Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_D23
         (1178 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                29   0.11 
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    25   1.7  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    24   3.0  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    24   3.0  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    24   3.0  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    23   5.2  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   9.1  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   9.1  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   9.1  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   9.1  

>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 28.7 bits (61), Expect = 0.11
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +3

Query: 159 QNRLLETMLVKIT*VTLILKYLLIQVKVKESHHVGMIHLKVRISKIQYQPNGSP 320
           QNRL E +L+K   + ++     I   ++  H+ G++H  V+   I    NG P
Sbjct: 144 QNRLDEAILIKNERICILKS---ITCALQFCHNAGIVHADVKPKNILMSKNGQP 194


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 104 LHXTXEMREIVRGDFEFEETXFR 36
           L  +  M++IV  DF F+E  FR
Sbjct: 380 LALSNRMQKIVNNDFNFDEVNFR 402


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 621 NSFNHNYK*CYLCNLNKFFHNI 556
           N  N+NYK  Y  N  K ++NI
Sbjct: 90  NYNNNNYKKLYCNNYKKLYYNI 111


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 621 NSFNHNYK*CYLCNLNKFFHNI 556
           N  N+NYK  Y  N  K ++NI
Sbjct: 90  NYNNNNYKKLYCNNYKKLYYNI 111


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 621 NSFNHNYK*CYLCNLNKFFHNI 556
           N  N+NYK  Y  N  K ++NI
Sbjct: 90  NYNNNNYKKLYCNNYRKLYYNI 111


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 627 KTNSFNHNYK*CYLCNLNKFFHNI 556
           KT   N+NYK  Y  N  K ++NI
Sbjct: 88  KTIHNNNNYKYNYNNNCKKLYYNI 111


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +2

Query: 329 MRRKEPPSEEEIAKNV-AIAQI 391
           +R+KEPP    +AK +  IA+I
Sbjct: 447 LRKKEPPHPIRVAKTIDVIARI 468


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +2

Query: 329 MRRKEPPSEEEIAKNV-AIAQI 391
           +R+KEPP    +AK +  IA+I
Sbjct: 433 LRKKEPPHPIRVAKTIDVIARI 454


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +2

Query: 329 MRRKEPPSEEEIAKNV-AIAQI 391
           +R+KEPP    +AK +  IA+I
Sbjct: 467 LRKKEPPHPIRVAKTIDVIARI 488


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +2

Query: 329 MRRKEPPSEEEIAKNV-AIAQI 391
           +R+KEPP    +AK +  IA+I
Sbjct: 416 LRKKEPPHPIRVAKTIDVIARI 437


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,900
Number of Sequences: 438
Number of extensions: 4393
Number of successful extensions: 30
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 40126833
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)