Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_D15
(1228 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 26 0.50
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 26 0.50
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 1.5
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 1.5
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 1.5
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 1.5
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 24 2.7
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 24 2.7
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 23 3.5
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 22 8.2
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 22 8.2
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 26.2 bits (55), Expect = 0.50
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 588 FKTYISHNRRNVIIVNDTNSDLLLLLV 508
FKT N N+ +VN + +DL++LLV
Sbjct: 94 FKTKDMRNSTNIFLVNLSVADLMVLLV 120
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 26.2 bits (55), Expect = 0.50
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 588 FKTYISHNRRNVIIVNDTNSDLLLLLV 508
FKT N N+ +VN + +DL++LLV
Sbjct: 94 FKTKDMRNSTNIFLVNLSVADLMVLLV 120
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 1.5
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -2
Query: 219 FFRTQSFPVFLNFL*VFMT-TFHVV 148
FF++ P F +FL VF T T H V
Sbjct: 155 FFKSSKKPAFSHFLIVFFTETLHTV 179
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 1.5
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -2
Query: 219 FFRTQSFPVFLNFL*VFMT-TFHVV 148
FF++ P F +FL VF T T H V
Sbjct: 155 FFKSSKKPAFSHFLIVFFTETLHTV 179
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 24.6 bits (51), Expect = 1.5
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -2
Query: 219 FFRTQSFPVFLNFL*VFMT-TFHVV 148
FF++ P F +FL VF T T H V
Sbjct: 155 FFKSSKKPAFSHFLIVFFTETLHTV 179
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 24.6 bits (51), Expect = 1.5
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -2
Query: 219 FFRTQSFPVFLNFL*VFMT-TFHVV 148
FF++ P F +FL VF T T H V
Sbjct: 155 FFKSSKKPAFSHFLIVFFTETLHTV 179
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 23.8 bits (49), Expect = 2.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 602 QQIRGIQMIAAMKIISVAIELDRNIYNNILNPVEYGG 712
QQI + + I ++ + L+ N YN N EYGG
Sbjct: 38 QQIIDVDEKNQLLITNIWLSLEWNDYNLKWNESEYGG 74
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 23.8 bits (49), Expect = 2.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 602 QQIRGIQMIAAMKIISVAIELDRNIYNNILNPVEYGG 712
QQI + + I ++ + L+ N YN N EYGG
Sbjct: 38 QQIIDVDEKNQLLITNIWLSLEWNDYNLKWNESEYGG 74
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 23.4 bits (48), Expect = 3.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 533 FVSFTIITFLLLCEIYVLNPKMWQQIRGIQMIAAMKIIS 649
FV F I+T + + L+P QIR I +A + I+
Sbjct: 46 FVIFIILTIVFFEKRSALSPFELIQIRTINFVATFRTIA 84
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 22.2 bits (45), Expect = 8.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 731 NCILGPWMSFQSYNKSLEVRFLCKRW 808
N L P S SY K L V F + W
Sbjct: 721 NSPLFPLESATSYQKKLTVDFSAREW 746
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 22.2 bits (45), Expect = 8.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 660 NWIEIYTITSSTQLNMEVIFFALQIAFLA 746
NW+ I S+ L ++ FALQ+ A
Sbjct: 600 NWVSKLIIRSNPSLEEKLQIFALQLTHRA 628
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,162
Number of Sequences: 336
Number of extensions: 5479
Number of successful extensions: 29
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35863589
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -