Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_D15
(1228 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7S7A0 Cluster: Predicted protein; n=1; Nematostella ve... 112 2e-23
UniRef50_UPI0000DB79F0 Cluster: PREDICTED: similar to porcupine ... 109 1e-22
UniRef50_Q9H237 Cluster: Probable protein-cysteine N-palmitoyltr... 105 2e-21
UniRef50_Q4S5Y9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 103 9e-21
UniRef50_Q4T256 Cluster: Chromosome undetermined SCAF10335, whol... 99 3e-19
UniRef50_UPI0000D5544A Cluster: PREDICTED: similar to porcupine ... 94 6e-18
UniRef50_Q7Q3N5 Cluster: Probable protein-cysteine N-palmitoyltr... 91 7e-17
UniRef50_Q9VWV9 Cluster: Protein-cysteine N-palmitoyltransferase... 69 2e-10
UniRef50_Q22CE6 Cluster: MBOAT family protein; n=1; Tetrahymena ... 52 3e-05
UniRef50_Q96MW6 Cluster: CDNA FLJ31778 fis, clone NT2RI2008188, ... 49 3e-04
UniRef50_A6F3Z3 Cluster: GGDEF domain/EAL domain protein; n=1; M... 42 0.032
UniRef50_UPI00004996F6 Cluster: conserved hypothetical protein; ... 41 0.057
UniRef50_Q22329 Cluster: More of ms protein 1; n=2; Caenorhabdit... 38 0.70
UniRef50_Q9K9R7 Cluster: BH2578 protein; n=1; Bacillus haloduran... 36 2.8
UniRef50_A2DJP8 Cluster: Putative uncharacterized protein; n=1; ... 35 4.9
UniRef50_O59785 Cluster: Membrane transporter; n=1; Schizosaccha... 35 4.9
UniRef50_Q1M9M6 Cluster: Putative uncharacterized protein; n=1; ... 34 6.5
UniRef50_Q11VC6 Cluster: Possible integral membrane protein; n=1... 34 6.5
>UniRef50_A7S7A0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 396
Score = 112 bits (269), Expect = 2e-23
Identities = 64/220 (29%), Positives = 109/220 (49%)
Frame = +2
Query: 281 CTEPTVYEGLKXAKDILFSNLLLRFTIQFLPLPHNVRHSLSLITGVYLLYNNIGSAIFWT 460
C PT+ + L +L ++LR I L +P + H +S +TG+ + I + +
Sbjct: 29 CAVPTITQTLDNVGPLLVMCVILRL-IAILRVPRWLVHLVSALTGIGAMTIFIKEYMGYP 87
Query: 461 IGLTTGSYTMITVLSWTKSKRRSLFVSFTIITFLLLCEIYVLNPKMWQQIRGIQMIAAMK 640
+ + Y ++ V K R L +S + ++L CE+++ +P W ++RG QMI MK
Sbjct: 88 LVMCLVGYPVLFVF---KGYRGPL-MSLVCLVYILTCELFIASPSAWHRVRGTQMILVMK 143
Query: 641 IISVAIELDRNIYNNILNPVEYGGYIFCPANCILGPWMSFQSYNKSLEVRFLCKRWXXXX 820
+IS+A + D+ I + N +EY GY ++ I GP+MS+ Y+K L + L W
Sbjct: 144 MISIAFDYDQGILAQLPNLLEYFGYSISASSIIFGPFMSYDDYSKILTGKRLSLSWIFGV 203
Query: 821 XXXXXXXXXXXXXXXCLIPWYIDDDMPKWLIAYRDAQAFR 940
C+ P+ +D KWL+AY+ A +FR
Sbjct: 204 TRSFLLCFICLLHSVCVSPYIFAEDDNKWLVAYQTAMSFR 243
>UniRef50_UPI0000DB79F0 Cluster: PREDICTED: similar to porcupine
homolog; n=2; Apocrita|Rep: PREDICTED: similar to
porcupine homolog - Apis mellifera
Length = 461
Score = 109 bits (262), Expect = 1e-22
Identities = 65/234 (27%), Positives = 103/234 (44%)
Frame = +2
Query: 239 EDVYAENTWTYLSMCTEPTVYEGLKXAKDILFSNLLLRFTIQFLPLPHNVRHSLSLITGV 418
E++ E + C PT+Y+ + + S ++ R + H H LS++ G+
Sbjct: 32 ENMERETLFELYQYCLRPTIYDTISYILPLFISTIIFRLCAYSQHISHKTFHVLSMLIGI 91
Query: 419 YLLYNNIGSAIFWTIGLTTGSYTMITVLSWTKSKRRSLFVSFTIITFLLLCEIYVLNPKM 598
+Y + ++ + L SY + + K R + + + + CE + + P +
Sbjct: 92 CNIYFYVIECLYTLLILCIISYITLYI---PKKYCRYMGIFLPSLFIITYCE-FTMPPII 147
Query: 599 WQQIRGIQMIAAMKIISVAIELDRNIYNNILNPVEYGGYIFCPANCILGPWMSFQSYNKS 778
W +IR + M AMK IS+AIE + NN N Y GY+FC C+ GPW+SF+ Y
Sbjct: 148 WHKIRSVVMTMAMKTISIAIE--KIDTNNSPNIYAYMGYMFCSVTCLFGPWISFKDYISI 205
Query: 779 LEVRFLCKRWXXXXXXXXXXXXXXXXXXXCLIPWYIDDDMPKWLIAYRDAQAFR 940
+ K W C W I + KWL+AYRDA AFR
Sbjct: 206 RYITNQDKWWILYTIQYAFVSFLFLTVSNCWAQWMIMETSWKWLLAYRDALAFR 259
>UniRef50_Q9H237 Cluster: Probable protein-cysteine
N-palmitoyltransferase porcupine; n=54;
Euteleostomi|Rep: Probable protein-cysteine
N-palmitoyltransferase porcupine - Homo sapiens (Human)
Length = 461
Score = 105 bits (253), Expect = 2e-21
Identities = 57/179 (31%), Positives = 99/179 (55%)
Frame = +2
Query: 272 LSMCTEPTVYEGLKXAKDILFSNLLLRFTIQFLPLPHNVRHSLSLITGVYLLYNNIGSAI 451
L C PT +GL +L L R + L LP ++H+ ++ G + LY+ +
Sbjct: 14 LQGCLLPTAQQGLDQIWLLLAICLACRLLWR-LGLPSYLKHASTVAGGFFSLYHFFQLHM 72
Query: 452 FWTIGLTTGSYTMITVLSWTKSKRRSLFVSFTIITFLLLCEIYVLNPKMWQQIRGIQMIA 631
W + L+ Y ++ + S R +F+S TI+ +LL+ E+++++ W ++RG QMI
Sbjct: 73 VWVVLLSLLCYLVLFLCR--HSSHRGVFLSVTILIYLLMGEMHMVDTVTWHKMRGAQMIV 130
Query: 632 AMKIISVAIELDRNIYNNILNPVEYGGYIFCPANCILGPWMSFQSYNKSLEVRFLCKRW 808
AMK +S+ +LDR + +PVE+ GY++ + GPW+SF SY ++++ R L RW
Sbjct: 131 AMKAVSLGFDLDRGEVGTVPSPVEFMGYLYFVGTIVFGPWISFHSYLQAVQGRPLSCRW 189
>UniRef50_Q4S5Y9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 893
Score = 103 bits (247), Expect = 9e-21
Identities = 51/141 (36%), Positives = 84/141 (59%)
Frame = +2
Query: 374 LPHNVRHSLSLITGVYLLYNNIGSAIFWTIGLTTGSYTMITVLSWTKSKRRSLFVSFTII 553
LP V+H ++ G Y+LY + W + L+ Y + + S R F+S T++
Sbjct: 339 LPSVVKHLSTVAGGFYVLYLFFELHMIWVVLLSLLCYLFLFLCR--HSTIRGAFLSITVL 396
Query: 554 TFLLLCEIYVLNPKMWQQIRGIQMIAAMKIISVAIELDRNIYNNILNPVEYGGYIFCPAN 733
+LLL E+++++ W ++RG QM+ AMK IS+A +LDR + ++ +P+E+ GYI+
Sbjct: 397 IYLLLGELHMMDATKWHKMRGSQMVVAMKAISLAFDLDRGVVASVPSPLEFMGYIYFVGT 456
Query: 734 CILGPWMSFQSYNKSLEVRFL 796
I GPW+SF SY ++LE R L
Sbjct: 457 VIFGPWISFNSYKEALEGRRL 477
>UniRef50_Q4T256 Cluster: Chromosome undetermined SCAF10335, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF10335, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 869
Score = 98.7 bits (235), Expect = 3e-19
Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 1/183 (0%)
Frame = +2
Query: 263 WTYLS-MCTEPTVYEGLKXAKDILFSNLLLRFTIQFLPLPHNVRHSLSLITGVYLLYNNI 439
W L+ C + +GL+ +L LL R + V+H SL+ G+Y L+
Sbjct: 76 WQQLAGSCGLSVLEQGLQEVWKLLLLCLLCRLCFR-QGGASTVKHVASLLAGIYALFLFF 134
Query: 440 GSAIFWTIGLTTGSYTMITVLSWTKSKRRSLFVSFTIITFLLLCEIYVLNPKMWQQIRGI 619
++W + L G ++ +LS S R L +S ++ FLL+ E++ ++ W +IRG
Sbjct: 135 HVHVWWVL-LLGGLCYLVLLLSRACSCR-GLLLSALVLLFLLIGELHFIDLVTWNKIRGS 192
Query: 620 QMIAAMKIISVAIELDRNIYNNILNPVEYGGYIFCPANCILGPWMSFQSYNKSLEVRFLC 799
QM+ AMK+IS+ ++DR + +P E+ GY+F I GPWMSF +Y K++ + L
Sbjct: 193 QMVVAMKVISLGFDMDRGAVAGLPSPAEFFGYVFFVGTVIFGPWMSFSTYKKAVGGQPLS 252
Query: 800 KRW 808
W
Sbjct: 253 WLW 255
>UniRef50_UPI0000D5544A Cluster: PREDICTED: similar to porcupine
homolog; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to porcupine homolog - Tribolium castaneum
Length = 451
Score = 94.3 bits (224), Expect = 6e-18
Identities = 66/239 (27%), Positives = 111/239 (46%), Gaps = 6/239 (2%)
Frame = +2
Query: 242 DVYAENTWTYL-SMCTEPTVYEGLKXAKDILFSNLLLRFTIQFLPLPHNVRHSLSLITGV 418
D+Y E T + + C ++ + ++ NL+ + +P +V H + G+
Sbjct: 19 DMYYEETALDIWNNCVVLSILSVVPSVLSLVVPNLVFGCLVSTGFIPLSVLHFSTGCIGI 78
Query: 419 YL---LYNNIGSAIFWTIGLTTGSYTMI-TVLSWTKSKRRSLFVSFTIITFLLLCEIYVL 586
YL L ++ G + + SY ++ T K + S+ + T I L+LCE Y++
Sbjct: 79 YLVSTLESHFGKIVLLFCWII--SYVLLYTGFQLKKYSKSSISLKLTFIILLVLCEYYLI 136
Query: 587 NPKMWQQIRGIQMIAAMKIISVAIELDRNIYNNILNPVEYGGYIFCPANCILGPWMSFQS 766
++W QIRGI M+ MK++S+A ++ N + + ++Y GY C AN + GPW+SF
Sbjct: 137 EAEVWLQIRGIVMVLVMKVLSLADDI--NKLDAMPGFIQYFGYTLCGANVMFGPWISFSD 194
Query: 767 Y-NKSLEVRFLCKRWXXXXXXXXXXXXXXXXXXXCLIPWYIDDDMPKWLIAYRDAQAFR 940
Y N + W C + I DD +WLIAY++A AFR
Sbjct: 195 YLNFYKKPTKKNLIWICAIVKVLTTSLFFLTLSNCWSGYIISDDANRWLIAYKEAFAFR 253
>UniRef50_Q7Q3N5 Cluster: Probable protein-cysteine
N-palmitoyltransferase porcupine; n=1; Anopheles
gambiae|Rep: Probable protein-cysteine
N-palmitoyltransferase porcupine - Anopheles gambiae
(African malaria mosquito)
Length = 495
Score = 90.6 bits (215), Expect = 7e-17
Identities = 54/157 (34%), Positives = 79/157 (50%), Gaps = 6/157 (3%)
Frame = +2
Query: 317 AKDILFSNLLLRFTIQFLPLPHNVRHSLSLITGVYLLYNNIGSAIFWTIGLTTGSYTMI- 493
A ++LFS L+L + P H LS + G L+Y I + + L Y +
Sbjct: 54 AINLLFSVLVL-IVRKLFPTAQRSLHLLSCVCGAALVYRVIDHGFYHFLQLAVSLYAVQW 112
Query: 494 TVLSWTKSKRRSLFVSFTIITF----LLLCEIYVLNPKMWQQIRGIQMIAAMKIISVAIE 661
T+ W R + F +I + LL+ E+ +P+ W +IRG QMI MK +S+A +
Sbjct: 113 TLHRWLTGTGRYIKTPFIVIAYGIGNLLVSELLEPSPETWNRIRGTQMILLMKALSLAFD 172
Query: 662 LDRN-IYNNILNPVEYGGYIFCPANCILGPWMSFQSY 769
D N + L + Y GYI CPAN +LGPW+SF Y
Sbjct: 173 TDDNHSLRSQLTVLSYSGYILCPANIVLGPWISFNDY 209
>UniRef50_Q9VWV9 Cluster: Protein-cysteine N-palmitoyltransferase
porcupine; n=2; Sophophora|Rep: Protein-cysteine
N-palmitoyltransferase porcupine - Drosophila
melanogaster (Fruit fly)
Length = 525
Score = 69.3 bits (162), Expect = 2e-10
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 8/181 (4%)
Frame = +2
Query: 272 LSMCTEPTVYEGLKXAKDILFSNLLLRFTIQFLPLPHNVR-----HSLSLITGVYLLYNN 436
L C +P+V + ++ +L LL R + H G+ +L
Sbjct: 72 LQSCVQPSVLQVMQYVAPMLLLCLLCRLLCLLYSQRRRLTSLAPLHLFHFACGLIILQIT 131
Query: 437 IGSAIFWTIGLTTGSYTMITVLSWTKSKRRSLFVSFTIITFLLLCEIYVLNPKM-WQQIR 613
+G + + L Y ++ +L +R + ++ + L E+ + + W Q+R
Sbjct: 132 VGYRLLLLLLLAAVGYLLLQLLRL--GRRGAQVLAVLTVGSQFLYELLIWRRRSDWPQLR 189
Query: 614 GIQMIAAMKIISVAIELDRN--IYNNILNPVEYGGYIFCPANCILGPWMSFQSYNKSLEV 787
GIQM+ MK+IS+ +L + + I P Y GYI+ PA C LGPW+SF Y L
Sbjct: 190 GIQMVVNMKLISLGFDLTASGQLQARIPGPFAYLGYIYSPATCALGPWVSFGCYMDCLVP 249
Query: 788 R 790
R
Sbjct: 250 R 250
>UniRef50_Q22CE6 Cluster: MBOAT family protein; n=1; Tetrahymena
thermophila SB210|Rep: MBOAT family protein -
Tetrahymena thermophila SB210
Length = 451
Score = 52.0 bits (119), Expect = 3e-05
Identities = 35/139 (25%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Frame = +2
Query: 380 HNVRHSLSLITGVYLLYNNIGSAIFWTIGLTTGSYTMITVLSWTKSKRRSLFVSFTIITF 559
H +R+ SL+TG++L Y I ++ T+ + +Y + ++L KS ++FT++
Sbjct: 47 HFLRNMYSLLTGLFLSYMCIKENMYVTLATSICTYILTSMLQ-KKSPIPVFIMTFTVLVS 105
Query: 560 LLLCEIYVLNPKMWQQ--IRGIQMIAAMKIISVAIELDRNIYNNILNPVEYGGYIFCPAN 733
L + ++ +P W+ + +I I D I + I N +EY GY++ +
Sbjct: 106 LHIHR-FIYDPMGWKMDGTTSLMLIICKNIYFSTYVADGRI-SKIPNLLEYLGYVYFYPS 163
Query: 734 CILGPWMSFQSYNKSLEVR 790
I+GP +F Y+ +++R
Sbjct: 164 AIIGPAFNFNIYSDFIQLR 182
>UniRef50_Q96MW6 Cluster: CDNA FLJ31778 fis, clone NT2RI2008188,
highly similar to Mus musculus Mporc-b porcupine-B; n=1;
Homo sapiens|Rep: CDNA FLJ31778 fis, clone NT2RI2008188,
highly similar to Mus musculus Mporc-b porcupine-B -
Homo sapiens (Human)
Length = 340
Score = 48.8 bits (111), Expect = 3e-04
Identities = 31/115 (26%), Positives = 59/115 (51%)
Frame = +2
Query: 272 LSMCTEPTVYEGLKXAKDILFSNLLLRFTIQFLPLPHNVRHSLSLITGVYLLYNNIGSAI 451
L C PT +GL +L L R + L LP ++H+ ++ G + LY+ +
Sbjct: 127 LQGCLLPTAQQGLDQIWLLLAICLACRLLWR-LGLPSYLKHASTVAGGFFSLYHFFQLHM 185
Query: 452 FWTIGLTTGSYTMITVLSWTKSKRRSLFVSFTIITFLLLCEIYVLNPKMWQQIRG 616
W + L+ Y ++ + S R +F+S TI+ +LL+ E+++++ W ++RG
Sbjct: 186 VWVVLLSLLCYLVLFLCR--HSSHRGVFLSVTILIYLLMGEMHMVDTVTWHKMRG 238
>UniRef50_A6F3Z3 Cluster: GGDEF domain/EAL domain protein; n=1;
Marinobacter algicola DG893|Rep: GGDEF domain/EAL domain
protein - Marinobacter algicola DG893
Length = 544
Score = 41.9 bits (94), Expect = 0.032
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Frame = +2
Query: 344 LLRFTIQFLPLPHNVR---HSLSLITGVYLLYN-----NIGSAIFWTIGLTTGSYTMITV 499
L FT FLPL H R H +SL+ ++LL +G A F + L G + ++ V
Sbjct: 148 LCEFTPHFLPLGHRSRRIIHVISLLAFLHLLATPMSIPGVGEASFLALALAGGGFILLVV 207
Query: 500 LSWTKSKRRSLFVSFTIITFLLLCEIYVLNPKMW 601
LS + + + I+ L+ I L+ K W
Sbjct: 208 LSLVRQHVHARYYGLAILAILIGTVISFLHTKGW 241
>UniRef50_UPI00004996F6 Cluster: conserved hypothetical protein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 473
Score = 41.1 bits (92), Expect = 0.057
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 22/170 (12%)
Frame = +2
Query: 332 FSNLLLRFTIQFLPLPHNVRHSLSLITGVYLLYN--NIGSAIFWTIGLTTGSYTMITVLS 505
F L L + +++LP ++H + I GV +L I S I GL T Y M
Sbjct: 26 FIELPLCYILRYLPSNPRLKHFVYSIIGVIILLFVFGINSMIIIIPGLIT-YYAM----K 80
Query: 506 WTKSKRRSLFVSFTIITFLLLCEI--YVLNPKMWQ-QIRGIQMIAAMKIISVAIEL---- 664
W KS + F+ + FL L +I Y+ W I +QMI +K+ + A +
Sbjct: 81 WKKSLHAAFFIFSLNLMFLTLLQIHKYINYYLQWYLDITTLQMIVVIKLGNFAFNVAKGS 140
Query: 665 --------DRNIYNNILNP-----VEYGGYIFCPANCILGPWMSFQSYNK 775
D N NNI N +E+ GY + + GP + +Q+Y K
Sbjct: 141 NTNTIKQTDYNKMNNIPNDQFPSLLEFIGYFYFFPSIFSGPCIEYQTYKK 190
>UniRef50_Q22329 Cluster: More of ms protein 1; n=2;
Caenorhabditis|Rep: More of ms protein 1 -
Caenorhabditis elegans
Length = 442
Score = 37.5 bits (83), Expect = 0.70
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 608 IRGIQMIAAMKIISVAIELDRNIYNNI--LNPVEYGGYIFCPANCILGPWMSFQSYNK 775
IRGI MI M++ +VA L++ N + Y YI+ P I GP++SF+ + K
Sbjct: 129 IRGILMIHIMRLTTVAFNLEKANSNKFRFVQFSSYVEYIYFPPFIIFGPYLSFEQFFK 186
>UniRef50_Q9K9R7 Cluster: BH2578 protein; n=1; Bacillus
halodurans|Rep: BH2578 protein - Bacillus halodurans
Length = 128
Score = 35.5 bits (78), Expect = 2.8
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +2
Query: 491 ITVLSWTKSKRRSLFVSFTIITFLLLCEIYVLNPKMWQQIRGIQMIAAMKIISV 652
I V+ WTK+KRRS+ ++ T L + +Y + MW + ++A +I++
Sbjct: 25 IVVVKWTKNKRRSVRLASDFSTLLFMLGVYFILKSMWTNMSIWVILAVFFLIAM 78
>UniRef50_A2DJP8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 805
Score = 34.7 bits (76), Expect = 4.9
Identities = 14/63 (22%), Positives = 31/63 (49%)
Frame = +2
Query: 410 TGVYLLYNNIGSAIFWTIGLTTGSYTMITVLSWTKSKRRSLFVSFTIITFLLLCEIYVLN 589
TG++L I +FW++G+ +T++ + + T S + +F +I ++ +
Sbjct: 471 TGIFLFAEFISINVFWSVGVLFYKFTVMAMSTLTSSVNKYIFTCMPVIYLIMFIIVVKRR 530
Query: 590 PKM 598
P M
Sbjct: 531 PHM 533
>UniRef50_O59785 Cluster: Membrane transporter; n=1;
Schizosaccharomyces pombe|Rep: Membrane transporter -
Schizosaccharomyces pombe (Fission yeast)
Length = 505
Score = 34.7 bits (76), Expect = 4.9
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +2
Query: 476 GSYTMITVLSWTKSKRRSLFVSFTIITFLLLCEIYVLNPKMWQQIRG-IQMIAAMKIISV 652
G+Y ++ +T SL S+ + ++L I++ W QI G + I + ++ V
Sbjct: 221 GNYFVVLAYQYTNMLSASLLDSWATVAVVILSFIFLKVRYHWSQILGVVACIGGLVLLVV 280
Query: 653 AIELDRNIYNNILNPVEYGGYIFCPANC 736
+ + R Y+ + NP GY+ A C
Sbjct: 281 SDVISRGDYSAV-NPGLGDGYMIIGATC 307
>UniRef50_Q1M9M6 Cluster: Putative uncharacterized protein; n=1;
Rhizobium leguminosarum bv. viciae 3841|Rep: Putative
uncharacterized protein - Rhizobium leguminosarum bv.
viciae (strain 3841)
Length = 124
Score = 34.3 bits (75), Expect = 6.5
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 545 TIITFLLLCEIY-VLNPKMWQQIRGIQMIAAMKIISVAIELDRNI 676
TI+TF +++ V++PK W+ I +Q I I VA LDR+I
Sbjct: 39 TILTFSSPAQLFSVISPKRWELIEQLQKIGPSSIRGVARALDRDI 83
>UniRef50_Q11VC6 Cluster: Possible integral membrane protein; n=1;
Cytophaga hutchinsonii ATCC 33406|Rep: Possible integral
membrane protein - Cytophaga hutchinsonii (strain ATCC
33406 / NCIMB 9469)
Length = 221
Score = 34.3 bits (75), Expect = 6.5
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 413 GVYLLYNNIGSAIFWTIGLTTGSYTMITVLSWTKSKRRSLFVSFTIITFLLLCEIYV 583
G +LLYN IG + W + L G Y + V+ +K + + IIT++ + Y+
Sbjct: 146 GKFLLYNIIGGTL-WVVSLVYGGYLLGQVVPESKDYLEHIILGIIIITWIPVVVTYI 201
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 965,183,500
Number of Sequences: 1657284
Number of extensions: 18360058
Number of successful extensions: 46543
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 44186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46517
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 123505711495
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -