Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_D19
(1226 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC7D4.10 |vma13||V-type ATPase subunit H|Schizosaccharomyces p... 81 2e-16
SPBC354.14c |vac8||vacuolar protein Vac8|Schizosaccharomyces pom... 31 0.33
SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase |Schizos... 28 3.0
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 28 3.0
SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4 |Schi... 27 4.0
SPCC1450.16c |||triacylglycerol lipase|Schizosaccharomyces pombe... 27 5.3
SPAC1952.06c |||DUF1716 family protein|Schizosaccharomyces pombe... 27 7.0
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 27 7.0
SPCC16C4.02c |||DUF1941 family protein|Schizosaccharomyces pombe... 27 7.0
SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|c... 26 9.3
>SPAC7D4.10 |vma13||V-type ATPase subunit H|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 450
Score = 81.4 bits (192), Expect = 2e-16
Identities = 66/258 (25%), Positives = 124/258 (48%), Gaps = 7/258 (2%)
Frame = +2
Query: 251 SEIRQTQINWQSYLQSQMITQRDHDFIVNLDQR---GQKDLPDKNPDACAEVFLNLLTHI 421
+ +R I WQ Y +S + + + I NL + +++ A + +FL LL+
Sbjct: 29 NNVRCVAIPWQGYQRSGSLEENELQEIENLTGKPLSAYVKTAEEDTTAYSNLFLKLLSMK 88
Query: 422 SKDHTIQYILVLIDDILSEDKSRVKIFRETKFSGNVWQPFLNLLNRQDEFVQHMTARIIA 601
+ + LV + D L + F + + + + +N D+ + + AR+ A
Sbjct: 89 DTPDVVNFALVKLADTLLNSNKFLSAFGPAFY--DFLEKDESYINYLDDDSKLLFARVFA 146
Query: 602 KLACWHPQLMDKSDLHFYLSWLKDQLKTNNNDYIQSVARCLQMMLRIDEYRFAFLSVDGI 781
+ P + K+ +L +L +++ N +CL +L + +R+A + +
Sbjct: 147 LCSSSSPCSVAKA-FTLFLEYLGKLMQSLNPLTRLFAVQCLNGVLTLKAHRYALWAENTC 205
Query: 782 S-TLLSILASRV-NFQVQYQLVFCLWVLTFNPLLAEKMNK-FNVIPILADILSDSVKEKV 952
S L +L + + + Q+QY +FC W LTF +A+ +NK F++I +L I+ K KV
Sbjct: 206 SFRLAELLRNSIGDTQLQYYSLFCFWQLTFESHIAQDINKRFDLIKLLVQIIRSDTKTKV 265
Query: 953 TRIVLAVFRNLIEK-PED 1003
R+VLA+ NLI+K P+D
Sbjct: 266 YRLVLAILVNLIDKAPKD 283
>SPBC354.14c |vac8||vacuolar protein Vac8|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 550
Score = 31.1 bits (67), Expect = 0.33
Identities = 40/196 (20%), Positives = 81/196 (41%), Gaps = 5/196 (2%)
Frame = +2
Query: 503 RETKFSGNVWQPFLNLLNRQDEFVQHMTARIIAKLA--CWHPQLMDKSDLHFYLSWLKDQ 676
R+ S ++LL D VQ+ I+ +A H + + +S+ S + Q
Sbjct: 201 RQQLVSAGTIPVLVSLLPSSDTDVQYYCTTSISNIAVDAVHRKRLAQSEPKLVRSLI--Q 258
Query: 677 LKTNNNDYIQSVARCLQMMLRIDE-YRFAFLSVDGISTLLSILASRVNFQVQYQLVFCLW 853
L ++ +Q A L DE Y+ + + + +LL +L S + V C+
Sbjct: 259 LMDTSSPKVQCQAALALRNLASDERYQIEIVQSNALPSLLRLLRSSY-LPLILASVACIR 317
Query: 854 VLTFNPLLAEKMNKFNVIPILADILSDSVKEKVTRIVLAVFRNLIEKPE--DQQVAXSTX 1027
++ +PL + + L D+LS + E++ ++ RNL E + + +
Sbjct: 318 NISIHPLNESPIIDAGFLRPLVDLLSCTENEEIQCHAVSTLRNLAASSERNKRAIIEANA 377
Query: 1028 XPWVQCXVLKQXVNXE 1075
++C +L V+ +
Sbjct: 378 IQKLRCLILDAPVSVQ 393
>SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 891
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 813 TLEARIDSKVDIP-STERKAKRYSSIRSIICRHRATDWI 700
TLE + K + ST + +RYS+ ++ H A++W+
Sbjct: 566 TLELSLSMKKALTLSTNERNQRYSNCLDVVLTHSASNWV 604
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 27.9 bits (59), Expect = 3.0
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -1
Query: 266 FGVSHLPGSVGRWWPQSCRFFR-HLALELTD*HFPR 162
FG+ LP +VG+WW S + R H+ ++ D FP+
Sbjct: 203 FGIV-LPYAVGKWWYGSRTYTRDHVHVDTVDEWFPK 237
>SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 865
Score = 27.5 bits (58), Expect = 4.0
Identities = 31/144 (21%), Positives = 63/144 (43%), Gaps = 1/144 (0%)
Frame = +2
Query: 497 IFRETKFSGNVWQPFLNLLNRQDEFVQHMTARIIAKLACWHPQLMDK-SDLHFYLSWLKD 673
I+R + S + + N+ N D F+Q + ++ L +P++ DK SDL + D
Sbjct: 248 IYRIRQLSTSTYSSEHNIGNISDPFLQVKILQFLSILGQNNPKIYDKMSDLLAQVCTNTD 307
Query: 674 QLKTNNNDYIQSVARCLQMMLRIDEYRFAFLSVDGISTLLSILASRVNFQVQYQLVFCLW 853
+ N + R + +D + L V G++ L L +R N +Y + L
Sbjct: 308 SSRNAGNAILYQAVRTI-----LDLNSDSSLRVLGVNILAKFLGNRDN-NTRYVALNMLK 361
Query: 854 VLTFNPLLAEKMNKFNVIPILADI 925
++ + A + ++ ++ L D+
Sbjct: 362 LVVNSEENAVQRHRSTILACLNDV 385
>SPCC1450.16c |||triacylglycerol lipase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 513
Score = 27.1 bits (57), Expect = 5.3
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -2
Query: 748 FIDTQHHLQTPGHRLDIVVVIGLELIFK 665
F D HH + G+ L ++ ++GLE+ ++
Sbjct: 397 FYDELHHHRVSGYSLKMIRLVGLEMAYR 424
>SPAC1952.06c |||DUF1716 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 564
Score = 26.6 bits (56), Expect = 7.0
Identities = 18/70 (25%), Positives = 35/70 (50%)
Frame = +2
Query: 665 LKDQLKTNNNDYIQSVARCLQMMLRIDEYRFAFLSVDGISTLLSILASRVNFQVQYQLVF 844
L+D + + + +++V CL +++ + + FL +GI L IL + + +Y +
Sbjct: 301 LRDPTQGSEEEMMENVFDCLCSLVQETKGKSLFLKEEGIE--LCILNMKHKGKSRYSTIK 358
Query: 845 CLWVLTFNPL 874
L L F PL
Sbjct: 359 VLDYLLFGPL 368
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 26.6 bits (56), Expect = 7.0
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -2
Query: 505 TKYLHPRFIFRKNVINEHKNVLNGVVLADMRQEVEKDFGTGIGIL 371
+KY P+F+F K ++E + + +G+ + M V + G I +L
Sbjct: 46 SKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFFENGKQIDML 90
>SPCC16C4.02c |||DUF1941 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 548
Score = 26.6 bits (56), Expect = 7.0
Identities = 16/66 (24%), Positives = 35/66 (53%)
Frame = +2
Query: 506 ETKFSGNVWQPFLNLLNRQDEFVQHMTARIIAKLACWHPQLMDKSDLHFYLSWLKDQLKT 685
E++ S + + +LL+ QD+ + ++ ++AKL HP L+ K + +L L +
Sbjct: 58 ESRGSMELLENCFSLLHAQDDTSKFVSLTMLAKLLNDHPNLIFKCWERMDMKFLDRLLLS 117
Query: 686 NNNDYI 703
+ +Y+
Sbjct: 118 THYEYV 123
>SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 683
Score = 26.2 bits (55), Expect = 9.3
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 470 LSEDKSRVKIFRETKFSGNVWQPFLNLLNRQDEFVQHMTARIIAKLACWHPQLMD 634
L DK+++K+F E K ++ P N++ D F +I +L C H LM+
Sbjct: 76 LQNDKTKLKLFGEIKVHQSMSHP--NIVGFIDCFEDSTNIYLILEL-CEHKSLME 127
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,262,320
Number of Sequences: 5004
Number of extensions: 84792
Number of successful extensions: 243
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 665388788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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