Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_D20
         (1221 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   2.6  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    26   2.6  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    26   2.6  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   5.9  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 2.6
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = +1

Query: 319 GGGVGGXGXXGXXXXGXGXGGXXG 390
           GGGVGG G  G    G G GG  G
Sbjct: 292 GGGVGGGG--GGGGGGGGGGGSAG 313



 Score = 25.8 bits (54), Expect = 2.6
 Identities = 12/31 (38%), Positives = 12/31 (38%)
 Frame = +1

Query: 319 GGGVGGXGXXGXXXXGXGXGGXXGKXGXXGG 411
           GGG GG         G G  G  G  G  GG
Sbjct: 841 GGGAGGPLRGSSGGAGGGSSGGGGSGGTSGG 871


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.8 bits (54), Expect = 2.6
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = +1

Query: 319 GGGVGGXGXXGXXXXGXGXGGXXG 390
           GGGVGG G  G    G G GG  G
Sbjct: 292 GGGVGGGG--GGGGGGGGGGGSAG 313


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.8 bits (54), Expect = 2.6
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = +1

Query: 319 GGGVGGXGXXGXXXXGXGXGGXXG 390
           GGGVGG G  G    G G GG  G
Sbjct: 244 GGGVGGGG--GGGGGGGGGGGSAG 265


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 5.9
 Identities = 12/39 (30%), Positives = 13/39 (33%)
 Frame = -2

Query: 410 PPXXPXFPXXPPXPXPLXXXPXXPXPPTPPPXXXFFNXG 294
           PP  P  P   P P PL   P      + PP       G
Sbjct: 582 PPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFG 620



 Score = 24.2 bits (50), Expect = 7.8
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = -2

Query: 410 PPXXPXFPXXPPXPXPLXXXPXXPXPPTP 324
           P   P  P   P P P    P  P PP+P
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGP-PPSP 597


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 305,960
Number of Sequences: 2352
Number of extensions: 2557
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 138973980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)