Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_E04
         (1246 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011542-1|AAS15678.1|   64|Drosophila melanogaster LP11709p pro...    35   0.20 
AL031581-3|CAB41345.1|   64|Drosophila melanogaster EG:115C2.12 ...    35   0.20 
AE014298-70|AAF45528.1|   64|Drosophila melanogaster CG13364-PA ...    35   0.20 
AY061259-1|AAL28807.1|  124|Drosophila melanogaster LD19086p pro...    29   10.0 

>BT011542-1|AAS15678.1|   64|Drosophila melanogaster LP11709p
           protein.
          Length = 64

 Score = 35.1 bits (77), Expect = 0.20
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = +3

Query: 195 KRNPCKAPKKESKEMDEDD 251
           K+ P KAPKK+SK++DEDD
Sbjct: 8   KKKPLKAPKKDSKDLDEDD 26



 Score = 29.5 bits (63), Expect = 10.0
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2

Query: 173 MSGREGGKKKPL 208
           MSGREGGKKKPL
Sbjct: 1   MSGREGGKKKPL 12


>AL031581-3|CAB41345.1|   64|Drosophila melanogaster EG:115C2.12
           protein.
          Length = 64

 Score = 35.1 bits (77), Expect = 0.20
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = +3

Query: 195 KRNPCKAPKKESKEMDEDD 251
           K+ P KAPKK+SK++DEDD
Sbjct: 8   KKKPLKAPKKDSKDLDEDD 26



 Score = 29.5 bits (63), Expect = 10.0
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2

Query: 173 MSGREGGKKKPL 208
           MSGREGGKKKPL
Sbjct: 1   MSGREGGKKKPL 12


>AE014298-70|AAF45528.1|   64|Drosophila melanogaster CG13364-PA
           protein.
          Length = 64

 Score = 35.1 bits (77), Expect = 0.20
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = +3

Query: 195 KRNPCKAPKKESKEMDEDD 251
           K+ P KAPKK+SK++DEDD
Sbjct: 8   KKKPLKAPKKDSKDLDEDD 26



 Score = 29.5 bits (63), Expect = 10.0
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2

Query: 173 MSGREGGKKKPL 208
           MSGREGGKKKPL
Sbjct: 1   MSGREGGKKKPL 12


>AY061259-1|AAL28807.1|  124|Drosophila melanogaster LD19086p
           protein.
          Length = 124

 Score = 29.5 bits (63), Expect = 10.0
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 145 KLISVSAYNHVWP*RWQKETPVKHPRRSPRRWMKTI*P 258
           +++ V     +W  R+QK  PV+H R+SP    K   P
Sbjct: 7   RMLPVPRRRPLWHPRFQKNLPVRHQRKSPPALKKAAVP 44


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,863,100
Number of Sequences: 53049
Number of extensions: 527792
Number of successful extensions: 918
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6662005335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)