Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_D23
         (1178 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033965-1|AAH33965.1|  169|Homo sapiens NDUFA12-like protein.         50   2e-05
BC001753-1|AAH01753.2|  169|Homo sapiens NDUFA12-like protein.         50   2e-05
AB183433-1|BAD91205.1|  169|Homo sapiens Myc-induced mitochondri...    50   2e-05
BC146776-1|AAI46777.1| 1542|Homo sapiens SET binding protein 1 p...    34   1.1  
AB022660-1|BAA82444.1| 1542|Homo sapiens SET-binding protein (SE...    34   1.1  
AB007897-1|BAA24826.2| 1605|Homo sapiens KIAA0437 protein.             34   1.1  

>BC033965-1|AAH33965.1|  169|Homo sapiens NDUFA12-like protein.
          Length = 169

 Score = 50.0 bits (114), Expect = 2e-05
 Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
 Frame = +2

Query: 101 GXSRQVWRIVFRNFINSLRPKQVTGNNVGKDYIGNTYFEIPANPS-EGKR-KPSRWYDPP 274
           G S+ ++R ++R+    ++       +VG D  GN Y+ IP   +  G+  +  R  +  
Sbjct: 2   GWSQDLFRALWRSLSREVK------EHVGTDQFGNKYYYIPQYKNWRGQTIREKRIVEAA 55

Query: 275 --KGQDFQ-NPIPAEWESWLRMRRKEPPSEEEIAKN 373
             K  D++   IP EWE+W+R  RK PP+ EEI KN
Sbjct: 56  NKKEVDYEAGDIPTEWEAWIRRTRKTPPTMEEILKN 91


>BC001753-1|AAH01753.2|  169|Homo sapiens NDUFA12-like protein.
          Length = 169

 Score = 50.0 bits (114), Expect = 2e-05
 Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
 Frame = +2

Query: 101 GXSRQVWRIVFRNFINSLRPKQVTGNNVGKDYIGNTYFEIPANPS-EGKR-KPSRWYDPP 274
           G S+ ++R ++R+    ++       +VG D  GN Y+ IP   +  G+  +  R  +  
Sbjct: 2   GWSQDLFRALWRSLSREVK------EHVGTDQFGNKYYYIPQYKNWRGQTIREKRIVEAA 55

Query: 275 --KGQDFQ-NPIPAEWESWLRMRRKEPPSEEEIAKN 373
             K  D++   IP EWE+W+R  RK PP+ EEI KN
Sbjct: 56  NKKEVDYEAGDIPTEWEAWIRRTRKTPPTMEEILKN 91


>AB183433-1|BAD91205.1|  169|Homo sapiens Myc-induced mitochondria
           protein protein.
          Length = 169

 Score = 50.0 bits (114), Expect = 2e-05
 Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
 Frame = +2

Query: 101 GXSRQVWRIVFRNFINSLRPKQVTGNNVGKDYIGNTYFEIPANPS-EGKR-KPSRWYDPP 274
           G S+ ++R ++R+    ++       +VG D  GN Y+ IP   +  G+  +  R  +  
Sbjct: 2   GWSQDLFRALWRSLSREVK------EHVGTDQFGNKYYYIPQYKNWRGQTIREKRIVEAA 55

Query: 275 --KGQDFQ-NPIPAEWESWLRMRRKEPPSEEEIAKN 373
             K  D++   IP EWE+W+R  RK PP+ EEI KN
Sbjct: 56  NKKEVDYEAGDIPTEWEAWIRRTRKTPPTMEEILKN 91


>BC146776-1|AAI46777.1| 1542|Homo sapiens SET binding protein 1
            protein.
          Length = 1542

 Score = 33.9 bits (74), Expect = 1.1
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +2

Query: 218  IPANPSEGKRK--PSRWYDPPKGQDFQNPIPAEWESWLRMRRKEPPSEEEI 364
            +P  P  GKRK  P     PP+    Q P+P E E   + +RK   SE E+
Sbjct: 1490 LPKTPRGGKRKHKPQAPAQPPQQSPPQQPLPQEEEVKAKRQRKSRGSESEV 1540


>AB022660-1|BAA82444.1| 1542|Homo sapiens SET-binding protein (SEB)
            protein.
          Length = 1542

 Score = 33.9 bits (74), Expect = 1.1
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +2

Query: 218  IPANPSEGKRK--PSRWYDPPKGQDFQNPIPAEWESWLRMRRKEPPSEEEI 364
            +P  P  GKRK  P     PP+    Q P+P E E   + +RK   SE E+
Sbjct: 1490 LPKTPRGGKRKHKPQAPAQPPQQSPPQQPLPQEEEVKAKRQRKSRGSESEV 1540


>AB007897-1|BAA24826.2| 1605|Homo sapiens KIAA0437 protein.
          Length = 1605

 Score = 33.9 bits (74), Expect = 1.1
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +2

Query: 218  IPANPSEGKRK--PSRWYDPPKGQDFQNPIPAEWESWLRMRRKEPPSEEEI 364
            +P  P  GKRK  P     PP+    Q P+P E E   + +RK   SE E+
Sbjct: 1553 LPKTPRGGKRKHKPQAPAQPPQQSPPQQPLPQEEEVKAKRQRKSRGSESEV 1603


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,932,729
Number of Sequences: 237096
Number of extensions: 2093404
Number of successful extensions: 4292
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4279
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16513869000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)