Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_E04
         (1246 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC080531-1|AAH80531.1|   64|Homo sapiens coiled-coil domain cont...    33   2.8  
AY794023-1|AAV40981.1|   64|Homo sapiens HSPC016 protein protein.      33   2.8  
AY508979-1|AAR87665.1|   64|Homo sapiens unknown protein protein.      33   2.8  

>BC080531-1|AAH80531.1|   64|Homo sapiens coiled-coil domain
           containing 72 protein.
          Length = 64

 Score = 32.7 bits (71), Expect = 2.8
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +3

Query: 195 KRNPCKAPKKESKEMDEDD 251
           K+ P K PKK++KEMDE+D
Sbjct: 8   KKKPLKQPKKQAKEMDEED 26


>AY794023-1|AAV40981.1|   64|Homo sapiens HSPC016 protein protein.
          Length = 64

 Score = 32.7 bits (71), Expect = 2.8
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +3

Query: 195 KRNPCKAPKKESKEMDEDD 251
           K+ P K PKK++KEMDE+D
Sbjct: 8   KKKPLKQPKKQAKEMDEED 26


>AY508979-1|AAR87665.1|   64|Homo sapiens unknown protein protein.
          Length = 64

 Score = 32.7 bits (71), Expect = 2.8
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +3

Query: 195 KRNPCKAPKKESKEMDEDD 251
           K+ P K PKK++KEMDE+D
Sbjct: 8   KKKPLKQPKKQAKEMDEED 26


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,256,692
Number of Sequences: 237096
Number of extensions: 1988785
Number of successful extensions: 2692
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2670
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17724886060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)