Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_E02
(1195 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023828-14|CAA19458.1| 269|Caenorhabditis elegans Hypothetical... 186 4e-47
AL132860-27|CAB60521.1| 365|Caenorhabditis elegans Hypothetical... 73 4e-13
AC006620-4|AAF39778.1| 305|Caenorhabditis elegans Hypothetical ... 73 4e-13
AF016430-4|AAB65372.1| 594|Caenorhabditis elegans Hypothetical ... 70 3e-12
U39850-9|AAM45371.1| 440|Caenorhabditis elegans Polyq (poly glu... 62 6e-10
U39850-8|AAM45369.1| 558|Caenorhabditis elegans Polyq (poly glu... 62 6e-10
U39850-7|AAM45370.1| 573|Caenorhabditis elegans Polyq (poly glu... 62 6e-10
U39850-5|AAM45368.1| 670|Caenorhabditis elegans Polyq (poly glu... 62 6e-10
U39850-4|ABB51184.1| 672|Caenorhabditis elegans Polyq (poly glu... 62 6e-10
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 62 6e-10
U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical pr... 62 1e-09
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81568-2|CAB04590.1| 276|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z81594-6|CAJ85771.1| 153|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z81594-5|CAJ85770.1| 262|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z81594-4|CAB04747.1| 282|Caenorhabditis elegans Hypothetical pr... 30 3.7
U64844-11|AAB18311.1| 482|Caenorhabditis elegans Hypothetical p... 30 3.7
Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 29 8.6
Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 29 8.6
Z36238-8|CAH04738.1| 448|Caenorhabditis elegans Hypothetical pr... 29 8.6
Z36238-7|CAA85278.2| 506|Caenorhabditis elegans Hypothetical pr... 29 8.6
>AL023828-14|CAA19458.1| 269|Caenorhabditis elegans Hypothetical
protein Y17G7B.12 protein.
Length = 269
Score = 186 bits (452), Expect = 4e-47
Identities = 101/234 (43%), Positives = 144/234 (61%), Gaps = 4/234 (1%)
Frame = +2
Query: 305 KXEKQAPKEQYTGKFRR--NRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHED-DIAL 475
K EK+A E F + +K +QK+N+ + Q E L + H D + +
Sbjct: 38 KAEKEANPEGSDDGFTKVQTKKQKQKMNRKRRAQ------EALAAASEVKRVHHDIPVVI 91
Query: 476 NDRKQAKNKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYR 655
D + + ++TK IA+DCE VG G G +LAR+S+VN+ G +YDKFVKP E+V D+R
Sbjct: 92 EDSE--RGELTKVIAIDCEYVGAGMGGTTDILARISIVNELGKIVYDKFVKPTEKVTDFR 149
Query: 656 TIVSGIRKEDLINGEDFSIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKY 835
T VSGIR E++I F Q EV+ +I G+I++GH++ ND VL L+H ++ RDT+K
Sbjct: 150 TAVSGIRPENMIKAIPFDRAQTEVSKLIDGRIVIGHAVHNDFRVLKLNHIRKLTRDTAKC 209
Query: 836 KPFKKITK-GSTPSLKRLAKEILSIDIQHGEHSSVEDARAAMQLYRTVSKKWEA 994
K + TPSLK+LAKE+L I+IQ GEH S+ DAR A++LY V K+WEA
Sbjct: 210 TILKNMANHHGTPSLKKLAKEVLGIEIQRGEHDSITDARVALRLYEAVKKQWEA 263
>AL132860-27|CAB60521.1| 365|Caenorhabditis elegans Hypothetical
protein Y56A3A.33 protein.
Length = 365
Score = 72.9 bits (171), Expect = 4e-13
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 5/164 (3%)
Frame = +2
Query: 497 NKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIR 676
++ K A+DCE+V + N +ARVSLV+ G + D F P EV + + SG+
Sbjct: 176 HRSNKVFALDCELV---HTLNGLEVARVSLVDMKGKVLLDTFALPVFEVISFNSTFSGVT 232
Query: 677 KEDLINGEDFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKKI 853
++D+ + + ++ +I + +LVGHSL++DL L L H N+ DT+
Sbjct: 233 EKDMESAISLEACRLQLFQLINSETLLVGHSLESDLKALRLVH--HNVIDTAVLFSIVDP 290
Query: 854 TKG--STPSLKRLAKEILSIDIQH--GEHSSVEDARAAMQLYRT 973
++ SL+ LAK+ L D+Q HSS+ED+ M+L T
Sbjct: 291 SRSYILKLSLQNLAKKYLCKDVQSEASGHSSIEDSHTCMELLAT 334
>AC006620-4|AAF39778.1| 305|Caenorhabditis elegans Hypothetical
protein C51G7.1 protein.
Length = 305
Score = 72.9 bits (171), Expect = 4e-13
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 5/164 (3%)
Frame = +2
Query: 497 NKITKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIR 676
++ K A+DCE+V + N +ARVSLV+ G + D F P EV + + SG+
Sbjct: 139 HRSNKVFALDCELV---HTLNGLEVARVSLVDMKGKVLLDTFALPVFEVISFNSTFSGVT 195
Query: 677 KEDLINGEDFSIVQKEVADVIRGK-ILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKKI 853
++D+ + + ++ +I + +LVGHSL++DL L L H N+ DT+
Sbjct: 196 EKDMESAISLEACRLQLFQLINSETLLVGHSLESDLKALRLVH--HNVIDTAVLFSIVDP 253
Query: 854 TKG--STPSLKRLAKEILSIDIQH--GEHSSVEDARAAMQLYRT 973
++ SL+ LAK+ L D+Q HSS+ED+ M+L T
Sbjct: 254 SRSYILKLSLQNLAKKYLCKDVQSEASGHSSIEDSHTCMELLAT 297
>AF016430-4|AAB65372.1| 594|Caenorhabditis elegans Hypothetical
protein C05C8.5 protein.
Length = 594
Score = 70.1 bits (164), Expect = 3e-12
Identities = 58/167 (34%), Positives = 83/167 (49%), Gaps = 7/167 (4%)
Frame = +2
Query: 485 KQAKNKITK---FIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYR 655
KQ KI+ ++DCEM D + L R+S+V++F + I D VKP + DY
Sbjct: 209 KQGYKKISASSPMFSVDCEMCET--DVANRELTRISIVDEFENTILDTLVKPEGRITDYV 266
Query: 656 TIVSGIRKEDLINGEDFSI--VQKEVADVI-RGKILVGHSLKNDLNVLFLSHPKRNIRDT 826
T SGI D++ G ++ VQK + ++ ILVGHSL++DL + ++HP D
Sbjct: 267 TRWSGI-TPDMMEGVTTTLGDVQKAIQSLLPPDAILVGHSLEHDLQAMKMTHP--FCLDV 323
Query: 827 SKYKPFKKITKGSTPSLKRLAKEILSIDIQ-HGEHSSVEDARAAMQL 964
+ SLK L + L IQ H S EDA AAM+L
Sbjct: 324 GHVLNYTNSNTEFRNSLKNLTELFLGAQIQSEFGHCSYEDAWAAMRL 370
>U39850-9|AAM45371.1| 440|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform f
protein.
Length = 440
Score = 62.5 bits (145), Expect = 6e-10
Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 7/160 (4%)
Frame = +2
Query: 506 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKED 685
T+ A+DCEMV Y LAR+++V+ + + D FVKP +V D T SG+ E
Sbjct: 269 TRVYALDCEMV---YTIAGPALARLTMVDMQRNRVLDVFVKPPTDVLDPNTEFSGLTMEQ 325
Query: 686 LINGEDF--SIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKKITK 859
+ + D + QK V IL+GHSL++DL + + H +N+ DT+ F+ T+
Sbjct: 326 INSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRVVH--KNVIDTAIL--FRS-TR 380
Query: 860 GSTPSLKRLAKEILSIDIQHGE-----HSSVEDARAAMQL 964
+ +LK L+ ++L +IQ H S+EDA + L
Sbjct: 381 DTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDL 420
>U39850-8|AAM45369.1| 558|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform d
protein.
Length = 558
Score = 62.5 bits (145), Expect = 6e-10
Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 7/160 (4%)
Frame = +2
Query: 506 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKED 685
T+ A+DCEMV Y LAR+++V+ + + D FVKP +V D T SG+ E
Sbjct: 387 TRVYALDCEMV---YTIAGPALARLTMVDMQRNRVLDVFVKPPTDVLDPNTEFSGLTMEQ 443
Query: 686 LINGEDF--SIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKKITK 859
+ + D + QK V IL+GHSL++DL + + H +N+ DT+ F+ T+
Sbjct: 444 INSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRVVH--KNVIDTAIL--FRS-TR 498
Query: 860 GSTPSLKRLAKEILSIDIQHGE-----HSSVEDARAAMQL 964
+ +LK L+ ++L +IQ H S+EDA + L
Sbjct: 499 DTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDL 538
>U39850-7|AAM45370.1| 573|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform e
protein.
Length = 573
Score = 62.5 bits (145), Expect = 6e-10
Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 7/160 (4%)
Frame = +2
Query: 506 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKED 685
T+ A+DCEMV Y LAR+++V+ + + D FVKP +V D T SG+ E
Sbjct: 402 TRVYALDCEMV---YTIAGPALARLTMVDMQRNRVLDVFVKPPTDVLDPNTEFSGLTMEQ 458
Query: 686 LINGEDF--SIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKKITK 859
+ + D + QK V IL+GHSL++DL + + H +N+ DT+ F+ T+
Sbjct: 459 INSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRVVH--KNVIDTAIL--FRS-TR 513
Query: 860 GSTPSLKRLAKEILSIDIQHGE-----HSSVEDARAAMQL 964
+ +LK L+ ++L +IQ H S+EDA + L
Sbjct: 514 DTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDL 553
>U39850-5|AAM45368.1| 670|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform c
protein.
Length = 670
Score = 62.5 bits (145), Expect = 6e-10
Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 7/160 (4%)
Frame = +2
Query: 506 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKED 685
T+ A+DCEMV Y LAR+++V+ + + D FVKP +V D T SG+ E
Sbjct: 499 TRVYALDCEMV---YTIAGPALARLTMVDMQRNRVLDVFVKPPTDVLDPNTEFSGLTMEQ 555
Query: 686 LINGEDF--SIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKKITK 859
+ + D + QK V IL+GHSL++DL + + H +N+ DT+ F+ T+
Sbjct: 556 INSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRVVH--KNVIDTAIL--FRS-TR 610
Query: 860 GSTPSLKRLAKEILSIDIQHGE-----HSSVEDARAAMQL 964
+ +LK L+ ++L +IQ H S+EDA + L
Sbjct: 611 DTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDL 650
>U39850-4|ABB51184.1| 672|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform g
protein.
Length = 672
Score = 62.5 bits (145), Expect = 6e-10
Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 7/160 (4%)
Frame = +2
Query: 506 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKED 685
T+ A+DCEMV Y LAR+++V+ + + D FVKP +V D T SG+ E
Sbjct: 501 TRVYALDCEMV---YTIAGPALARLTMVDMQRNRVLDVFVKPPTDVLDPNTEFSGLTMEQ 557
Query: 686 LINGEDF--SIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKKITK 859
+ + D + QK V IL+GHSL++DL + + H +N+ DT+ F+ T+
Sbjct: 558 INSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRVVH--KNVIDTAIL--FRS-TR 612
Query: 860 GSTPSLKRLAKEILSIDIQHGE-----HSSVEDARAAMQL 964
+ +LK L+ ++L +IQ H S+EDA + L
Sbjct: 613 DTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDL 652
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 62.5 bits (145), Expect = 6e-10
Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 7/160 (4%)
Frame = +2
Query: 506 TKFIAMDCEMVGIGYDGNDHMLARVSLVNKFGDCIYDKFVKPREEVKDYRTIVSGIRKED 685
T+ A+DCEMV Y LAR+++V+ + + D FVKP +V D T SG+ E
Sbjct: 1476 TRVYALDCEMV---YTIAGPALARLTMVDMQRNRVLDVFVKPPTDVLDPNTEFSGLTMEQ 1532
Query: 686 LINGEDF--SIVQKEVADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKKITK 859
+ + D + QK V IL+GHSL++DL + + H +N+ DT+ F+ T+
Sbjct: 1533 INSAPDTLKTCHQKLFKYVNADTILIGHSLESDLKAMRVVH--KNVIDTAIL--FRS-TR 1587
Query: 860 GSTPSLKRLAKEILSIDIQHGE-----HSSVEDARAAMQL 964
+ +LK L+ ++L +IQ H S+EDA + L
Sbjct: 1588 DTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDL 1627
>U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical protein
F31E3.4 protein.
Length = 1131
Score = 61.7 bits (143), Expect = 1e-09
Identities = 55/154 (35%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Frame = +2
Query: 569 LARVSLVNKFGD-CIYDKFVKPREEVK--DYRTIVSGIRKEDLI--NGEDFSIVQKEV-- 727
+ R S V+ G+ I+D VK ++V+ DY T SGI K DL E + K +
Sbjct: 935 VGRASCVDSTGERIIFDDHVKLTDDVEVVDYLTKFSGIVKADLCPTTSEKYLTTHKRLLL 994
Query: 728 ---ADVIRGKILVGHSLKNDLNVLFLSHPKRNIRDTSKYKPFKKITKGSTPSLKRLAKEI 898
+ RG VGH+L ND VL + + I DT ++ SL+ L KEI
Sbjct: 995 RMHVLIQRGVTFVGHALHNDFTVLNVHVAESQIIDTVT---LMRLGTQRMLSLQFLVKEI 1051
Query: 899 LSIDIQHGEHSSVEDARAAMQLYRTVSKKWEAGL 1000
L IQ H SV DAR A++LYR + E GL
Sbjct: 1052 LGETIQMEAHDSVVDARYALKLYRKYLEIKEQGL 1085
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical
protein W06A7.3f protein.
Length = 2488
Score = 31.5 bits (68), Expect = 1.2
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = +2
Query: 365 TEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKITKFIAMDCEMVGI 544
T+ + KSK+ P +N P +G ED+ + + N T I D E +
Sbjct: 683 TDDNVKKSKENTPKAENDTEINYLPGGEEGPEDNAEKRNEAVSPNDETSEIKQDLENLEN 742
Query: 545 GYDGNDH 565
G G D+
Sbjct: 743 GASGPDN 749
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical
protein W06A7.3c protein.
Length = 2484
Score = 31.5 bits (68), Expect = 1.2
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = +2
Query: 365 TEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKITKFIAMDCEMVGI 544
T+ + KSK+ P +N P +G ED+ + + N T I D E +
Sbjct: 683 TDDNVKKSKENTPKAENDTEINYLPGGEEGPEDNAEKRNEAVSPNDETSEIKQDLENLEN 742
Query: 545 GYDGNDH 565
G G D+
Sbjct: 743 GASGPDN 749
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical
protein W06A7.3a protein.
Length = 2607
Score = 31.5 bits (68), Expect = 1.2
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = +2
Query: 365 TEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALNDRKQAKNKITKFIAMDCEMVGI 544
T+ + KSK+ P +N P +G ED+ + + N T I D E +
Sbjct: 683 TDDNVKKSKENTPKAENDTEINYLPGGEEGPEDNAEKRNEAVSPNDETSEIKQDLENLEN 742
Query: 545 GYDGNDH 565
G G D+
Sbjct: 743 GASGPDN 749
>Z81568-2|CAB04590.1| 276|Caenorhabditis elegans Hypothetical
protein K08E3.2 protein.
Length = 276
Score = 30.3 bits (65), Expect = 2.8
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = +2
Query: 299 DHKXEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDDIALN 478
D K E K+ K +K E K NK+KD + +K E + E D+ + + + +
Sbjct: 99 DKKDEDHEKKKTAEEKENNEKKDENK-NKNKDERKDEKKDEKKDDEKDERNDEKKEEKKD 157
Query: 479 DRKQAKNKITKFIAMD 526
D+K K K I++D
Sbjct: 158 DQKDDK-KAKSMISVD 172
>Z81594-6|CAJ85771.1| 153|Caenorhabditis elegans Hypothetical
protein T20F10.2c protein.
Length = 153
Score = 29.9 bits (64), Expect = 3.7
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +2
Query: 269 QKLLASNLLMDHKXEKQAPKEQYTGKFRRN-RKTEQKINKSKDLQPTVRKFETLNLEPDQ 445
+++ + + H E+ KE + TE + K + P + + E + EPD
Sbjct: 83 KEVTVTTVTTQHSREEAQVKEDNQAQSTTTVTSTESPVGKLDEKNPEIEEPEPIVAEPDA 142
Query: 446 ADGHEDD 466
DG E D
Sbjct: 143 VDGDEQD 149
>Z81594-5|CAJ85770.1| 262|Caenorhabditis elegans Hypothetical
protein T20F10.2b protein.
Length = 262
Score = 29.9 bits (64), Expect = 3.7
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +2
Query: 269 QKLLASNLLMDHKXEKQAPKEQYTGKFRRN-RKTEQKINKSKDLQPTVRKFETLNLEPDQ 445
+++ + + H E+ KE + TE + K + P + + E + EPD
Sbjct: 192 KEVTVTTVTTQHSREEAQVKEDNQAQSTTTVTSTESPVGKLDEKNPEIEEPEPIVAEPDA 251
Query: 446 ADGHEDD 466
DG E D
Sbjct: 252 VDGDEQD 258
>Z81594-4|CAB04747.1| 282|Caenorhabditis elegans Hypothetical
protein T20F10.2a protein.
Length = 282
Score = 29.9 bits (64), Expect = 3.7
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +2
Query: 269 QKLLASNLLMDHKXEKQAPKEQYTGKFRRN-RKTEQKINKSKDLQPTVRKFETLNLEPDQ 445
+++ + + H E+ KE + TE + K + P + + E + EPD
Sbjct: 212 KEVTVTTVTTQHSREEAQVKEDNQAQSTTTVTSTESPVGKLDEKNPEIEEPEPIVAEPDA 271
Query: 446 ADGHEDD 466
DG E D
Sbjct: 272 VDGDEQD 278
>U64844-11|AAB18311.1| 482|Caenorhabditis elegans Hypothetical
protein T22F3.8 protein.
Length = 482
Score = 29.9 bits (64), Expect = 3.7
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 538 YHFAV-HSNELGYFVFSLFPVIKCYIIFMSVCLVRF*IQSFKFPNGWLQVFAFV 380
Y AV HS + + V + IKC +F++ LV + + W+ VF V
Sbjct: 397 YKVAVLHSRQFAHVVLTAIQWIKCLALFVAPALVSIFVTNESIRQQWIWVFLIV 450
>Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 28.7 bits (61), Expect = 8.6
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 299 DHKXEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDD 466
D E AP+E + K + + + E+K +K+K QP V++ L+ + D D +DD
Sbjct: 216 DDDVEAPAPQEP-SRKQKAHNQREEKKDKNKKYQP-VKEEPDLDDDDDDEDDDDDD 269
>Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 28.7 bits (61), Expect = 8.6
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 299 DHKXEKQAPKEQYTGKFRRNRKTEQKINKSKDLQPTVRKFETLNLEPDQADGHEDD 466
D E AP+E + K + + + E+K +K+K QP V++ L+ + D D +DD
Sbjct: 216 DDDVEAPAPQEP-SRKQKAHNQREEKKDKNKKYQP-VKEEPDLDDDDDDEDDDDDD 269
>Z36238-8|CAH04738.1| 448|Caenorhabditis elegans Hypothetical
protein R74.8b protein.
Length = 448
Score = 28.7 bits (61), Expect = 8.6
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 191 SHKRKRTASDXHNQTVSLRGLINANWQKLLASNL 292
SH K SD N TV + LI+ +W K+ S L
Sbjct: 352 SHNSKVAISDLGNNTVLIGNLIDTDWNKMSFSVL 385
>Z36238-7|CAA85278.2| 506|Caenorhabditis elegans Hypothetical
protein R74.8a protein.
Length = 506
Score = 28.7 bits (61), Expect = 8.6
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 191 SHKRKRTASDXHNQTVSLRGLINANWQKLLASNL 292
SH K SD N TV + LI+ +W K+ S L
Sbjct: 352 SHNSKVAISDLGNNTVLIGNLIDTDWNKMSFSVL 385
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,609,457
Number of Sequences: 27780
Number of extensions: 438064
Number of successful extensions: 1426
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1410
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3276419812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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