Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_D08
(1206 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908 195 7e-50
10_08_0999 + 22121029-22121235,22121819-22122082,22122123-221223... 140 2e-33
01_01_1205 - 9693702-9694517,9694591-9695076,9697014-9697095,969... 127 2e-29
03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328 122 4e-28
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 118 7e-27
07_01_0579 + 4299104-4299652,4300845-4300935,4301018-4301211,430... 97 2e-20
12_01_0297 - 2244793-2244945,2245337-2245396,2245529-2245628,224... 96 6e-20
11_01_0296 - 2222329-2222481,2222777-2222836,2222965-2223064,222... 94 2e-19
11_01_0724 + 5981680-5981748,5982301-5982397,5982496-5982593,598... 82 7e-16
03_05_0640 - 26326832-26327166,26327295-26327529,26327665-263279... 46 6e-05
02_01_0510 + 3703715-3705040 30 3.2
02_02_0168 + 7364410-7365153 30 4.2
08_02_1064 - 24033941-24034127,24034432-24034476,24035355-240354... 29 5.5
07_01_0989 + 8348706-8348882,8348988-8349028,8350071-8350120,835... 29 7.3
05_05_0050 + 21916020-21916489,21916906-21917380,21917472-21918278 29 7.3
10_08_0625 + 19362303-19363853 29 9.7
>04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908
Length = 511
Score = 195 bits (475), Expect = 7e-50
Identities = 106/222 (47%), Positives = 141/222 (63%), Gaps = 3/222 (1%)
Frame = +2
Query: 296 ICTXGPASRNVAVLXXXMEXGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPFS 475
+CT GPASR+V +L + GMNVAR NFSHG+HEYH ET+ N R+A + +
Sbjct: 26 VCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYHQETLDNLRQAMHN------TGVL 79
Query: 476 LAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITNV 655
A+ LDTKGPEIRTG L+ G ++L KG+ +LT ++DY+ KG+ + I + YK +
Sbjct: 80 CAVMLDTKGPEIRTGFLKDG--KPIKLTKGQ--ELTVTTDYEIKGDENMITMSYKKLPVD 135
Query: 656 VKPGNRIFIDDGLISIICQSV--SADTLTCTIENGGMLGSRKGVNLPGIPVDLPAVSEKD 829
VKPGN I DG IS+ S A T+ C EN MLG RK NLPGI VDLP ++EKD
Sbjct: 136 VKPGNVILCADGTISLTVLSCDPKAGTVRCRCENTAMLGERKNCNLPGIVVDLPTLTEKD 195
Query: 830 KSDLL-FGVEQGVDMIFASFIRNGAXLHEIRGILGEKGKNIR 952
K D+L +GV +DMI SF+R G+ L +R +LG+ K I+
Sbjct: 196 KEDILGWGVPNDIDMIALSFVRKGSDLVTVRQLLGQHAKRIK 237
Score = 49.2 bits (112), Expect = 6e-06
Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +1
Query: 949 QIISKXENHQGMVN*NXIIXESDGIMVARGXLGIXIPXKR-YPXPKNMIAKC 1101
+++SK EN +G+VN + I+ E+D MVARG LG+ IP ++ + K MI KC
Sbjct: 237 KLMSKVENQEGVVNFDEILRETDAFMVARGDLGMEIPVEKIFLAQKMMIYKC 288
>10_08_0999 +
22121029-22121235,22121819-22122082,22122123-22122324,
22122456-22122590,22122668-22122778,22122871-22122959,
22123237-22123299,22123461-22123636,22123785-22123887,
22124286-22124461,22124625-22124733,22124851-22124943,
22126294-22126435,22126655-22126671
Length = 628
Score = 140 bits (339), Expect = 2e-33
Identities = 81/236 (34%), Positives = 130/236 (55%), Gaps = 8/236 (3%)
Frame = +2
Query: 281 RLSGXICTXGPASRNVAVLXXXMEXGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKL 460
R + +CT GP++ ++ E GMNVARMN SHG H+ H + I + K Y+AK
Sbjct: 89 RKTKIVCTIGPSTNTREMIWKLAETGMNVARMNMSHGDHQSHQKVI----DLVKEYNAKN 144
Query: 461 GSPFSLAIALDTK--GPEIRTGLLEG-----GGSAE-VELKKGETIKLTTSSDYQEKGNA 616
+AI LDTK + RT +++G G E + L++G+ T K
Sbjct: 145 TDGNVIAIMLDTKQMSCDDRTSVMQGPEVRSGDVPEPIMLEEGQEFNFTIKRGVSTK--- 201
Query: 617 DTIYVDYKNITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENGGMLGSRKGVNLPGI 796
DT+ V+Y + N V+ G+ + +D G++S+ +S +ADT+ C + +GG L SR+ +N+ G
Sbjct: 202 DTVSVNYDDFINDVEVGDILLVDGGMMSLAVKSKTADTVKCEVVDGGELKSRRHLNVRGK 261
Query: 797 PVDLPAVSEKDKSDLLFGVEQGVDMIFASFIRNGAXLHEIRGILGEKGKNIRSSPR 964
LP+++EKD D+ FGVE GVD SF+++ +HE++ L +I P+
Sbjct: 262 SATLPSITEKDWEDIKFGVENGVDFYAVSFVKDAKVIHELKDYLKSANADIHVIPK 317
Score = 37.5 bits (83), Expect = 0.021
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 952 IISKXENHQGMVN*NXIIXESDGIMVARGXLGIXIPXKRYP-XPKNMIAKCXGLE 1113
+I K E+ + N II SDG MVARG LG +P + P + ++ C ++
Sbjct: 314 VIPKIESADSIPNLQSIIAASDGAMVARGDLGAELPIEEVPLLQEEIVRTCRSMQ 368
>01_01_1205 -
9693702-9694517,9694591-9695076,9697014-9697095,
9697876-9698051,9698326-9698580
Length = 604
Score = 127 bits (307), Expect = 2e-29
Identities = 71/157 (45%), Positives = 98/157 (62%), Gaps = 3/157 (1%)
Frame = +2
Query: 488 LDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPG 667
L +GPEIRTG L+ G V+LKKG+ I T S+DY KG+ + I + YK + +KPG
Sbjct: 176 LKIQGPEIRTGFLKDG--KPVQLKKGQEI--TVSTDYSIKGDDNMISMSYKKLAVDLKPG 231
Query: 668 NRIFIDDGLISIICQSVSADT--LTCTIENGGMLGSRKGVNLPGIPVDLPAVSEKDKSDL 841
+ I DG I++ + + C EN MLG RK VNLPG+ VDLP ++EKDK D+
Sbjct: 232 SVILCADGTITLTVLHCDKEQGLVRCRCENTAMLGERKNVNLPGVIVDLPTLTEKDKEDI 291
Query: 842 L-FGVEQGVDMIFASFIRNGAXLHEIRGILGEKGKNI 949
L +GV +DMI SF+R G+ L E+R +LG+ K+I
Sbjct: 292 LKWGVPNKIDMIALSFVRKGSDLVEVRKVLGKHAKSI 328
Score = 69.7 bits (163), Expect = 4e-12
Identities = 36/77 (46%), Positives = 47/77 (61%)
Frame = +2
Query: 296 ICTXGPASRNVAVLXXXMEXGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPFS 475
+CT GPASR+V ++ + GM VAR NFSHGSHEYH ET+ N R A +S +
Sbjct: 24 VCTLGPASRSVEMIGRLLRAGMCVARFNFSHGSHEYHQETLDNLRAAMES------TGIL 77
Query: 476 LAIALDTKGPEIRTGLL 526
A+ LDTK + G+L
Sbjct: 78 CAVMLDTKARDFVLGVL 94
Score = 46.8 bits (106), Expect = 3e-05
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +1
Query: 952 IISKXENHQGMVN*NXIIXESDGIMVARGXLGIXIPXKR-YPXPKNMIAKC 1101
++SK EN +G+ N + I+ +SD MVARG LG+ IP ++ + K MI KC
Sbjct: 330 LMSKVENQEGVANFDDILAQSDAFMVARGDLGMEIPIEKIFYAQKVMIFKC 380
>03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328
Length = 448
Score = 122 bits (295), Expect = 4e-28
Identities = 67/153 (43%), Positives = 94/153 (61%), Gaps = 3/153 (1%)
Frame = +2
Query: 500 GPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPGNRIF 679
GPEIRTG L+ G ++LK+G+ I +T DY KG+ + I + Y + +KPG+ I
Sbjct: 71 GPEIRTGFLKDG--KPIQLKQGKEITITI--DYSIKGDENLISMSYHKLAIDLKPGSTIL 126
Query: 680 IDDGLISIICQSVSADT--LTCTIENGGMLGSRKGVNLPGIPVDLPAVSEKDKSDLL-FG 850
DG I++ S + + C EN MLG RK VNLPG+ VDLP ++EKDK D+L +G
Sbjct: 127 CADGTITLTVLSCDCEQGLVRCRCENSAMLGERKNVNLPGVIVDLPTLTEKDKVDILQWG 186
Query: 851 VEQGVDMIFASFIRNGAXLHEIRGILGEKGKNI 949
V +DMI SF+R G+ L +R +LGE K+I
Sbjct: 187 VPNKIDMIALSFVRKGSDLMLVRSVLGEHAKSI 219
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 118 bits (285), Expect = 7e-27
Identities = 75/245 (30%), Positives = 127/245 (51%), Gaps = 16/245 (6%)
Frame = +2
Query: 263 SKSSYIRLSGXICTXGPASRNVAVLXXXMEXGMNVARMNFSHGSHEYHAETIRNCREAEK 442
SK + R + +CT GP++ ++ E GMNVAR+N SHG H H + I + K
Sbjct: 108 SKPNVRRKTKIVCTIGPSTNTKEMIWKLAEAGMNVARLNMSHGDHASHQKVI----DLVK 163
Query: 443 SYSAKLGSPFSLAIALDTKG-PEIRTGLLE-------GGGSAEVELKKGET---IKLTTS 589
Y+A+ +AI LDTK E +LE G E++ G+ I L T
Sbjct: 164 EYNAQTKDNV-IAIMLDTKSYTEYDVLMLECFFAVYASSGGIGPEVRSGDLPQPIMLETG 222
Query: 590 SDY-----QEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENG 754
++ + G + V+Y + N V+ G+ + +D G++S++ +S + D++ C + +G
Sbjct: 223 QEFTFTIKRGVGTETCVSVNYDDFVNDVEVGDMLLVDGGMMSLLVKSKTEDSVKCEVIDG 282
Query: 755 GMLGSRKGVNLPGIPVDLPAVSEKDKSDLLFGVEQGVDMIFASFIRNGAXLHEIRGILGE 934
G L SR+ +N+ G LP++++KD D+ FGVE VD SF+++ +HE++ L
Sbjct: 283 GELKSRRHLNVRGKSATLPSITDKDWDDIKFGVENQVDYYAVSFVKDAQVVHELKDYLRS 342
Query: 935 KGKNI 949
+I
Sbjct: 343 SNADI 347
Score = 37.1 bits (82), Expect = 0.028
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 952 IISKXENHQGMVN*NXIIXESDGIMVARGXLGIXIPXKRYP-XPKNMIAKCXGL 1110
+I K E+ + N + II SDG MVARG LG +P + P + +I C +
Sbjct: 349 VIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRMCRSM 402
>07_01_0579 +
4299104-4299652,4300845-4300935,4301018-4301211,
4301501-4301622,4302378-4302856,4303033-4303334
Length = 578
Score = 97.1 bits (231), Expect = 2e-20
Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 7/228 (3%)
Frame = +2
Query: 281 RLSGXICTXGPASRNVAVLXXXMEXGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKL 460
R + +CT GPA+ L GMNVAR+N HG E+H IR R +
Sbjct: 99 RRTKLVCTVGPATCGADELEALAVGGMNVARVNMCHGDREWHRGVIRAVRRLNEE----- 153
Query: 461 GSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYK 640
F++A+ +DT+G EI G L GG+A + + GE + S ++ TI+V+Y+
Sbjct: 154 -KGFAVAVMMDTEGSEIHMGDL--GGAAAAKAEDGEIWTFSVRS-FEAPPPERTIHVNYE 209
Query: 641 NITNVVKPGNRIFIDDGLISIICQSVSADTLTCTIENGGMLGSRKGVNL--PGIPVD--- 805
V+ G+ + +D G+ + C + G+L R + G V
Sbjct: 210 GFAEDVRVGDELLVDGGMARFEVVEKLGPDVKCRCTDPGLLLPRANLTFWRDGSIVRERN 269
Query: 806 --LPAVSEKDKSDLLFGVEQGVDMIFASFIRNGAXLHEIRGILGEKGK 943
LP +S KD D+ FG+ +GVD I SF+++ ++ ++ + + +
Sbjct: 270 AMLPTISSKDWLDIDFGISEGVDFIAVSFVKSAEVINHLKSYIAARSR 317
Score = 42.7 bits (96), Expect = 6e-04
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +1
Query: 934 KGEEHQIISKXENHQGMVN*NXIIXESDGIMVARGXLGIXIPXKRYPXPKNMIAK 1098
+G + +I+K E+ + N II SDG MVARG +G IP ++ P + I K
Sbjct: 317 RGSDIAVIAKIESIDSLKNLEEIIRASDGAMVARGDMGAQIPLEQVPSVQQKIVK 371
>12_01_0297 -
2244793-2244945,2245337-2245396,2245529-2245628,
2245712-2245779,2245922-2246017,2246156-2246244,
2246320-2246464,2246643-2246732,2246816-2246887,
2247052-2247132,2247361-2247492,2247613-2247690,
2247930-2248085,2248227-2248324,2248418-2248499
Length = 499
Score = 95.9 bits (228), Expect = 6e-20
Identities = 66/223 (29%), Positives = 114/223 (51%), Gaps = 10/223 (4%)
Frame = +2
Query: 302 TXGPASRNVAVLXXXMEXGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPFSLA 481
T GP SR+V + ++ GM+VAR +FS G EYH ET+ N + A KS + KL A
Sbjct: 7 TLGPKSRSVDTISSCLKAGMSVARFDFSWGDAEYHQETLENLKVAIKS-TKKL-----CA 60
Query: 482 IALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITNVVK 661
+ LDT GPE++ + A + L++ T+ LT D ++ ++ + +++ + VK
Sbjct: 61 VMLDTVGPELQ---VVNKSEASISLEENGTVILT--PDQGQEASSQVLPINFAGLAKAVK 115
Query: 662 PGNRIFIDDGLIS--------IICQSVSADTLTCTIENGGML-GSRKGVNLPGIPVDLPA 814
PG+ IF+ L + + + D + C I+N L GS ++ I +DLP
Sbjct: 116 PGDTIFVGQYLFTGSETTSVWLEVSQIKGDDVVCVIKNTATLAGSLFTLHCSQIHIDLPT 175
Query: 815 VSEKDKSDL-LFGVEQGVDMIFASFIRNGAXLHEIRGILGEKG 940
+S++DK + +G +D + S+ R+ + + R L + G
Sbjct: 176 LSDEDKEVIRKWGAPNKIDFLSLSYTRHVEDVRQAREFLSKLG 218
Score = 44.8 bits (101), Expect = 1e-04
Identities = 21/52 (40%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +1
Query: 949 QIISKXENHQGMVN*NXIIXESDGIMVARGXLGIXIPXKR-YPXPKNMIAKC 1101
QI +K EN +G+ N + I+ E+DGI+++RG LGI +P ++ + K+ + KC
Sbjct: 224 QIFAKIENVEGLNNFDEILQEADGIILSRGNLGIDLPPEKVFLFQKSALHKC 275
>11_01_0296 -
2222329-2222481,2222777-2222836,2222965-2223064,
2223152-2223219,2223369-2223464,2223603-2223691,
2223762-2223906,2224100-2224189,2224271-2224342,
2224543-2224623,2224766-2224897,2225026-2225103,
2225280-2225435,2225521-2225618,2225712-2225793
Length = 499
Score = 94.3 bits (224), Expect = 2e-19
Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 10/223 (4%)
Frame = +2
Query: 302 TXGPASRNVAVLXXXMEXGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPFSLA 481
T GP SR V + ++ GM+VAR +FS G EYH ET+ N + A KS + KL A
Sbjct: 7 TLGPKSRAVDTISSCLKAGMSVARFDFSWGDAEYHQETLENLKLAIKS-TKKL-----CA 60
Query: 482 IALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKNITNVVK 661
+ LDT GPE++ + A + L+ T+ LT D ++ +++ + +++ + +K
Sbjct: 61 VMLDTVGPELQ---VVNKSEAAISLEANGTVVLT--PDQGQEASSELLPINFSGLAKALK 115
Query: 662 PGNRIFIDDGLIS--------IICQSVSADTLTCTIENGGML-GSRKGVNLPGIPVDLPA 814
PG IF+ L + + V D + C I+N L GS ++ I +DLP
Sbjct: 116 PGATIFVGQYLFTGSETTSVWLEVSEVKGDDVVCVIKNSATLAGSLFTLHCSQIHIDLPT 175
Query: 815 VSEKDKSDL-LFGVEQGVDMIFASFIRNGAXLHEIRGILGEKG 940
+S++DK + +G +D + S+ R+ + + R L + G
Sbjct: 176 LSDEDKEVIRRWGAPNKIDFLSLSYTRHAEDVRQAREFLSKLG 218
Score = 42.7 bits (96), Expect = 6e-04
Identities = 20/52 (38%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +1
Query: 949 QIISKXENHQGMVN*NXIIXESDGIMVARGXLGIXIPXKR-YPXPKNMIAKC 1101
QI +K EN +G+ + + I+ E+DGI+++RG LGI +P ++ + K+ + KC
Sbjct: 224 QIFAKIENVEGLNHFDEILQEADGIILSRGNLGIDLPPEKVFLFQKSALHKC 275
>11_01_0724 +
5981680-5981748,5982301-5982397,5982496-5982593,
5983535-5983690,5983986-5984063,5984135-5984266,
5984856-5984936,5985442-5985510,5985597-5985686,
5986001-5986145,5986218-5986276,5986384-5986479,
5986561-5986628,5986704-5986803,5986910-5986966,
5987179-5987337
Length = 517
Score = 82.2 bits (194), Expect = 7e-16
Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 10/229 (4%)
Frame = +2
Query: 284 LSGXICTXGPASRNVAVLXXXMEXGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLG 463
L+ + T GP S +V V+ + GM VAR +FS YH ET+ N R+A ++ + KL
Sbjct: 29 LTKIVGTLGPNSHSVEVIQECLTAGMAVARFDFSWMDASYHQETLNNLRKAAQNVN-KL- 86
Query: 464 SPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTIYVDYKN 643
+ LDT GPEI+ GG +ELK G + +T D + +++ + + +
Sbjct: 87 ----CPVMLDTLGPEIQVHNSTGG---PIELKAGNHVTIT--PDLSKAPSSEILPIKFGG 137
Query: 644 ITNVVKPGNRIFIDDGLIS--------IICQSVSADTLTCTIENGGML-GSRKGVNLPGI 796
+ VK G+ +FI L + + S + + C + N L G +++
Sbjct: 138 LAKAVKKGDTLFIGQYLFTGSETTSSWLEVVETSGENVECLVTNTATLAGPMFTLHVSKA 197
Query: 797 PVDLPAVSEKDKSDL-LFGVEQGVDMIFASFIRNGAXLHEIRGILGEKG 940
V LP +S+ DK + +G+ VD+I S R+ + E+R L G
Sbjct: 198 HVSLPTLSDYDKEVISTWGLHNSVDIISLSHTRSAEDVRELRSFLQSHG 246
Score = 43.2 bits (97), Expect = 4e-04
Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +1
Query: 940 EEHQIISKXENHQGMVN*NXIIXESDGIMVARGXLGIXIPXKR-YPXPKNMIAKC 1101
++ QI +K EN +G+ + + I+ E+DG++++RG LGI +P + + K I KC
Sbjct: 248 QDTQIYAKVENTEGLDHFDEILQEADGVIISRGDLGIDLPPEDVFISQKTAIKKC 302
>03_05_0640 - 26326832-26327166,26327295-26327529,26327665-26327908,
26328389-26328507,26328860-26329050,26329133-26329220,
26331653-26331715,26331816-26333944,26334084-26334186
Length = 1168
Score = 46.0 bits (104), Expect = 6e-05
Identities = 32/124 (25%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Frame = +2
Query: 587 SSDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISI-ICQSVSADTLTCTIENGGML 763
+S ++ + T++V++ + + G+ + ID G+ + + + V D L C + G+L
Sbjct: 773 TSKRTDESHPFTMHVNFDKFSEDILVGDELVIDGGMATFEVIEKVGND-LRCKCTDPGLL 831
Query: 764 GSRKGVNL--PGIPVD----LPAVSEKDKSDLLFGVEQGVDMIFASFIRNGAXLHEIRGI 925
R ++ G V+ LP +S KD +D+ FG+ +GVD I SF+++ + ++
Sbjct: 832 LPRAKLSFWRNGKLVERNFGLPTLSAKDWADIEFGIAEGVDCIALSFVKDANDIKYLKTY 891
Query: 926 LGEK 937
L K
Sbjct: 892 LSRK 895
Score = 43.6 bits (98), Expect = 3e-04
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +1
Query: 934 KGEEH-QIISKXENHQGMVN*NXIIXESDGIMVARGXLGIXIPXKRYP 1074
K EH +I +K E+ + + N II SDG+MVARG LG+ IP ++ P
Sbjct: 895 KSLEHIKIFAKVESLESLKNLKDIIEASDGVMVARGDLGVQIPLEQIP 942
>02_01_0510 + 3703715-3705040
Length = 441
Score = 30.3 bits (65), Expect = 3.2
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 465 HPSLWPSHWTLKD 503
HP LWP HW +KD
Sbjct: 192 HPFLWPDHWPVKD 204
>02_02_0168 + 7364410-7365153
Length = 247
Score = 29.9 bits (64), Expect = 4.2
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 698 SIICQSVSADTLTCTIENGGMLGSRKGVNLPGIPVDLPAVSEKDKSDLLFG 850
S+ Q+ SA T +NGG+ G+ + V+LP + E D ++L+FG
Sbjct: 138 SLTVQADSAAAAFLTPKNGGVSGAGAADDELEAIVELPRLDELDAAELVFG 188
>08_02_1064 -
24033941-24034127,24034432-24034476,24035355-24035421,
24035521-24035600,24035691-24035769,24035864-24035939
Length = 177
Score = 29.5 bits (63), Expect = 5.5
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +2
Query: 356 GMNVARMNFSHGSHEY--HAETIRNCREAEKSYSAKLGSPFSLAIALDTKGPEIRTGLLE 529
G NV N +Y +AE IR R E+ ++ SP+ L L G E+ T +
Sbjct: 79 GRNVDGRNIMVQFAKYGPNAEPIRKGRIIEEVEKSRDSSPWDLWYLLFQSGTEMTTEIEN 138
Query: 530 GGGSAEVELKKGETI 574
G E +KG +
Sbjct: 139 AGAEVAAEAEKGMAV 153
>07_01_0989 +
8348706-8348882,8348988-8349028,8350071-8350120,
8350502-8350646,8351570-8351626,8352141-8352261,
8352436-8352945,8353242-8353289
Length = 382
Score = 29.1 bits (62), Expect = 7.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 537 PPPSKSPVLISGPLVSNAMAKEKGEPSL 454
PPP+ SP L S P+ S +++EK +L
Sbjct: 335 PPPNPSPSLASAPVYSPVLSREKVRDAL 362
>05_05_0050 + 21916020-21916489,21916906-21917380,21917472-21918278
Length = 583
Score = 29.1 bits (62), Expect = 7.3
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Frame = -3
Query: 697 DEAIIDEDSVSWLHDIRY------VLVVHVNCISIA---FLLIIRTCRQLYSLSLLQFDF 545
+E I ++ WLHD+ L H+ +++ L+ + C+ L SL + DF
Sbjct: 165 EECSIADNGTEWLHDLAVNNPVLETLNFHMTELTVVPADLELLAKKCKSLISLKISDCDF 224
Query: 544 S*AAAFQEPSSDLRSFS 494
S F ++ L+ F+
Sbjct: 225 SDLIGFFRMAASLQEFA 241
>10_08_0625 + 19362303-19363853
Length = 516
Score = 28.7 bits (61), Expect = 9.7
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +2
Query: 539 SAEVELKK--GETIKLTTSSDYQEKGNADTIYVDYKNITNVVKPGNRIFIDDGLISIICQ 712
+A E KK GET K T E DT+ +D K + + GNR DD +I + +
Sbjct: 256 NARREYKKHGGETTKTTNKETTLEHSYVDTL-LDIK----LPEDGNRALTDDEIIKLCSE 310
Query: 713 SVSADTLT 736
++A T T
Sbjct: 311 FLNAGTDT 318
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,653,627
Number of Sequences: 37544
Number of extensions: 508819
Number of successful extensions: 1519
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1499
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3689769684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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