSTILNINQKNY 2613


>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
            protein ZK945.9 protein.
          Length = 3178

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 820  VRAEIIFFSS-YIFIKLCYYVLSKIDKFRFWYHVKMTDKKRAREKTY 957
            +R  + FF+S YI + L YY     D+  +WY ++M+      +K Y
Sbjct: 2570 IRDMLCFFASLYIMVMLTYYCK---DRHGYWYQLEMSTILNINQKNY 2613


>U55855-2|AAA98018.1|  204|Caenorhabditis elegans Proteasome beta
           subunit protein 3 protein.
          Length = 204

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = -1

Query: 548 NILYVHQNINLNMQIIIKQLI*NLSYQHRF 459
           N+  + +N N+  Q++  ++I NL+YQHRF
Sbjct: 72  NLYELRENRNIKPQVL-SEMISNLAYQHRF 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,176,343
Number of Sequences: 27780
Number of extensions: 384698
Number of successful extensions: 873
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3443371140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)