Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_D20
(1221 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 35 0.10
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 35 0.10
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.41
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.41
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 31 2.2
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 31 2.2
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 2.9
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 2.9
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 30 2.9
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 30 3.8
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 3.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.0
U38378-1|AAA79751.1| 418|Caenorhabditis elegans Hypothetical pr... 29 5.0
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 5.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 5.0
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 26 5.4
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 26 5.8
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 6.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 8.8
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 29 8.8
AF043704-2|AAX88816.1| 407|Caenorhabditis elegans Prion-like-(q... 29 8.8
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 35.1 bits (77), Expect = 0.10
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 389 PXXPPXPXPLXXXPXXPXPPTPPP 318
P PP P PL P P PP PPP
Sbjct: 73 PPLPPPPLPLSNPPAKPTPPPPPP 96
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 35.1 bits (77), Expect = 0.10
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 389 PXXPPXPXPLXXXPXXPXPPTPPP 318
P PP P PL P P PP PPP
Sbjct: 295 PPLPPPPLPLSNPPAKPTPPPPPP 318
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.41
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -2
Query: 431 PXAXXXXPPXXPXFPXXPPXPXPLXXXPXXPXPPTPPP 318
P + PP P P P P P P PP PPP
Sbjct: 267 PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 304
Score = 29.9 bits (64), Expect = 3.8
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -2
Query: 410 PPXXPXFPXXPPXPXPLXXXPXXPXPPTPPP 318
PP P P P P P+ P P PPP
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPP 291
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.41
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -2
Query: 431 PXAXXXXPPXXPXFPXXPPXPXPLXXXPXXPXPPTPPP 318
P + PP P P P P P P PP PPP
Sbjct: 277 PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 314
Score = 29.9 bits (64), Expect = 3.8
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -2
Query: 410 PPXXPXFPXXPPXPXPLXXXPXXPXPPTPPP 318
PP P P P P P+ P P PPP
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPP 301
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 30.7 bits (66), Expect = 2.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 389 PXXPPXPXPLXXXPXXPXPPTPPP 318
P PP P P+ P PP PPP
Sbjct: 155 PPPPPPPPPVSVPSSKPTPPPPPP 178
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 30.7 bits (66), Expect = 2.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 389 PXXPPXPXPLXXXPXXPXPPTPPP 318
P PP P P+ P PP PPP
Sbjct: 155 PPPPPPPPPVSVPSSKPTPPPPPP 178
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 30.3 bits (65), Expect = 2.9
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -2
Query: 431 PXAXXXXPPXXPXFPXXPPXPXPLXXXPXXPXPPTPPP 318
P PP P PP P P P PP PPP
Sbjct: 50 PMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPP 87
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -2
Query: 410 PPXXPXFPXXPPXPXPLXXXPXXPXPPTPPP 318
P P P PP P P PP PPP
Sbjct: 48 PMPMPVCPPPPPCPAQFCPPPPICPPPPPPP 78
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.3 bits (65), Expect = 2.9
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 398 PXFPXXPPXPXPLXXXPXXPXPPTPPP 318
P P PP P P P PP PPP
Sbjct: 497 PPPPPLPPIATPSSVPPPPPPPPPPPP 523
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +1
Query: 319 GGGVGGXGXXGXXXXGXGXGGXXGKXGXXGG 411
GGG+GG G G G G GG G G GG
Sbjct: 106 GGGMGGGGYGGGGYGGGGDGG-GGYGGYGGG 135
Score = 30.3 bits (65), Expect = 2.9
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +1
Query: 319 GGGVGGXGXXGXXXXGXGXGGXXGKXGXXGG 411
GGG+GG G G G G GG G G GG
Sbjct: 167 GGGMGGGGYGGGGDGGYGGGGFGG--GGMGG 195
Score = 29.9 bits (64), Expect = 3.8
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +1
Query: 319 GGGVGGXGXXGXXXXGXG-XGGXXGKXGXXGG 411
GGG+GG G G G G GG G G GG
Sbjct: 197 GGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGG 228
Score = 29.9 bits (64), Expect = 3.8
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +1
Query: 319 GGGVGGXGXXGXXXXGXG-XGGXXGKXGXXGG 411
GGG+GG G G G G GG G G GG
Sbjct: 207 GGGMGGGGYGGGGDGGYGPSGGYGGGYGPGGG 238
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -2
Query: 431 PXAXXXXPPXXPXFPXXPPXPXPLXXXPXXPXPPTPPP 318
P A P P PP P P P PPTP P
Sbjct: 94 PPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSP 131
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 3.8
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = -2
Query: 431 PXAXXXXPPXXPXFPXXPPXPXP--LXXXPXXPXPPTP 324
P PP P F PP P P L P P P TP
Sbjct: 98 PPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRPKTP 135
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 5.0
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -2
Query: 410 PPXXPXFPXXPPXPXPLXXXPXXPXPPTPPP 318
PP P PP P P P P PPP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPP 746
Score = 28.7 bits (61), Expect = 8.8
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -2
Query: 431 PXAXXXXPPXXPXFPXXPPXPXPLXXXPXXPXPPTPPPXXXF 306
P PP P PP P P PP PPP F
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 5.0
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -2
Query: 410 PPXXPXFPXXPPXPXPLXXXPXXPXPPTPPP 318
PP P PP P P P P PPP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPP 746
Score = 28.7 bits (61), Expect = 8.8
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -2
Query: 431 PXAXXXXPPXXPXFPXXPPXPXPLXXXPXXPXPPTPPPXXXF 306
P PP P PP P P PP PPP F
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
>U38378-1|AAA79751.1| 418|Caenorhabditis elegans Hypothetical
protein R11F4.3 protein.
Length = 418
Score = 29.5 bits (63), Expect = 5.0
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -2
Query: 407 PXXPXFPXXPPXPXPLXXXPXXPXPPTPPP 318
P P F PP P P PP PPP
Sbjct: 157 PQPPRFAEVPPIPDAPTNPPTTTTPPPPPP 186
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.5 bits (63), Expect = 5.0
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -2
Query: 398 PXFPXXPPXPXPLXXXPXXPXPPTPPP 318
P P P P P+ P PP PPP
Sbjct: 34 PAAPACAPPPPPMCGCAPPPPPPPPPP 60
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 5.0
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -2
Query: 410 PPXXPXFPXXPPXPXPLXXXPXXPXPPTPPP 318
PP P PP P P P P PPP
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPP 329
Score = 28.7 bits (61), Expect = 8.8
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -2
Query: 431 PXAXXXXPPXXPXFPXXPPXPXPLXXXPXXPXPPTPPPXXXF 306
P PP P PP P P PP PPP F
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 5.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 389 PXXPPXPXPLXXXPXXPXPPTPPP 318
P PP P P P PP PPP
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPPP 1363
Score = 29.1 bits (62), Expect = 6.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 389 PXXPPXPXPLXXXPXXPXPPTPPP 318
P PP P P P PP PPP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPP 1361
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 5.0
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -2
Query: 431 PXAXXXXPPXXPXFPXXPPXPXPLXXXPXXPXPPTPPP 318
P PP PP P P P PP PPP
Sbjct: 559 PIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 25.8 bits (54), Expect(2) = 5.4
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 350 PXXPXPPTPPPXXXFF 303
P P PP PPP FF
Sbjct: 1009 PGGPPPPPPPPPADFF 1024
Score = 21.8 bits (44), Expect(2) = 5.4
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = -2
Query: 431 PXAXXXXPPXXPXFPXXPPXPXP 363
P A P P P PP P P
Sbjct: 995 PSAAAPSAPKAPAGPGGPPPPPP 1017
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 25.8 bits (54), Expect(2) = 5.8
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 350 PXXPXPPTPPPXXXFF 303
P P PP PPP FF
Sbjct: 248 PGGPPPPPPPPPADFF 263
Score = 21.8 bits (44), Expect(2) = 5.8
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = -2
Query: 431 PXAXXXXPPXXPXFPXXPPXPXP 363
P A P P P PP P P
Sbjct: 234 PSAAAPSAPKAPAGPGGPPPPPP 256
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = -2
Query: 389 PXXPPXPXPLXXXPXXPXPPTP--PP 318
P PP P P+ P P PP P PP
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPP 53
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 8.8
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = -1
Query: 411 PPPXPXLSXPTPXXXPXXPXPXPXXTSHTXP 319
PPP P P P P P P H+ P
Sbjct: 135 PPPPPHYPPPPPHYPPPPPAPHSAYIDHSAP 165
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 28.7 bits (61), Expect = 8.8
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +1
Query: 268 KXXXXQXKKPXLKKXXXGGGVGGXGXXGXXXXGXGXGGXXGKXGXXG 408
K + KKP ++ GG GG G G G G G G G
Sbjct: 446 KPPQEKKKKPVMRGRGFGGAGGGAGNHGQRGGQRGGGQWGGNAGPGG 492
>AF043704-2|AAX88816.1| 407|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 72
protein.
Length = 407
Score = 28.7 bits (61), Expect = 8.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -2
Query: 380 PPXPXPLXXXPXXPXPPTPP 321
PP P P P P PP PP
Sbjct: 343 PPSPLPTTSGPSPPSPPAPP 362
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,229,144
Number of Sequences: 27780
Number of extensions: 89296
Number of successful extensions: 1210
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3370329934
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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