Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_D15
         (1228 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    27   0.85 
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   4.5  
EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.        24   7.9  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 27.5 bits (58), Expect = 0.85
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = +2

Query: 203 LCVLKKXDKMDAEDVYAENTWTYLSMCTEPTVYEGLKXAKDILFSNLLLRFTI 361
           L +    + +D  D +   TW  + +     VYEG     DI F  ++ R T+
Sbjct: 181 LALYNNKNFVDLSDYWKSGTWDIIEVPAYLNVYEGNPTETDITFYIIIRRKTL 233


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.0 bits (52), Expect = 4.5
 Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
 Frame = +2

Query: 548 IITFLLLCEIYVLNPKMWQQI------RGIQMIAAMKIISVAIELDRNIYNNILNPVEYG 709
           ++  L +C  +  N   WQ I      +G+   A + II    E  + IYN    PVE  
Sbjct: 579 MVVALDICNAF--NTASWQSIADALRNKGVPS-ALLNIIGSYFEERKLIYNTSAGPVERH 635

Query: 710 GYIFCPANCILGPWMSFQSYNKSLEV 787
                P   ILGP +    Y+  L V
Sbjct: 636 ISAGVPQESILGPTLWNVMYDGVLGV 661


>EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.
          Length = 421

 Score = 24.2 bits (50), Expect = 7.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 293 LVLYT*IGTSKYFRRTHLLHPSCXI 219
           L+L   IGT + FRR HL H S  +
Sbjct: 15  LMLLISIGTVQPFRRHHLRHQSSFV 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,050,873
Number of Sequences: 2352
Number of extensions: 20354
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 139791474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)