Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_D24
         (1144 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    47   2e-07
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    27   0.35 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   10.0 

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 47.2 bits (107), Expect = 2e-07
 Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
 Frame = +2

Query: 302 QVGDYEFTKQDIIGHGAFAMVYKG---RKRKNPSQSVAVKVVTKKGIQKASEILVKEIKI 472
           ++G  + + Q +IG GAF +V +     K  N +Q VAVK++ +    +      +EI I
Sbjct: 445 ELGPLKLSFQGVIGEGAFGIVRRAFLDLKEDNKTQ-VAVKMLKESPTSEEIRQFTQEINI 503

Query: 473 LRELTALQHKNLVAMHDCMDSPAYV--YVVMEYCNGGDLADYLQT 601
           ++ +   QH  +V++  C+         +V+EYC+ GDL  YL+T
Sbjct: 504 MKSVR--QHPYIVSLIGCVTEGRAEGPLLVVEYCSRGDLQTYLRT 546



 Score = 24.2 bits (50), Expect = 1.9
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 3/93 (3%)
 Frame = +2

Query: 644 QLAEAMSAIHAKGIVHRDLKPXNILLTHSILPXRTPXPSDITXKIXDFGFXRFLXXGNMX 823
           Q+A  M  +    +VHRDL   N+L+             + T K+ DFG  R +   N+ 
Sbjct: 600 QVALGMEHLAKTRVVHRDLAARNVLVC-----------ENHTVKVSDFGLSRDVYQDNVY 648

Query: 824 VTLXGSPM---YMXPXXIMSLKIXAKXXLWSLG 913
               G  +   +M    +   +      +WS G
Sbjct: 649 CKNGGGKLPVRWMALESLTHQRYTTYSDVWSFG 681


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 26.6 bits (56), Expect = 0.35
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
 Frame = -2

Query: 486 VNSRSILISFTSISDAFWMPFFVTTFTATDWDGFFLFL--PL*-----TIAKAPCPIISC 328
           + S+ +L +  ++       F   TF  T W  F +FL  P       TI    C + + 
Sbjct: 382 IGSQLVLHTVKTVLKTTMSTFSDITFMRTVWKFFNIFLITPFYNFNENTIHSKLCKLYAT 441

Query: 327 LVNS*SPTWITSIFTNFPLTTDMIQILFT 241
            + +    WI ++F N  L+  + Q LFT
Sbjct: 442 FLIALKLVWIVALFKNENLSEMVKQFLFT 470


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 10.0
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -2

Query: 471 ILISFTSISDAFWMPFFVTTFTATDWDGFFLFLPL 367
           I+ SF  ++DA W    +      D +GF  F  L
Sbjct: 54  IVYSFIGVNDADWSVLVIDPELDVDQNGFRNFTNL 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,960
Number of Sequences: 336
Number of extensions: 3847
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 33197234
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)