Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_D07
         (1281 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.67 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   2.1  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   6.3  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.9 bits (59), Expect = 0.67
 Identities = 23/80 (28%), Positives = 25/80 (31%), Gaps = 4/80 (5%)
 Frame = +1

Query: 622 PPPXXLXKXXPPFXGGXXPXGFXXSRGFPX----ENPPXXPPXPTXAVXXXPXXFXPLGX 789
           PPP  L +   PF     P       GFP     + PP  PP P       P    PLG 
Sbjct: 549 PPPLNLLRA--PFFP-LNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGG 605

Query: 790 XGPXXXPPRXXXXXGXGXPP 849
                 P       G   PP
Sbjct: 606 PAGSRPPLPNLLGFGGAAPP 625


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +2

Query: 452 PGPXXSGXGXGXPPPQGGXSGXPXXRG 532
           PG    G G G P   GG SG P   G
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGG 226


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.6 bits (51), Expect = 6.3
 Identities = 16/50 (32%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
 Frame = +2

Query: 476 GXGXPPPQGGXSGXPXXRGXP-RXKXXXQRXXKGPXPXKGPXGGXXPXGP 622
           G    P + G SG P  RG P           +G    KG  G   P GP
Sbjct: 595 GYAGEPGRPGASGVPGERGYPGMPGEDGTPGLRGEPGPKGEPGLLGPPGP 644


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 812,890
Number of Sequences: 2352
Number of extensions: 13976
Number of successful extensions: 41
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 147148920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)