Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_E05
(1227 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 62 1e-10
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 46 8e-06
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 42 2e-04
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 31 0.25
SPCC24B10.11c |||THO complex subunit 7 |Schizosaccharomyces pomb... 31 0.33
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 30 0.57
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 30 0.75
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 29 1.00
SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase... 28 2.3
SPBP23A10.05 |ssr4||SWI/SNF and RSC complex subunit Ssr4|Schizos... 28 2.3
SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4 |S... 28 3.0
SPBC13A2.04c |||PTR family peptide transporter|Schizosaccharomyc... 28 3.0
SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce... 27 4.0
SPBC1861.08c |||U2 snRNP-associated protein Lea1 |Schizosaccharo... 27 4.0
SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces p... 27 5.3
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 26 9.3
SPAC26H5.07c |||seven transmembrane receptor-like protein|Schizo... 26 9.3
SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces po... 26 9.3
SPAC16E8.12c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 9.3
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 26 9.3
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 62.5 bits (145), Expect = 1e-10
Identities = 53/226 (23%), Positives = 111/226 (49%), Gaps = 5/226 (2%)
Frame = +2
Query: 383 LKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLT 562
L ++ NL V+ ++ + +++ N +LP ++ +K LD+ N +
Sbjct: 410 LDISRSNLEVIPVKIYPYAHELISLNVSHNLSLDLPLDFMERCVKLKRLDI-SNNLRSPR 468
Query: 563 EEDFRDIQELEHLLVADNQISEIEK---DALPK-GLKHVHLGINKLNTLNGALRDLDDLE 730
+ +++LE L ++ N I E++ L + LK +++ NKL L + R L +L
Sbjct: 469 GKPITALRQLEVLNMSRNDIYELDPLIFSGLSRNSLKELNIANNKLFFLPHSTRYLVNLT 528
Query: 731 WIFINANNLKSIENELPTKAKKMQLIHAAHNELQSLPSDLKLMPSLQSLYFYGNNIKS-L 907
++ ++ NN + + T+ +++ ++ +HN L + S + + L+ LY N++ + L
Sbjct: 529 YLDLSYNNFVTFP-LIITELSQLETLNFSHNLLSQISSKIGSLVKLKHLYLQFNDLSNRL 587
Query: 908 DETLQKSRNLMRIGLSFNKIEFLTKDDFTEAXKLAELNIAXNELKY 1045
+ + +NL I LS+N I + +E KL +N+A N L +
Sbjct: 588 PQEIGLLKNLETIDLSYNAITNIA--SLSECPKLNSINVACNLLSF 631
Score = 40.3 bits (90), Expect = 5e-04
Identities = 63/288 (21%), Positives = 127/288 (44%), Gaps = 38/288 (13%)
Frame = +2
Query: 284 FSTETKIGLDISYSQLPDFAEHSFRELGLSITRLKLNFDNLSVLKESVFTKLDLVDYFSL 463
FS + DIS+++L + L +++ +K+N+++ + + +++ +L Y S
Sbjct: 656 FSYSNLVYFDISHAKLIGLKDSVIETL-VNVETVKVNYNHFTSISDAISAMQNL-KYLSC 713
Query: 464 ADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTEEDFRDIQELEHLLVADNQISEIEKD- 640
+ + + + L L H+ LDL N I K+ E+ + L+ + ++ N + +I+
Sbjct: 714 TNCEMSYVSPN-LGKLKHLVHLDLHANNI-KIFPEEVWQVSSLKVVNLSSNILEKIKLPV 771
Query: 641 ALPKGLKHVHLGINKLNTLNG-ALRDLDDLEWIFINANNLKSIENELPTKA-------KK 796
A K L + + TL+G + L E++ L ++N L K
Sbjct: 772 ATSKKLTRTISQLKIMRTLSGNPVSSLSSQEFVMPTVEELYLVDNRLGNDCFTALEYFKC 831
Query: 797 MQLIHAAHNELQSLPS-------DLK-LMPS----------------LQSLYFYGNNIKS 904
+++++ ++N L +PS DLK L S L++LY GN + S
Sbjct: 832 LKVLNLSYNYLTEIPSKFFQNFSDLKHLFVSGNELANLSISSTAQVLLETLYANGNRLSS 891
Query: 905 LDETLQKSRNLMRIGLSFNKIEFLT-----KDDFTEAXKLAELNIAXN 1033
+ S++L + +S N ++ L K T+ +L LN++ N
Sbjct: 892 FPKNEALSKSLRFLDISTNNLQNLAVEKAEKKSLTKLPQLEYLNLSGN 939
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 46.4 bits (105), Expect = 8e-06
Identities = 41/162 (25%), Positives = 82/162 (50%)
Frame = +2
Query: 500 LQHLPHVKTLDLCRNKITKLTEEDFRDIQELEHLLVADNQISEIEKDALPKGLKHVHLGI 679
+QHL + L C N+I +L+ + ++ LE LL+ +N+I EIE+ + + L + L
Sbjct: 708 IQHLDGLLKLSACNNRIKELSFTN-SNLHRLEELLLGNNEIEEIEEISSLQNLMVLQLDN 766
Query: 680 NKLNTLNGALRDLDDLEWIFINANNLKSIENELPTKAKKMQLIHAAHNELQSLPSDLKLM 859
NKL L A + + L + I+ N + +E + + ++ ++ N + P D++ +
Sbjct: 767 NKLTNLK-ASQPMIHLRILRISNNAIHQLEVD---QFPHLRTLYMDLNRF-NRPPDIRRL 821
Query: 860 PSLQSLYFYGNNIKSLDETLQKSRNLMRIGLSFNKIEFLTKD 985
L + F + ++ + +Q S ++ + LS N F+T D
Sbjct: 822 KRLVNFSFRTQDPEASNFVIQPSLDIRNLYLSNN--TFVTLD 861
Score = 41.1 bits (92), Expect = 3e-04
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = +2
Query: 446 VDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTEEDFRDIQELEHLLVADNQIS 625
V Y LA+ L E+P+++ +P+++ LDL N I+ + E + +Q + L + N+I
Sbjct: 869 VRYLELANVQLKEVPKYIATSMPNLRVLDLSHNYISDI--ESLKPLQMIHRLYLVGNRIK 926
Query: 626 EIEK--DALPKGLKHVHLGINKLNTLN 700
++ D L LK +++ ++N LN
Sbjct: 927 KMRNLCDIL-ANLKQLNVLDLRMNPLN 952
Score = 26.6 bits (56), Expect = 7.0
Identities = 23/84 (27%), Positives = 39/84 (46%)
Frame = +2
Query: 791 KKMQLIHAAHNELQSLPSDLKLMPSLQSLYFYGNNIKSLDETLQKSRNLMRIGLSFNKIE 970
K++ + + L SL +L PS++ L GN I L R+L + N++
Sbjct: 603 KRIIQLDISRRHLDSLIGLSELCPSIEELTLEGNEIAYLTGCPVTIRDLNAVE---NRLS 659
Query: 971 FLTKDDFTEAXKLAELNIAXNELK 1042
LT F+ L L+I+ N+L+
Sbjct: 660 SLT--SFSNLLNLQYLDISYNQLE 681
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 41.5 bits (93), Expect = 2e-04
Identities = 29/113 (25%), Positives = 54/113 (47%)
Frame = +2
Query: 293 ETKIGLDISYSQLPDFAEHSFRELGLSITRLKLNFDNLSVLKESVFTKLDLVDYFSLADN 472
E + LD+S+ L + + I RL L + + + + K + Y ++ N
Sbjct: 27 ENALTLDLSHLNLRELPYEQLERIQGRIARLALGHNFIKSIGPEIL-KFTRLRYLNIRSN 85
Query: 473 SLPELPRHVLQHLPHVKTLDLCRNKITKLTEEDFRDIQELEHLLVADNQISEI 631
L E P + + L ++ LD+ RNKI +L E F + L+ L ++ N++ E+
Sbjct: 86 VLREFPESLCR-LESLEILDISRNKIKQL-PESFGALMNLKVLSISKNRLFEL 136
Score = 41.1 bits (92), Expect = 3e-04
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Frame = +2
Query: 524 TLDLCRNKITKLTEEDFRDIQ-ELEHLLVADNQISEIEKDALP-KGLKHVHLGINKLNTL 697
TLDL + +L E IQ + L + N I I + L L+++++ N L
Sbjct: 31 TLDLSHLNLRELPYEQLERIQGRIARLALGHNFIKSIGPEILKFTRLRYLNIRSNVLREF 90
Query: 698 NGALRDLDDLEWIFINANNLKSIENELPTKAKKMQLIHAAHNELQSLPSDLKLMPSLQSL 877
+L L+ LE + I+ N +K + ++++ + N L LP+ + MP+L+ L
Sbjct: 91 PESLCRLESLEILDISRNKIKQLPESFGA-LMNLKVLSISKNRLFELPTYIAHMPNLEIL 149
Query: 878 YFYGNNI 898
N+I
Sbjct: 150 KIENNHI 156
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 31.5 bits (68), Expect = 0.25
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = +2
Query: 203 DTGTGTVLVVCQRINAYEEIARALTNKFSTETKIGLDISYSQLPDFAEHSFRELG----L 370
DT + V+ AY+ I L FST+TK L I S LP + + +++ +
Sbjct: 1522 DTLSCNVIFSGNERKAYKLIDEKLLQYFSTKTKNSLLIIESSLPHILKANVKQIEELPYI 1581
Query: 371 SITRLKLNFDNLSVLKESVFTKL 439
I RL+ N +LS K+ + TK+
Sbjct: 1582 MIPRLESNIQSLS-WKQHIATKM 1603
>SPCC24B10.11c |||THO complex subunit 7 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 202
Score = 31.1 bits (67), Expect = 0.33
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Frame = +2
Query: 521 KTLDLCRNKITKLTEEDFRDIQELEHLLVADNQISEIEKDALPKGLKHVHLGINKLNTLN 700
KT C + T++++ + +D+ + L Q E+ K + KGL+ + L
Sbjct: 74 KTQTFCEAEKTEISQLE-QDLLVAQEELRKREQYDELAKPIMSKGLRSRTEQQESIGKLQ 132
Query: 701 GALRDLDDLEWIFINANNL-KSIENELPTKAKKMQ-LIHAAHN 823
A+R+L++ ++ A NL K I +E + +Q ++H N
Sbjct: 133 DAIRELEEENANYVKAWNLRKDIFDETLKQMNHLQSILHPPSN 175
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 30.3 bits (65), Expect = 0.57
Identities = 26/103 (25%), Positives = 48/103 (46%)
Frame = +2
Query: 326 QLPDFAEHSFRELGLSITRLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVLQ 505
+L FA+ +L S L + D +S +++ DL++Y LPEL + +
Sbjct: 3684 ELSRFADLLSNKLFPSSIPLYASADKVSSIRDQQKGINDLIEYCRKKRTELPEL-SYCFK 3742
Query: 506 HLPHVKTLDLCRNKITKLTEEDFRDIQELEHLLVADNQISEIE 634
HL +++L LT ++F ++ L + D+ +S IE
Sbjct: 3743 HLVSLQSLKSISRTQVDLTNDEFLNLMNFV-LNLFDSLLSSIE 3784
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 29.9 bits (64), Expect = 0.75
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 740 INANNLKSIENELPTKAKKMQLIHAAHNELQSLPSDLKL 856
I A+NLK EN+ + +K+ + + NE+Q+ DLKL
Sbjct: 291 IVASNLKQAENKTISYEEKLSIAQNSINEIQTQNRDLKL 329
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 29.5 bits (63), Expect = 1.00
Identities = 21/84 (25%), Positives = 43/84 (51%)
Frame = +2
Query: 719 DDLEWIFINANNLKSIENELPTKAKKMQLIHAAHNELQSLPSDLKLMPSLQSLYFYGNNI 898
DD++ + + + ++S+ + + K +Q + N+++ + S + +L L Y N I
Sbjct: 38 DDVDCVELIQSRIQSMASLGLERFKNLQSLCLRQNQIKKIES---VPETLTELDLYDNLI 94
Query: 899 KSLDETLQKSRNLMRIGLSFNKIE 970
+ E L +NL + LSFN I+
Sbjct: 95 VRI-ENLDNVKNLTYLDLSFNNIK 117
>SPBPJ4664.06 |gpt1||UDP-glucose-glycoprotein glucosyltransferase
Gpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1448
Score = 28.3 bits (60), Expect = 2.3
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2
Query: 503 QHLPHVKTLDLCRNKITKLTEEDFRDIQELEHLLVADNQISEIEKDA 643
+ L KT+DLC+N +TK + D R +++ DN+I+ + + A
Sbjct: 1383 ESLKTAKTIDLCQNPLTKEKKLD-RARRQVSEWTSYDNEIASVLQTA 1428
>SPBP23A10.05 |ssr4||SWI/SNF and RSC complex subunit
Ssr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 28.3 bits (60), Expect = 2.3
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = +2
Query: 656 LKHVHLGINKLNTLNGALRDLDDLEWIFINANNLKSIENELPTKAKKMQLIHAAHNELQS 835
+KH L TL +++D++ ++ N+++ + EL K K QL+ + QS
Sbjct: 289 IKHAEWMSQVLLTLQ-SVKDIEPPA-LWQEPNSMEELGKEL--KDNKEQLVKQ-DQKYQS 343
Query: 836 LPSDLKLMPSLQSLYFYGNNIKSLDE--TLQK 925
L DL S+ +L +NIKS +E LQK
Sbjct: 344 LQGDLSYTDSMSNLLKEFSNIKSAEECDVLQK 375
>SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 690
Score = 27.9 bits (59), Expect = 3.0
Identities = 25/96 (26%), Positives = 44/96 (45%)
Frame = +2
Query: 755 LKSIENELPTKAKKMQLIHAAHNELQSLPSDLKLMPSLQSLYFYGNNIKSLDETLQKSRN 934
L+++ +L K + ++ HN L LP ++ + +L L GN+IK++ L
Sbjct: 170 LRNVSTDL-FKFSFLTELYINHNNLTRLPPEIGKLKNLVILDASGNSIKTIPPELGLLTE 228
Query: 935 LMRIGLSFNKIEFLTKDDFTEAXKLAELNIAXNELK 1042
L + L N I + + T +L L I N L+
Sbjct: 229 LREVLLFDNMISVIPAELGT-LFQLKILGIEGNPLQ 263
>SPBC13A2.04c |||PTR family peptide transporter|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 618
Score = 27.9 bits (59), Expect = 3.0
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 290 TETKIGLDIS-YSQLPDFAEHSFRELGLSITRLKLNFDNLSVLKESVFTKLDL 445
T+T + DIS + Q+P + +F E+ SIT L+ F +S+ T L L
Sbjct: 465 TDTCVSNDISVWIQIPAYVLIAFSEIFASITGLEFAFTKAPPSMKSIITALFL 517
>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2310
Score = 27.5 bits (58), Expect = 4.0
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +2
Query: 197 REDTGTGTVLVVCQRINAYEEIARALTNKFSTETKIGLDISYSQLPDFAEHSFRELGLSI 376
+ED +VVC IN +E A + + +T ++S+ F+ LS
Sbjct: 1722 KEDANAKKWIVVCIDINDEKEAREAAMHAVNLKTNFLANMSHELRTPFSSFYGMLSLLSD 1781
Query: 377 TRL-KLNFDNLSVLKESVFTKLDLVD 451
T+L + +D +S K+S + + ++D
Sbjct: 1782 TKLNEEQYDIVSTAKQSCTSLVQIID 1807
>SPBC1861.08c |||U2 snRNP-associated protein Lea1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 239
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/68 (20%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 428 FTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTEED-FRDIQELEHLL 604
F ++ + +N + + + + LP++KTL L +N + ++ + D +L +L
Sbjct: 59 FPRMKRLQTLLCGNNRITAIAPDIGKVLPNLKTLSLAQNHLQEIADLDPLASCPQLTNLS 118
Query: 605 VADNQISE 628
DN +++
Sbjct: 119 CIDNPVAQ 126
>SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1033
Score = 27.1 bits (57), Expect = 5.3
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +2
Query: 797 MQLIHAAHNELQSLPSDLKLMPSLQSLYFYGNNIKSLDETLQKSRNLMRIGLSFNKIEFL 976
++ + + N L + L+P L LYF G S+ + + L+ +GL + I+ L
Sbjct: 824 LKRLESYSNNLLDYHVIVDLLPKLAHLYFSGKFPDSVKLSPVQQSVLLALGLQYKTIDTL 883
Query: 977 TKD 985
K+
Sbjct: 884 EKE 886
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 26.2 bits (55), Expect = 9.3
Identities = 23/101 (22%), Positives = 42/101 (41%)
Frame = +2
Query: 200 EDTGTGTVLVVCQRINAYEEIARALTNKFSTETKIGLDISYSQLPDFAEHSFRELGLSIT 379
+DT G +V Y ++ARA+ NK + + L + + LP S+
Sbjct: 835 DDTNNGVFDLVLTTHTNYTDMARAVANKLNVDPNY-LQFTMAHLPSRTPR-------SVI 886
Query: 380 RLKLNFDNLSVLKESVFTKLDLVDYFSLADNSLPELPRHVL 502
R F + + + ++V ++ + D +L EL R L
Sbjct: 887 RNPSKFTLQNAIPSTYSHNQNVVMFYEVLDITLSELERKQL 927
>SPAC26H5.07c |||seven transmembrane receptor-like
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 505
Score = 26.2 bits (55), Expect = 9.3
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 710 RDLDDLEWIFINANNLKSIENELPTKAKKMQLIHAAHNELQSL 838
+D+D+ E +N+ + +E PT +IH + +E Q+L
Sbjct: 441 QDVDEFEMTSSLSNDSLHLHHERPTSPANPHIIHGSADEHQAL 483
>SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 467
Score = 26.2 bits (55), Expect = 9.3
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +2
Query: 740 INANNLKSIENELPTKAKKMQLIHAAHNELQS--LPSDLKLMPSLQSLYFYGNN-IKSLD 910
INA ++ S+EN+ TK + H NE P+ L L+ + L + + I SL
Sbjct: 363 INAPSVLSMENDFSTKKMSSNIGHVFQNETVKYVFPTPLYLVSDILQLATHNRSFICSLP 422
Query: 911 ETLQKSRN 934
L++ N
Sbjct: 423 HFLRRWSN 430
>SPAC16E8.12c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 170
Score = 26.2 bits (55), Expect = 9.3
Identities = 11/48 (22%), Positives = 22/48 (45%)
Frame = +2
Query: 875 LYFYGNNIKSLDETLQKSRNLMRIGLSFNKIEFLTKDDFTEAXKLAEL 1018
+Y Y + S+D+ L + ++ R L + L K D + K + +
Sbjct: 1 MYVYSQALSSIDDLLNRDTSVERRNLVARNLSLLLKSDDVQTRKKSHI 48
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 26.2 bits (55), Expect = 9.3
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = +2
Query: 425 VFTKLDLVDYFSLADNSLPELPRHVLQHLPHVKTLDLCRNKITKLTEEDFRDIQELEHLL 604
+F K D NSL +LP + +P + LC K+ L + +D+ EL ++
Sbjct: 422 LFRKGDFSQAIEEFTNSLSQLPAKHTKRVPLLSNRSLCYQKVGDL-KTCLQDVDELVDII 480
Query: 605 VADNQISEIEKD 640
+ E +D
Sbjct: 481 GEEKGHGESIRD 492
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,097,035
Number of Sequences: 5004
Number of extensions: 81537
Number of successful extensions: 243
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 665388788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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