Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_D14
(1230 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0282 - 16236659-16236728,16236822-16236889,16238212-162382... 129 5e-30
03_05_0166 - 21438681-21438750,21438832-21438899,21440260-214403... 129 5e-30
08_02_0728 + 20461724-20461758,20462227-20462298,20462792-204628... 66 4e-11
07_03_0281 - 16221526-16221624,16221935-16221986,16222071-162221... 36 0.049
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 32 0.80
01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225 30 3.9
10_08_0451 + 18033065-18033253,18033746-18033805,18034256-180343... 30 4.3
02_05_0962 + 33114226-33114684,33114806-33114853,33115166-331152... 30 4.3
02_05_0002 - 24849189-24849825,24850267-24850328 30 4.3
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 29 7.5
01_01_0401 + 3043634-3043894,3045610-3045849 29 7.5
01_01_0083 + 631196-631675 29 9.9
>07_03_0282 -
16236659-16236728,16236822-16236889,16238212-16238263,
16238357-16238526,16238611-16238644,16239197-16239206,
16239644-16239749
Length = 169
Score = 129 bits (311), Expect = 5e-30
Identities = 60/77 (77%), Positives = 68/77 (88%)
Frame = +3
Query: 288 RITTRYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKHGKIPIIIRRYL 467
R T++YMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ KIP IRRYL
Sbjct: 84 RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYL 143
Query: 468 PDHSYEDWSIDELIIID 518
PD SYEDW +DELI+ D
Sbjct: 144 PDGSYEDWGVDELIVED 160
>03_05_0166 -
21438681-21438750,21438832-21438899,21440260-21440311,
21440405-21440574,21440652-21440685,21441991-21442025
Length = 142
Score = 129 bits (311), Expect = 5e-30
Identities = 60/77 (77%), Positives = 68/77 (88%)
Frame = +3
Query: 288 RITTRYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKHGKIPIIIRRYL 467
R T++YMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+ KIP IRRYL
Sbjct: 57 RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYL 116
Query: 468 PDHSYEDWSIDELIIID 518
PD SYEDW +DELI+ D
Sbjct: 117 PDGSYEDWGVDELIVED 133
>08_02_0728 +
20461724-20461758,20462227-20462298,20462792-20462825,
20462874-20463079,20463173-20463224,20463325-20463438,
20463521-20463574,20464464-20464538,20464645-20464749
Length = 248
Score = 66.5 bits (155), Expect = 4e-11
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = +3
Query: 294 TTRYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKHGKIP 446
T++YMTKYERAR+L TRALQI+M APVMVELEG T PL++ E + P
Sbjct: 95 TSKYMTKYERARILSTRALQISMNAPVMVELEGGTYPLEVEALERVYTDCP 145
>07_03_0281 -
16221526-16221624,16221935-16221986,16222071-16222165,
16222347-16222398,16222483-16222611,16222748-16222812
Length = 163
Score = 36.3 bits (80), Expect = 0.049
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +3
Query: 345 ALQIAMCAPVMVELEGETDPLQ 410
ALQI+M A VMVEL+GETDPL+
Sbjct: 61 ALQISMNALVMVELDGETDPLE 82
Score = 36.3 bits (80), Expect = 0.049
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +3
Query: 345 ALQIAMCAPVMVELEGETDPLQ 410
ALQI+M A VMVEL+GETDPL+
Sbjct: 110 ALQISMNALVMVELDGETDPLE 131
>07_03_1691 - 28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 32.3 bits (70), Expect = 0.80
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 1126 PXXXGGGGGXXXXXXPPPPPP 1064
P GGGGG PPPPPP
Sbjct: 31 PSCGGGGGGAGPTPPPPPPPP 51
Score = 32.3 bits (70), Expect = 0.80
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 1125 PXXGGGGGXXXXXXXPPPPPP 1063
P GGGGG PPPPPP
Sbjct: 31 PSCGGGGGGAGPTPPPPPPPP 51
Score = 30.3 bits (65), Expect = 3.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 1065 GGGGGGXXXXXXPPPPP 1115
GGGGGG PPPPP
Sbjct: 34 GGGGGGAGPTPPPPPPP 50
Score = 30.3 bits (65), Expect = 3.2
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 1066 GGGGGGXXXXXXPPPPP 1116
GGGGGG PPPPP
Sbjct: 34 GGGGGGAGPTPPPPPPP 50
Score = 28.7 bits (61), Expect = 9.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 1126 PXXXGGGGGXXXXXXPPPPPP 1064
P GGGG PPPPPP
Sbjct: 29 PIPSCGGGGGGAGPTPPPPPP 49
>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
Length = 467
Score = 29.9 bits (64), Expect = 4.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 1064 GGGGGGXXXXXXXPPPPP 1117
GGGGGG PPPPP
Sbjct: 23 GGGGGGFSPTAAKPPPPP 40
Score = 27.5 bits (58), Expect(2) = 3.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 1116 GGGGGXXXXXXXPPPPP 1066
GGGGG PPPPP
Sbjct: 24 GGGGGFSPTAAKPPPPP 40
Score = 21.0 bits (42), Expect(2) = 3.9
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1
Query: 1080 PPPPPP 1063
PPPPPP
Sbjct: 58 PPPPPP 63
>10_08_0451 + 18033065-18033253,18033746-18033805,18034256-18034324,
18034751-18034786,18035081-18035146,18035345-18035443,
18035543-18035620,18035724-18035802,18035999-18036093,
18036251-18036335,18036505-18036698,18036804-18036922,
18037015-18037057
Length = 403
Score = 29.9 bits (64), Expect = 4.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 1064 GGGGGGXXXXXXXPPPPP 1117
GGGGGG PPPPP
Sbjct: 23 GGGGGGMGSPPLGPPPPP 40
>02_05_0962 + 33114226-33114684,33114806-33114853,33115166-33115286,
33115760-33116008,33116149-33116302,33116493-33116985,
33117524-33117596,33118285-33118343
Length = 551
Score = 29.9 bits (64), Expect = 4.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 1064 GGGGGGXXXXXXXPPPPP 1117
GGGGGG PPPPP
Sbjct: 55 GGGGGGFLRLRSAPPPPP 72
>02_05_0002 - 24849189-24849825,24850267-24850328
Length = 232
Score = 29.9 bits (64), Expect = 4.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 1126 PXXXGGGGGXXXXXXPPPPPP 1064
P GGGG PPPPPP
Sbjct: 206 PADTSGGGGHPHPPPPPPPPP 226
>01_07_0188 - 41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 29.1 bits (62), Expect = 7.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 1127 PXXXGGGGGXXXXXXPPPPPP 1065
P GGGGG PPP PP
Sbjct: 20 PPQAGGGGGGEFYRGPPPQPP 40
>01_01_0401 + 3043634-3043894,3045610-3045849
Length = 166
Score = 29.1 bits (62), Expect = 7.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 1126 PXXXGGGGGXXXXXXPPPPPP 1064
P GGGGG PPP PP
Sbjct: 19 PPGGGGGGGKKLHQSPPPSPP 39
Score = 29.1 bits (62), Expect = 7.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 1125 PXXGGGGGXXXXXXXPPPPPP 1063
P GGGGG PPP PP
Sbjct: 19 PPGGGGGGGKKLHQSPPPSPP 39
>01_01_0083 + 631196-631675
Length = 159
Score = 28.7 bits (61), Expect = 9.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 1126 PXXXGGGGGXXXXXXPPPPPP 1064
P GGGGG PPPP P
Sbjct: 94 PAGGGGGGGGFNYPAPPPPNP 114
Score = 28.7 bits (61), Expect = 9.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 1125 PXXGGGGGXXXXXXXPPPPPP 1063
P GGGGG PPPP P
Sbjct: 94 PAGGGGGGGGFNYPAPPPPNP 114
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,357,911
Number of Sequences: 37544
Number of extensions: 488147
Number of successful extensions: 9493
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6025
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3782886900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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